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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76848_cuf0 >transcript:BL76848_cuf0-protein ID=transcript:BL76848_cuf0-protein|Name=transcript:BL76848_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=456bp
MLTNMEFKKQQYLLNKCERLLTLCFFMYLAFITHSYVSTMPGSLSQLIGY
NRTEVSHSDYEVENVSLIQRSALPRYDNFVPSDSKQFYKTWHVEASTLPV
KKSPEHKKIIIWNPAAVWPTLGAIPCMSLPQCEFVKMKIKLNNRKRKKIK
TEDADAIIFRGIYHIPPVYSRNWFPKTRPEHQVWIYFPFDCPPITRGIDL
NSYAGVFNWTMSYRNDSDILAPWGHITTTYKALTETPPAPNKDYAMEKNK
LVIWYVSDCYKYQTRFIYAAELIKHIQVDVFGACGNVSGSCKKDRQDRAC
VKEHVRPYKFYLAFENFKCVEYITEKFWHNSLDYDIVPVVLGAPKDHYER
VVPPNSFIHVDDFESPEALANYLKYLDQNDDKYNEYFAWKTKPPQTLTDF
ESRFCEVCKKLLEASPTERKVYTDVDKWWNGENFEVCEETVWDGALRAAK
NAKHFP Run BLAST on NCBI mRNA from alignment at Sc0000153:726881..731405- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76848_cuf0 ID=transcript:BL76848_cuf0|Name=transcript:BL76848_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4525bp|location=Sequence derived from alignment at Sc0000153:726881..731405- (Branchiostoma lanceolatum)
CTAACGTCCAGCAATGAACCGTGTTGGCATAGTTGAATCAAGACATAGAC
GTCACTGATCTATAGCATTCATTTTGGAACAAAATGAGCTGAAATTCGGC
ATGGAGACAGAGTTGATATCCTCGGAAATCTCTTTTATACATATAACACG
TTATGTATTTTAAAATGTTTTTGGGCAGACGATTTTTGGCATGTTCCATT
TTTTTCACGTAGGGATTTTGGAACAGTCAACTTTTTCAAGGGAGAGATAT
GGAGTGAAATATGCACGCGCAAATAGCGCCGGGTATATACACAAAAGTGG
CCAAACAAACCATAATACGTGTGGGGGGGGGGTATCTTAATCGAAGGCTC
ATGCAAGTTACATCTGTATCCAAATACTGGGATAAGGTTGATAATTTAGT
TAAGTTATTCATCATGCGAAAACTACAGTGGCTAGCTAGTCCAGCTGTCT
TCAAAACTAGTTGTCTACATCCAAATCGCCCGAACCCGTCTAGCCAGTTT
CACAACCCCAACGATTCTACAGACGACATGCCGACCGTCGCTGAGAAAGT
CTTGTCTTGGCTGAGCTGTCTTGCAGTCTACCATTGGTGAGGATAAAGAT
TGTTTTACTTCTGCATGTTACAAAATAGTAACACAGTGTCAGCATTTACT
TATGGAGGAAATACCAGTAGCATCACCCCACGGCCCCGTTTCTTGGACAT
GTGGGTCACTTTAGAAATAGTGTAGACAACTCCGTCAACTAGCACACGCT
TCCAGTAGAAGCCATGCTCTGTAGAGAACATTTGCCTAGAAGGTTATGTT
TCGGTTATGTTTTATGTGTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGTGTATGTGT
CTGTGTGTCTGTGTGTGTCTGTGTGTGTGTATGCCTGTGTGTATGTGTGT
GTATGTGTGTGTGTGTATTTGTGTGCGCGTGTATGTGTTTGTGTGTGTTT
GTGTGTGTGTATGTGTGTGTATGTGTGTGTGCGTGTATGTGTGTGTGTGT
GCGTGTATGCGTGTGTGTGTGTATATCTGTGTGTATGTGTGTATTTGTGT
GTGTGTATCTGTGTGTGCGTGTATGTGTGTGTGTATGTGTGTGTGTGTGT
TTGTGTGTATGTGTGTGTGTGTGTGTGNTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG
TGTGTGTATGCCTGTGTGTATGTGTGTGTATGTGTGTGTGTGTATTTGTG
TGCGCGTGTATGTGTTTGTGTGTGTTTGTGTGTGTGTATGTGTGTGTATG
TGTGTGTGCGTGTATGTGTGTGTGTGTGCGTGTATGCGTGTGTGTGTGTA
