transcript:BL76994_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL76994_cuf0
Unique Nametranscript:BL76994_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL76994_cuf0

>transcript:BL76994_cuf0-protein ID=transcript:BL76994_cuf0-protein|Name=transcript:BL76994_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=119bp
AMIRHGHVPTVLLKVILIPIIKKQNLNPSIRNNYRPIAISSPIFKLFESL
LLTRLEKHLASPANQFGFKTHHGTDMCIFALKEIISYFKRRGSPVFVCFL
DASKAFDRVNHYTLFKKLI
Run BLAST on NCBI

mRNA from alignment at Sc0000209:28590..28948-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL76994_cuf0 ID=transcript:BL76994_cuf0|Name=transcript:BL76994_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=359bp|location=Sequence derived from alignment at Sc0000209:28590..28948- (Branchiostoma lanceolatum)
CAGCCATGATTAGGCATGGTCATGTCCCCACTGTTTTACTGAAGGTCATC
CTTATTCCAATAATCAAAAAGCAAAATTTGAACCCTTCTATTAGGAATAA
TTACCGTCCTATCGCCATCTCCAGCCCAATCTTTAAATTATTCGAATCCC
TTCTTCTTACACGCCTCGAGAAGCACCTGGCCTCCCCTGCAAATCAGTTT
GGGTTTAAAACACACCATGGAACTGACATGTGTATCTTTGCTCTCAAAGA
GATCATTTCTTATTTCAAACGCCGAGGTTCGCCTGTCTTCGTTTGTTTTC
TTGACGCCTCTAAAGCGTTTGATAGGGTAAACCACTACACACTGTTCAAG
AAGTTAATC

Coding sequence (CDS) from alignment at Sc0000209:28590..28948-

>transcript:BL76994_cuf0 ID=transcript:BL76994_cuf0|Name=transcript:BL76994_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=357bp|location=Sequence derived from alignment at Sc0000209:28590..28948- (Branchiostoma lanceolatum)
GCCATGATTAGGCATGGTCATGTCCCCACTGTTTTACTGAAGGTCATCCT
TATTCCAATAATCAAAAAGCAAAATTTGAACCCTTCTATTAGGAATAATT
ACCGTCCTATCGCCATCTCCAGCCCAATCTTTAAATTATTCGAATCCCTT
CTTCTTACACGCCTCGAGAAGCACCTGGCCTCCCCTGCAAATCAGTTTGG
GTTTAAAACACACCATGGAACTGACATGTGTATCTTTGCTCTCAAAGAGA
TCATTTCTTATTTCAAACGCCGAGGTTCGCCTGTCTTCGTTTGTTTTCTT
GACGCCTCTAAAGCGTTTGATAGGGTAAACCACTACACACTGTTCAAGAA
GTTAATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL76994gene:BL76994Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL76994_cuf0-E1BL76994_cuf0-E1-1564476830-389499Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL76994_cuf0transcript:BL76994_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000209genomeSc0000209:28590..28948 -
Properties
Property NameValue
Transcript idBL76994_cuf0
Biotypeprotein_coding