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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76954_cuf0 >transcript:BL76954_cuf0-protein ID=transcript:BL76954_cuf0-protein|Name=transcript:BL76954_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=298bp
VLFMNPLEGKYISCSYKPEDLPPVAGVTVTCDNDIYILKDDMEPEDDKQL
SMYKYNHAENVWQHTGMSSVSSFLWSSDEDWITYQEDLIEVDRILYYLGI
EIRNDSTLVKMRKYNWQTDQWQDGSLLQFNETLHHSSALPCGSYIFFLTN
EEVHRYDPTQNQWSKRTTPTLIPKVGVTAAIGTEIFCTDLSDNQTMVYDT
ESDNWQELKSLPTSHSSIRNAWHFVMENQLYLVLGVFKFNTVKQKQEIDY
HVYMYDKSADSWRDMKVAVTSNAYANEYELMCPVARMYLPYLGAHAKP Run BLAST on NCBI mRNA from alignment at Sc0000624:29306..30894- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76954_cuf0 ID=transcript:BL76954_cuf0|Name=transcript:BL76954_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1589bp|location=Sequence derived from alignment at Sc0000624:29306..30894- (Branchiostoma lanceolatum)
AGGTTCTCTTCATGAACCCTCTGGAAGGGAAGTACATCAGCTGCAGTTAC
AAACCTGAAGACCTTCCCCCTGTCGCTGGGGTTACAGTCACATGTGATAA
TGATATCTACATTCTTAAAGATGATATGGAGCCGGAGGATGATAAGCAGT
TATCCATGTATAAGTACAACCATGCAGAGAATGTGTGGCAACATACTGGT
ATGTCCTCTGTATCTTCATTTCTTTGGTCTTCAGATGAAGATTGGATTAC
CTACCAGGAGGACCTTATTGAAGTTGATCGGATTTTATACTACCTTGGAA
TTGAAATTAGAAATGACAGCACATTGGTGAAGATGAGAAAGTACAACTGG
CAAACAGACCAATGGCAGGACGGTTCACTGCTGCAGTTTAACGAAACTTT
ACACCACTCTTCAGCACTGCCCTGTGGTTCATACATCTTTTTCCTCACAA
ACGAGGAGGTGCATCGCTACGACCCAACCCAGAACCAATGGAGTAAGCGG
ACCACACCGACACTCATTCCTAAAGTCGGCGTAACCGCTGCCATAGGAAC
AGAGATCTTTTGCACAGACCTATCTGATAATCAGACTATGGTGTACGATA
CAGAGTCAGACAACTGGCAGGAACTGAAAAGCTTGCCAACCTCTCATAGC
AGTATTAGAAATGCCTGGCATTTTGTAATGGAGAATCAGCTGTATTTGGT
GTTAGGAGTCTTTAAGTTTAACACTGTGAAACAAAAGCAAGAAATAGACT
ATCATGTATATATGTATGACAAGTCTGCTGATTCCTGGAGAGATATGAAG
GTTGCTGTGACTTCCAATGCATATGCCAATGAGTATGAGTTAATGTGCCC
TGTGGCACGTATGTACCTACCATATCTTGGTGCACATGCGAAACCCTAGA
AGCTTAGATTTGCCTAGATGTGTTTTTTAGATCACTGTTGTATCTGGAGG
CTATGAACTAGCACTGATTTCATGAGGAGGTACGCAGTCTCTCCATGGAT
CAGCAGACCTGTCCAGGGCTGGAAATGCTGGGTGCATGTTCATCCAACAT
TAGAGCTGTGCACCTAAATGTTTGACCGTGGGTGCACTTAGATATCTTAT
ATACCTAAGTAGAGTTTGGCGATCCCATACCTTCGCCAAAAGGTGTTAAC
TTGTACGAAATATGTATTTGAAAGGTGTGTTATAGATTGCATACTTAATG
TATGATGATGTTCATCTTCATTTGATTTGCATATGCATATACACGTATCA
AATTTCTGTTATTTACAACTTTGGAATCATAGCATTTTCTCATCAATTAA
GCAAATTATGTCCATATTTTCAAAATTGATATATCAATCGGTTTTCCTCT
CTAAGCCACAGATCTCAGTTCATATGTCTTCAAGCGCCATTGTAAATAGC
ACTGCCCACATGGTAACGTTAACCCCAACATGTGGGTAGTGTCCTCGTAT
ATAGGTGTCCTTGTATATAGGTCGTCATTAAAAAAATAGCAAATTGAAAG
GGAATTACAGCTTTTCCTCATTAATCATGTAAAGAAGCACCTGATTAGCA
TAGAATTATGCTGATCATCCCTAATAGTTTCTACTTGCC Coding sequence (CDS) from alignment at Sc0000624:29306..30894- >transcript:BL76954_cuf0 ID=transcript:BL76954_cuf0|Name=transcript:BL76954_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=897bp|location=Sequence derived from alignment at Sc0000624:29306..30894- (Branchiostoma lanceolatum)
GTTCTCTTCATGAACCCTCTGGAAGGGAAGTACATCAGCTGCAGTTACAA
ACCTGAAGACCTTCCCCCTGTCGCTGGGGTTACAGTCACATGTGATAATG
ATATCTACATTCTTAAAGATGATATGGAGCCGGAGGATGATAAGCAGTTA
TCCATGTATAAGTACAACCATGCAGAGAATGTGTGGCAACATACTGGTAT
GTCCTCTGTATCTTCATTTCTTTGGTCTTCAGATGAAGATTGGATTACCT
ACCAGGAGGACCTTATTGAAGTTGATCGGATTTTATACTACCTTGGAATT
GAAATTAGAAATGACAGCACATTGGTGAAGATGAGAAAGTACAACTGGCA
AACAGACCAATGGCAGGACGGTTCACTGCTGCAGTTTAACGAAACTTTAC
ACCACTCTTCAGCACTGCCCTGTGGTTCATACATCTTTTTCCTCACAAAC
GAGGAGGTGCATCGCTACGACCCAACCCAGAACCAATGGAGTAAGCGGAC
CACACCGACACTCATTCCTAAAGTCGGCGTAACCGCTGCCATAGGAACAG
AGATCTTTTGCACAGACCTATCTGATAATCAGACTATGGTGTACGATACA
GAGTCAGACAACTGGCAGGAACTGAAAAGCTTGCCAACCTCTCATAGCAG
TATTAGAAATGCCTGGCATTTTGTAATGGAGAATCAGCTGTATTTGGTGT
TAGGAGTCTTTAAGTTTAACACTGTGAAACAAAAGCAAGAAATAGACTAT
CATGTATATATGTATGACAAGTCTGCTGATTCCTGGAGAGATATGAAGGT
TGCTGTGACTTCCAATGCATATGCCAATGAGTATGAGTTAATGTGCCCTG
TGGCACGTATGTACCTACCATATCTTGGTGCACATGCGAAACCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000624 | genome | Sc0000624:29306..30894 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76954_cuf0 |
| Biotype | protein_coding |
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