|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77226_cuf0 >transcript:BL77226_cuf0-protein ID=transcript:BL77226_cuf0-protein|Name=transcript:BL77226_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=481bp
MPSLVSLYTVYIVCLSILLPISRTVYSSSHSTHECIGQLCKHEINDGSWI
IVKTKHVPKMCITMGQYCLSTLFPHVPITKSKQHLSYANCDCPVKVVMCV
LILLCGDIDTNPGPTDLHLPKKGIHLGHLNICSWKNKIHELQGLLDQNSF
HILALTETHLDSSVNDNELCPDGWSVVRKDRNRHGGGVAFLIRDGFSWKE
RNELENDKIEMLWLEVNVPRSKPMLISCIYRPPGSSIQYFDGILDAIDNA
TDANKEVFVLGDFNVDWSNSECSLKERLAQTAVRCNLSQTVTDPTRIAVN
RRNHRTATCIDLAFTNCQEKCTSAKSTPVGFSDHNIIYLTRKTKAPKTQP
RVVYKRSYSKFHPDDFQHDISMVPWHIVYDESDVNEALDVFTTMFCNVAD
QHAPVRKRTVRSNPAGWLDDELREIMRLRDDARREALATGLASDLSIYKK
LRNTAVKLNRKKKAAFFKSKIAESRNNPKEM Run BLAST on NCBI mRNA from alignment at Sc0000255:92614..94768+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77226_cuf0 ID=transcript:BL77226_cuf0|Name=transcript:BL77226_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2155bp|location=Sequence derived from alignment at Sc0000255:92614..94768+ (Branchiostoma lanceolatum)
GTCATCATGATGGCTCCACATACCAAAATTTCTCAGTAAGTGTTTGTAGT
CTTTAATCTGCTAAAATCGACCATCCAGAGTTTTTGTCATCCCACAATTT
TCTTATCACTACATGTGGAACATATCTATGCAAAAATTTATAAAACTTCG
CAACTTTTGGTGCAGTTTTGGGGCCACTTTCTGCCGTACTCAAAATTGGG
GAGGGCGCCATCCTGCTGAGCTCTGTCACCTCTGCTTCCAGCTGAGAGGT
ACTGACCGAGCCAATAACCTTCTATATTTACTGAATCTGTGTGCTACCGG
GAAGTAGGTACGCTGTTTCATATCCAGTTTGCCATNGTTTCCCATTTGCC
ACTTGTTTTGTGCTGGCTTGGTGCATCGGACAGCGCCTCTCCGCTCATGC
TAAGGTAATGTTTGGTTAGGTTAAGGCAGTTGTATGATGTAACGTTAACT
GTGCTTTTAACTGACGTGTATAACTGTGTTTTCAAACTTGGAAAATCCAA
CTCATCCTGTGTATATTTCAGTTATCAGGCATTAGGAGCATTTTCGGTAA
CACAGAACCTACTCTTTTTAATTGAATTAAGTAACCAGCTTTTAGATACT
AATTTTAAGGTTATATGTCTATCACTGTTGTTATACTTGTGTAGCTAGTT
AAGAGTAAGAGATTAGTTGCTGCTATTGAATGCTACAAACACCGAAGATT
TGCAAGTAAAATGCCGTCGCTCGTCAGCCTGTACACAGTATACATAGTAT
GTCTTTCAATCTTGCTACCAATATCCAGAACTGTGTATAGCTCATCTCAT
AGCACACATGAATGTATCGGTCAGTTATGTAAACACGAGATTAATGATGG
TTCTTGGATTATTGTAAAAACTAAGCATGTACCAAAGATGTGTATAACAA
TGGGCCAGTACTGTCTAAGTACACTGTTCCCACATGTGCCAATCACGAAA
AGTAAACAACACCTGAGTTATGCAAATTGCGATTGTCCAGTTAAAGTAGT
CATGTGTGTGTTGATACTACTTTGTGGAGACATAGATACCAATCCAGGTC
CAACAGACTTACACTTACCTAAAAAGGGAATTCACCTGGGCCATCTGAAC
ATTTGTAGCTGGAAAAACAAAATCCACGAACTGCAGGGATTACTGGACCA
GAACAGTTTTCACATTCTTGCACTGACTGAAACACACCTGGACTCGAGTG
TAAACGACAATGAACTGTGCCCCGATGGGTGGTCAGTGGTCAGGAAGGAT
CGTAATCGGCATGGAGGGGGTGTGGCCTTTCTAATACGAGACGGGTTCTC
TTGGAAAGAAAGAAATGAACTGGAAAATGATAAGATCGAGATGTTGTGGC
TAGAGGTTAATGTGCCACGGTCCAAACCAATGCTGATTAGCTGTATTTAC
AGACCACCTGGATCCTCCATTCAGTATTTCGACGGCATCCTGGATGCCAT
TGACAACGCAACAGACGCGAACAAAGAGGTCTTCGTACTAGGGGACTTTA
