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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77112_cuf0 >transcript:BL77112_cuf0-protein ID=transcript:BL77112_cuf0-protein|Name=transcript:BL77112_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=221bp
DEEKDLQVVVDQEDEDQTNTSQDKDRESQEGVDDQETKDSSEDPAQENEI
PDSNLPLPGKEDATGKLVDPMSYFEKLHAVLQWQQTTIGALQSRLAAQEE
RVDQLEMAADDHDFQMETCQERVSSLEQLQAELSDTVLDYYTKVSDVEQQ
KNMEQDGNIAKQGELILEVDKRVQQQTTRAEKQEEAIGALRVALVHFWES
YVKPSLTDGNEKDKQKLTKDK Run BLAST on NCBI mRNA from alignment at xfSc0003155:623..1945- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77112_cuf0 ID=transcript:BL77112_cuf0|Name=transcript:BL77112_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1323bp|location=Sequence derived from alignment at xfSc0003155:623..1945- (Branchiostoma lanceolatum)
GATGAAGAGAAGGACCTTCAAGTGGTTGTTGACCAAGAGGATGAAGATCA
GACCAATACAAGCCAAGATAAGGACAGGGAGTCTCAAGAGGGTGTTGATG
ATCAAGAGACGAAGGATTCTTCAGAGGATCCTGCTCAAGAGAATGAAATC
CCCGATTCAAACCTTCCACTTCCAGGCAAAGAGGATGCGACTGGAAAACT
TGTGGATCCCATGTCGTACTTCGAGAAACTGCACGCCGTCCTGCAATGGC
AGCAGACCACCATTGGTGCGCTACAAAGCAGGCTGGCAGCCCAGGAAGAA
AGGGTGGACCAACTGGAGATGGCAGCCGACGACCATGACTTTCAGATGGA
GACCTGCCAGGAAAGGGTCTCATCTTTGGAGCAGCTGCAGGCGGAACTCA
GCGACACCGTTCTTGACTACTACACCAAAGTGAGCGACGTAGAACAACAG
AAAAACATGGAGCAGGATGGAAACATAGCCAAACAGGGGGAGCTGATTCT
AGAGGTAGACAAGAGGGTCCAACAGCAGACAACAAGAGCAGAGAAGCAGG
AGGAGGCTATAGGAGCACTCAGGGTGGCGCTAGTCCACTTCTGGGAGTCC
TACGTGAAGCCTTCACTGACTGACGGTAATGAAAAGGATAAGCAGAAACT
TACGAAGGATAAATGAATTGCAAATGAGAAAGAGGGCAATCAGGAAGAGT
TTGTTGACCAACAAGATCCTCAAGAAGAAGTAGACAAACAAGAATAGATT
GATGCAAGCAAAGATGAAGAAAATTGGTCTTGGTGTTTATAAATTATGAA
TGGAGTTGTGACAGGGGTTAACATATCTTATTTTTGAACTTTTGGGCTTT
AGGGTTGAAAAAAAATCTTGCCTAACTTGTACACTTCAGTGTAACCACAG
TGTTTCATACTGAACTTCTCTGACAGCAGGAGTTCCATACTCAATTTGTG
TATGAGAGAGTAAGTGTGCACTGATGACTGGTTCCTGCAACTCTCTATCT
GATTGTACAAATCAGAATTACTTTTGGTACATGCAGTTCACCTTTTTATC
CCAGATATTGTTCATCGATACCAGAATCTTTTTTGTTTTTTGTCAACAAT
AACAGCCCCCTCATTGCAATTCACTTCTAGTTTATAATTACTTGCATAAT
GCATGGAACATACATGTACCTGTATCTGTGCTCAAAGCAAATGTACCAAA
TAAGAACATTACCTTGTTGATAATGGGTTATGGTAAAGAGGTAAGGTTAT
TGATTGTTAAGTTACAATAAGTAGGCAGTATGTTATAAGACTGATAAACA
TTTATCATTATCATTAATTAACA Coding sequence (CDS) from alignment at xfSc0003155:623..1945- >transcript:BL77112_cuf0 ID=transcript:BL77112_cuf0|Name=transcript:BL77112_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=666bp|location=Sequence derived from alignment at xfSc0003155:623..1945- (Branchiostoma lanceolatum)
GATGAAGAGAAGGACCTTCAAGTGGTTGTTGACCAAGAGGATGAAGATCA
GACCAATACAAGCCAAGATAAGGACAGGGAGTCTCAAGAGGGTGTTGATG
ATCAAGAGACGAAGGATTCTTCAGAGGATCCTGCTCAAGAGAATGAAATC
CCCGATTCAAACCTTCCACTTCCAGGCAAAGAGGATGCGACTGGAAAACT
TGTGGATCCCATGTCGTACTTCGAGAAACTGCACGCCGTCCTGCAATGGC
AGCAGACCACCATTGGTGCGCTACAAAGCAGGCTGGCAGCCCAGGAAGAA
AGGGTGGACCAACTGGAGATGGCAGCCGACGACCATGACTTTCAGATGGA
GACCTGCCAGGAAAGGGTCTCATCTTTGGAGCAGCTGCAGGCGGAACTCA
GCGACACCGTTCTTGACTACTACACCAAAGTGAGCGACGTAGAACAACAG
AAAAACATGGAGCAGGATGGAAACATAGCCAAACAGGGGGAGCTGATTCT
AGAGGTAGACAAGAGGGTCCAACAGCAGACAACAAGAGCAGAGAAGCAGG
AGGAGGCTATAGGAGCACTCAGGGTGGCGCTAGTCCACTTCTGGGAGTCC
TACGTGAAGCCTTCACTGACTGACGGTAATGAAAAGGATAAGCAGAAACT
TACGAAGGATAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003155 | genome | xfSc0003155:623..1945 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77112_cuf0 |
| Biotype | protein_coding |
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