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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77036_cuf0 >transcript:BL77036_cuf0-protein ID=transcript:BL77036_cuf0-protein|Name=transcript:BL77036_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=131bp
MNPPSVGKKSKSKRRYVPVRGDDRDSLSRLHSAYYPNPRLHYSSYPDPRL
LQLNHPDPRLTEGNQSYLWHHNSSLFSQSSHVQFAALPSPDFPPCLPAPE
EENMDWEPSIYTENMTWSSSQMDEEIPMEWD Run BLAST on NCBI mRNA from alignment at xpSc0039681:61642..63441+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77036_cuf0 ID=transcript:BL77036_cuf0|Name=transcript:BL77036_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1800bp|location=Sequence derived from alignment at xpSc0039681:61642..63441+ (Branchiostoma lanceolatum)
GTTTGACAGCCGCGTGCTCTACCACTTACGCCACACGACGCCACATAAGA
CATAGCTGATACTCTAAAACATACTTTCTATCAAATTTTCTGAACTGGCT
TATCCCAACTGTTAACTCAGAACACAGAGCTATGAAAAACTGTGTGAAAA
ACTACGAGTCTGCCTTAACCGTCTACAATGTTCTGGAACAGTATTACCAA
ACAATCGCCCCCTTGCTCGTGGTAACCGAATTGTTTATCGTTCGATAAAC
ACACCTGCAGTCTGTTCGTCAAGACTAGTGTCCTTGAACCGTACGTATAA
CGTACGATGGCTGGCAAACGAGGATACGTGGCTTAAATGAATCCCCCATC
TGTAAGTAGATTTCAAGTCATGTTGAATCAGTTCTGTAGTACAATGCGAA
ACTTTCTTCCAACACTAATGTATACACGGATCAATTTTTCGACGACCACT
GTCGCCTTTTGCAGGATCACAACTATCAACCGAGTGCTTATTGATCCGTA
GTAGGCGACAGTAGTCGTCGAAAATGTGATCCGTGTAAACATTAGTGTTA
GAGGAAAGTTTGGCATTATACTATGATTTCTACCGACCCATCACGTAGTA
AACAACACTTATTCAAATTATCATGGAAGTTTTGTTTACTTCGTGATGTA
GACCATTCCTGTCGCTTGTAAACATCGACCTGTTGTTGGAACTTGTAAAT
AAGAATGTACTCTAGCTTTGCCATCTGTGTGTTGAATCAATGATACCCAA
TGATTGTTTTCCTAATGATGATGCCATGATCTTTGGGACGCGTATTTTCT
TTGTATTTGATTTGAGTGAAACAGGTGCATCAATGAATATATGACTGCAG
TGTCTTCATTCTATGCTTTAGCTCTTCAATGTTATTTTGTTATCATTTCT
TGGCGTGGGGTAAGAACAAGTCACGTAGTCTAGGCATAAAGAGAGATAAA
TGAGTGATGTAGTCTTTTCATGTTCAAACAGGTGGGGAAAAAGTCAAAGT
CAAAGAGGAGATATGTCCCAGTTCGTGGGGATGACAGGGACTCGTTATCA
CGGCTCCATTCGGCATACTATCCGAACCCAAGACTCCATTACTCGAGTTA
TCCGGACCCCAGGCTTCTCCAGCTCAACCATCCGGACCCGAGGCTCACCG
AGGGCAACCAGTCGTACCTGTGGCATCACAACTCTTCACTGTTCAGTCAG
AGTTCTCATGTTCAGTTCGCAGCCTTGCCTTCTCCCGACTTCCCACCGTG
TCTGCCTGCTCCGGAAGAAGAAAACATGGACTGGGAGCCCAGCATCTACA
CTGAGAACATGACGTGGTCAAGCAGCCAGATGGACGAGGAAATTCCCATG
GAATGGGACTGAAAAACTAGAAAAGCTAGTTGGACGGCAGGTGACGGGTA
CGAGTAGTGGCCTAAGACGACAGAGCTGGCCAAGAAAGAGCAGCCAACAA
AGAAACGGAGACGACTTTATTCCGGCACATGGAATGGGAAAAGCTCGGTG
AATGGAGAGGGACTAACTGATCAAAGTTAGCAGGACGACAGGTGAATGTA
ACATGGTAACAAGGTATATAAGACGAACAAAAGTTGTTGGTGGCCGAACA
GGAAACAGAAAATACTTTATTTCCGTGGCACATAGCAAAGACCGCCTGTG
TTTTCTTTTAGTTTTAGAGTGTATTGTGAAAGGGTGTTTAGTTTTGCTTT
CTATGTTTTGCAAAGGAATTTACATCGATACATATTGCATCGTTGGTGTA
AGATATTCGTTGTTGACCTGATGTAGAACTGAATTATGCAACGAACTGCA
Coding sequence (CDS) from alignment at xpSc0039681:61642..63441+ >transcript:BL77036_cuf0 ID=transcript:BL77036_cuf0|Name=transcript:BL77036_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at xpSc0039681:61642..63441+ (Branchiostoma lanceolatum)
ATGAATCCCCCATCTGTGGGGAAAAAGTCAAAGTCAAAGAGGAGATATGT
CCCAGTTCGTGGGGATGACAGGGACTCGTTATCACGGCTCCATTCGGCAT
ACTATCCGAACCCAAGACTCCATTACTCGAGTTATCCGGACCCCAGGCTT
CTCCAGCTCAACCATCCGGACCCGAGGCTCACCGAGGGCAACCAGTCGTA
CCTGTGGCATCACAACTCTTCACTGTTCAGTCAGAGTTCTCATGTTCAGT
TCGCAGCCTTGCCTTCTCCCGACTTCCCACCGTGTCTGCCTGCTCCGGAA
GAAGAAAACATGGACTGGGAGCCCAGCATCTACACTGAGAACATGACGTG
GTCAAGCAGCCAGATGGACGAGGAAATTCCCATGGAATGGGACTGAATGA
ATCCCCCATCTGTGGGGAAAAAGTCAAAGTCAAAGAGGAGATATGTCCCA
GTTCGTGGGGATGACAGGGACTCGTTATCACGGCTCCATTCGGCATACTA
TCCGAACCCAAGACTCCATTACTCGAGTTATCCGGACCCCAGGCTTCTCC
AGCTCAACCATCCGGACCCGAGGCTCACCGAGGGCAACCAGTCGTACCTG
TGGCATCACAACTCTTCACTGTTCAGTCAGAGTTCTCATGTTCAGTTCGC
AGCCTTGCCTTCTCCCGACTTCCCACCGTGTCTGCCTGCTCCGGAAGAAG
AAAACATGGACTGGGAGCCCAGCATCTACACTGAGAACATGACGTGGTCA
AGCAGCCAGATGGACGAGGAAATTCCCATGGAATGGGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039681 | genome | xpSc0039681:61642..63441 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77036_cuf0 |
| Biotype | protein_coding |
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