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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76867_cuf0 >transcript:BL76867_cuf0-protein ID=transcript:BL76867_cuf0-protein|Name=transcript:BL76867_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=121bp
AIYKTSPMMLFQTHSCLSLLMVGTTFAKITNKLIVAHITKSQMSILDSSM
IGPGLLLLNQCFNCFVDEYILLWITLIFVTLDLAQYCFAICSQICEHLDI
YCFSITSKPSTKGLKGKNNTR Run BLAST on NCBI mRNA from alignment at Sc0000111:3357..6289+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76867_cuf0 ID=transcript:BL76867_cuf0|Name=transcript:BL76867_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2933bp|location=Sequence derived from alignment at Sc0000111:3357..6289+ (Branchiostoma lanceolatum)
GCCATCTACAAGACGTCACCCATGATGTTGTTCCAGACCCATTCCTGCCT
CTCCCTGCTCATGGTCGGAACAACCTTTGCGAAAATCACCAACAAACTCA
TAGTGAGTGTTAATTACATGTAAAACATATAACTTATGGTAGTTGGAATA
TCAAAAGTACCAATCATGCATATTTGGAATCGTTAGCATCTGGCTATCTG
GTAAAATGTCTGTCCTACCACTGGAAAGAGATATTAACGTAGTGTACAAG
GTACTCCAAAATGAAAAGGTACATTAAAATGAAAACAAATCTCTCTATCA
GATGTCACTCGAAAACAGAAAAAAACACAGACTATGTATGATGTACAATA
TGACTTCTACATGACTACAATGAATCCAATATCAAGTCAGAAAAGAAACA
GTCATACAAAATTATCGCAGCTGCGTGCCAAAGCAATGTTTGAGGCATCA
AAAATTTAGTTTGTCCTATGATTGACATAGCCTGGGTGCCATCCTAATTT
CTACCGGGGCTCCTACACTCGCTACCCTCAAAAAATGAGGGTAGCGAGTG
TAGGAGCCCCGGTAGAAATTAGGATGGCACCCAGGCTATGATTGACATGG
ATTAGAACTCGTTACCACGTAGTACAGCAGGCACATACTTACGACAGGCT
TTAAACAGGTTTAGGTACAAAGGCTAGGTGTGACAGGTCGTTCAGTGTGA
TACAACTAGCTGCAGTAACTCTGGCGTGTTACCCGATGTGTGCTCTGTCA
CGTACACGTTCGTTGCTTTTGAAACGGTCGTCACTTTTTTACGTGTAGCA
CGCTCCGTCACTTTAAAGGCAACCCCAGCAATATCAGGGCCCGAAAGTCG
GATTTTGAAAGTCAAGTTTTTTAGTAATTTCAATACATGATTTGTTCATA
CAACACTATTATAATGTATGGCAACGTCCATGACGCAAAATTACGACGTT
GTTGTGATGTGAGAACTCACTGAAAATCGTAGCTGGAGTTTTTGTAGGGT
CGCAAAACTAAGGGGATAATCGTGCGGCACGATTTTGCGCGGCTTTAAAG
TACTCAAAGTATGAAGTTATTACGCAAATGTGCTGTACAAAGCTCGTAAA
TGTCATGTCCATAAAGATTTCAGCATTCTTTTTAGTTTCCATTTTTTCGG
CCCTATAAATATTTCTTTGATTGCCTTTAGCACGCTCTGTCTACACCGTG
ATGTATCGTGGCGTAGTTGATAATGAATTAAAGTTTACTAACTAATATGC
TTTTTGACAACAATTTCAACCTATGCAGGTGCACTTTTATAATGTGTTTA
CCATTCAGCACCATACTGTTAGTTTGCAATTAGAAGTTGCACTGATACAC
AGTTGACTCAAGGCGTGTATTGAAGGTAATGATTTTGCCAATGAAAAATT
AGACTTCTGAAGCTGTTTGATTGTGTATACATTCAGGTATGCTACAATCC
AACCGTGCGTATGTGTACTGTACATGTATGTATGTTACAAACAAGCCGTT
TGTATGTGTGCTGTACATATATGTATGTTACAATCAGCTGCGCATATTAA
TGAAAAGCTGTTTTATGACACAGCTCTTGGGTTCTTTGGTTCTCCAGGTT
GCACACATTACAAAAAGTCAGATGTCGATATTGGACTCATCGATGATTGG
CCCTGGCTTGTTGCTCCTGAACCAGTGCTTCAACTGCTTCGTCGATGAGT
ACATCCTTCTCTGGATAACTTTGGTAAGCAGTGACACTAAATATGTAGAT
ACATGGCGATTGCACTTCGTAGCTGTTGCTATTAGTTAACCCTCATAAAC
CCTAAAATGTTTTTGCTAACGAACTGAAGGAATATTAACATGGGGTTCTA
AGGGATCTCATAATGTTTTGTTCAGTATTATCTTCATTTTGAATTGTTCC