ATGTTGACTGGTCCAACTCAGAGTGTTCACTGAAGGAACGTTTAGCACAA
ACTGCAGTAAGATGCAACCTTTCTCAAACGGTGACAGACCCTACCAGGAT
TGCAGTTAACAGGAGGAATCATAGAACGGCTACCTGCATTGATCTGGCTT
TTACAAACTGCCAGGAAAAGTGCACATCAGCTAAATCAACGCCTGTGGGA
TTTTCAGACCACAACATCATCTACTTGACAAGGAAAACTAAGGCCCCAAA
GACTCAACCACGTGTAGTCTACAAAAGGTCCTACAGCAAGTTCCACCCAG
ACGACTTTCAACACGACATCAGTATGGTGCCTTGGCACATTGTATATGAC
GAGTCAGACGTAAATGAAGCACTGGACGTCTTTACAACAATGTTCTGCAA
CGTAGCTGATCAACATGCTCCCGTCAGAAAACGTACTGTTAGATCTAACC
CGGCAGGTTGGCTGGACGACGAACTCAGAGAAATAATGAGGCTCAGGGAT
GACGCCAGAAGGGAAGCCCTTGCGACAGGCCTTGCTTCAGATTTGAGTAT
ATACAAGAAACTAAGGAATACAGCTGTCAAACTAAACCGGAAAAAGAAAG
CTGCGTTTTTCAAATCTAAAATAGCGGAGTCCAGAAACAACCCGAAGGAA
ATGTG Coding sequence (CDS) from alignment at Sc0000255:92614..94768+ >transcript:BL77226_cuf0 ID=transcript:BL77226_cuf0|Name=transcript:BL77226_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1443bp|location=Sequence derived from alignment at Sc0000255:92614..94768+ (Branchiostoma lanceolatum)
ATGCCGTCGCTCGTCAGCCTGTACACAGTATACATAGTATGTCTTTCAAT
CTTGCTACCAATATCCAGAACTGTGTATAGCTCATCTCATAGCACACATG
AATGTATCGGTCAGTTATGTAAACACGAGATTAATGATGGTTCTTGGATT
ATTGTAAAAACTAAGCATGTACCAAAGATGTGTATAACAATGGGCCAGTA
CTGTCTAAGTACACTGTTCCCACATGTGCCAATCACGAAAAGTAAACAAC
ACCTGAGTTATGCAAATTGCGATTGTCCAGTTAAAGTAGTCATGTGTGTG
TTGATACTACTTTGTGGAGACATAGATACCAATCCAGGTCCAACAGACTT
ACACTTACCTAAAAAGGGAATTCACCTGGGCCATCTGAACATTTGTAGCT
GGAAAAACAAAATCCACGAACTGCAGGGATTACTGGACCAGAACAGTTTT
CACATTCTTGCACTGACTGAAACACACCTGGACTCGAGTGTAAACGACAA
TGAACTGTGCCCCGATGGGTGGTCAGTGGTCAGGAAGGATCGTAATCGGC
ATGGAGGGGGTGTGGCCTTTCTAATACGAGACGGGTTCTCTTGGAAAGAA
AGAAATGAACTGGAAAATGATAAGATCGAGATGTTGTGGCTAGAGGTTAA
TGTGCCACGGTCCAAACCAATGCTGATTAGCTGTATTTACAGACCACCTG
GATCCTCCATTCAGTATTTCGACGGCATCCTGGATGCCATTGACAACGCA
ACAGACGCGAACAAAGAGGTCTTCGTACTAGGGGACTTTAATGTTGACTG
GTCCAACTCAGAGTGTTCACTGAAGGAACGTTTAGCACAAACTGCAGTAA
GATGCAACCTTTCTCAAACGGTGACAGACCCTACCAGGATTGCAGTTAAC
AGGAGGAATCATAGAACGGCTACCTGCATTGATCTGGCTTTTACAAACTG
CCAGGAAAAGTGCACATCAGCTAAATCAACGCCTGTGGGATTTTCAGACC
ACAACATCATCTACTTGACAAGGAAAACTAAGGCCCCAAAGACTCAACCA
CGTGTAGTCTACAAAAGGTCCTACAGCAAGTTCCACCCAGACGACTTTCA
ACACGACATCAGTATGGTGCCTTGGCACATTGTATATGACGAGTCAGACG
TAAATGAAGCACTGGACGTCTTTACAACAATGTTCTGCAACGTAGCTGAT
CAACATGCTCCCGTCAGAAAACGTACTGTTAGATCTAACCCGGCAGGTTG
GCTGGACGACGAACTCAGAGAAATAATGAGGCTCAGGGATGACGCCAGAA
GGGAAGCCCTTGCGACAGGCCTTGCTTCAGATTTGAGTATATACAAGAAA
CTAAGGAATACAGCTGTCAAACTAAACCGGAAAAAGAAAGCTGCGTTTTT
CAAATCTAAAATAGCGGAGTCCAGAAACAACCCGAAGGAAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000255 | genome | Sc0000255:92614..94768 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77226_cuf0 |
| Biotype | protein_coding |
|