CGCTTTACATACATTGCTGCATTCTTCTATCATAAAAGAGGCACATTTTG
ATATGGTTAGGTGTGAATGATAATGTTCATTGTCGTCATTGATACAAAAT
ATTTAGGAGGACCACGTTTTGCACTAACGGTACTATTTTGATTATCTATA
ACTTTGCCCCTCACTATTCAACAAAATACAGTAAAATAATTATGATAACA
AACTTCATAGTATCAAAATAATTCTACTTCGAAGAATACATATAGAGAAA
AACTAAAAAATGCCATGATGCGGGCCCAATCGGACTCAACCCATACTTTG
GTATTGTGCCAATATCCTAAAGAAATCTAGACAGCTTATAATAAAGTTTT
ACTGACAAAGTCGCGAACATTCACTGCACGAAATGGCCTCGGATCCTGAC
GTATCCTGAAGTATCCTGACGTGATCCGGAACCTAAGATCAGGAAGAATC
CGAACGGATCCGGGGCCGTATATTTCTCGGCAGGATAATGGGCATCCAAA
TATTGGGACTCAAGGTAGTCCACTTACACAACTTGTGTAAGTACGTACTT
ACAAAACTCAAATATGCAAGTGGTACCATGAGTCACAAAATTTGGATACC
CATTAGCCTGACGAGAAATATACCGTCCTGGATCTGTTCGGATTCTTCCG
GATCTTAGGTTCCGGATCACGTCAGGATACTTCAGGATACGACAGGATCC
GAGGCCATTTCGTGCCGTGATTTATTTGAAGAATCCAGTTGATATATGTT
GTATTCATTGTAAATCTTCTCTGGCTGTTTGTGACCTTTTACATACTTAT
GTGATCTCTTTCAGATATTTGTGACGCTTGACCTGGCCCAATACTGTTTC
GCTATATGCTCCCAAATTTGCGAGCACCTTGACATCTACTGCTTCAGTAT
AACGAGCAAGCCGTCAACAAAGGGACTGAAAGGAAAGAACAACACCCGCT
AGCACAGCACTGCAAACAAGGAATAGGCGAGGTGAATTTAATATGGAGTT
CAGTTGTGTGTAGATTGGGGGGACATGTGGCTA Coding sequence (CDS) from alignment at Sc0000111:3357..6289+ >transcript:BL76867_cuf0 ID=transcript:BL76867_cuf0|Name=transcript:BL76867_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000111:3357..6289+ (Branchiostoma lanceolatum)
GCCATCTACAAGACGTCACCCATGATGTTGTTCCAGACCCATTCCTGCCT
CTCCCTGCTCATGGTCGGAACAACCTTTGCGAAAATCACCAACAAACTCA
TAGTTGCACACATTACAAAAAGTCAGATGTCGATATTGGACTCATCGATG
ATTGGCCCTGGCTTGTTGCTCCTGAACCAGTGCTTCAACTGCTTCGTCGA
TGAGTACATCCTTCTCTGGATAACTTTGATATTTGTGACGCTTGACCTGG
CCCAATACTGTTTCGCTATATGCTCCCAAATTTGCGAGCACCTTGACATC
TACTGCTTCAGTATAACGAGCAAGCCGTCAACAAAGGGACTGAAAGGAAA
GAACAACACCCGCTAGGCCATCTACAAGACGTCACCCATGATGTTGTTCC
AGACCCATTCCTGCCTCTCCCTGCTCATGGTCGGAACAACCTTTGCGAAA
ATCACCAACAAACTCATAGTTGCACACATTACAAAAAGTCAGATGTCGAT
ATTGGACTCATCGATGATTGGCCCTGGCTTGTTGCTCCTGAACCAGTGCT
TCAACTGCTTCGTCGATGAGTACATCCTTCTCTGGATAACTTTGATATTT
GTGACGCTTGACCTGGCCCAATACTGTTTCGCTATATGCTCCCAAATTTG
CGAGCACCTTGACATCTACTGCTTCAGTATAACGAGCAAGCCGTCAACAA
AGGGACTGAAAGGAAAGAACAACACCCGCTAGGCCATCTACAAGACGTCA
CCCATGATGTTGTTCCAGACCCATTCCTGCCTCTCCCTGCTCATGGTCGG
AACAACCTTTGCGAAAATCACCAACAAACTCATAGTTGCACACATTACAA
AAAGTCAGATGTCGATATTGGACTCATCGATGATTGGCCCTGGCTTGTTG
CTCCTGAACCAGTGCTTCAACTGCTTCGTCGATGAGTACATCCTTCTCTG
GATAACTTTGATATTTGTGACGCTTGACCTGGCCCAATACTGTTTCGCTA
TATGCTCCCAAATTTGCGAGCACCTTGACATCTACTGCTTCAGTATAACG
AGCAAGCCGTCAACAAAGGGACTGAAAGGAAAGAACAACACCCGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:3357..6289 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76867_cuf0 |
| Biotype | protein_coding |
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