TATCTNGATAAATTGGATGCCTCCGTTTCAGGATTCTGCACTCACACCTT
GTGTGGTTGAAGATGTTGGAAGTGTTGGTTTCCGGTAGATGACCCATCAG
TCTACGTAGCTGACCCACTTACAGAAAAGAAATGTAATTTTCAAATCTGG
AAAGCATACATTGTTTGGTATGTGNTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTTTGGTATGTGTGTGTGTGTTTGGTATGTGTGTGT
GTGTGTGTGTGTGTGTGTTTGTTGCTGGCTGCCTGTCTGTCTGTCTGTCT
GTCTGTCTATTTGTAAACACGATAGCTTGAGAAAGCCTAAATGGATTATC
TTGACAATATGTATGAGGTTAGGTCTTGATGACACCTTGACATGATAATA
TTCTGGGCCCCCTAGCAGGTTGCTATGGCACTGCAGAAGAACTTCCACTA
TCTGTATATTTTGATCCGAAAGATGGTACGGTCACTAAATTGGAGTAGTA
CGTAGCTTTTCTGCACGGGAGTTGTCTACTCTACCTGTCAAAACACTGAC
TGGTTCTGATTAATGGCCTAATCCATACATCATTCCTCTTTGTTTCAGAC
ATCAGTACAATCCCACGCTGATTGGACAGCGTTATGTTCCGATGGAATCC
TTCTTCTCAACACTGAACTATATCTTATACTGAAGGTCATCACGTGGATA
GGCCGATTGTCACAAAAAGCAAGCTGACACATCGATAGTAGCCGACCCAA
CAGGAGAAGATCCGACCCTTTCACATGTTAAGATCCACTCAGACCGAGAT
GGACCCTTACTCTCATTGATAAGTGTGGGTTTTTTATCGTGTCGAGGTGT
GGCTTTTCTAAAAATATCCCATCCAAGGGAAATCAAACGTCCTTAGCCAA
GCCAAGCTACTCATTTTCACCTGACTGAAATGTGCAAACTCGTATGATGA
CGCAACGTCCGGGTATGTTAGGATTTGAACCCAGGACCTCTGGATTCTAA
GTCAAACTCTCAGTGGACGCCACATTGCCTCGTCACGCCACATTGGTTGA
ACATTTTTGAATTCACATCAACTAATGCTTACCAATATGGAGTTCAAAAA
GCAACAATACCTTTTGAACAAGTGCGAACGTCTTCTGACATTATGTTTCT
TCATGTATCTTGCGTTCATCACACATAGTTATGTATCAACGATGCCGGGG
AGCCTAAGTCAGTTGATTGGTTACAACAGGACTGAAGTTTCCCACAGTGA
CTATGAAGTTGAAAACGTGTCTCTCATTCAGCGCTCTGCACTCCCCAGAT
ACGACAACTTCGTTCCTTCTGATTCTAAGCAATTCTACAAAACCTGGCAC
GTAGAAGCCTCGACTCTTCCAGTTAAGAAGTCACCAGAACACAAGAAAAT
CATCATTTGGAACCCGGCTGCCGTATGGCCAACTCTAGGGGCTATACCGT
GTATGTCGCTGCCTCAGTGTGAATTCGTTAAGATGAAAATTAAGTTGAAT
AACAGGAAGCGAAAAAAGATTAAGACAGAAGATGCTGATGCCATCATTTT
CCGAGGGATATATCACATACCTCCAGTTTACAGCAGAAACTGGTTTCCTA
AGACACGACCCGAGCATCAGGTTTGGATCTATTTTCCGTTTGACTGTCCG
CCTATCACAAGAGGCATCGACTTGAATTCTTATGCAGGAGTCTTCAACTG
GACGATGTCGTATAGAAATGATTCAGACATTCTAGCGCCATGGGGTCATA
TCACCACGACTTACAAAGCACTGACTGAAACCCCACCTGCTCCCAACAAA
GACTACGCAATGGAGAAAAATAAGCTAGTCATTTGGTATGTCAGTGATTG
CTACAAATATCAAACTCGGTTTATATATGCAGCTGAATTGATCAAGCACA
TCCAAGTGGACGTTTTTGGAGCCTGTGGAAATGTTAGCGGCTCATGTAAG
AAAGATAGGCAAGATCGGGCATGTGTAAAAGAACACGTACGCCCGTACAA
ATTCTATTTGGCATTTGAAAATTTTAAATGCGTTGAGTATATAACAGAAA
AGTTCTGGCATAATTCCCTTGATTATGACATCGTTCCCGTCGTATTGGGA
GCTCCAAAGGATCATTATGAAAGAGTTGTTCCACCGAACTCTTTTATTCA
TGTAGATGACTTCGAATCCCCAGAGGCATTGGCAAACTACTTGAAGTATC
TGGACCAAAACGACGATAAATATAACGAATATTTTGCTTGGAAAACTAAA
CCTCCACAGACCCTCACAGACTTTGAATCCAGATTTTGTGAAGTTTGTAA
GAAACTTCTTGAGGCGTCCCCGACGGAGAGAAAGGTGTACACGGACGTAG
ACAAGTGGTGGAACGGTGAAAACTTTGAGGTCTGTGAAGAAACGGTCTGG
GATGGTGCACTTAGGGCTGCAAAGAATGCAAAACATTTCCCCTAGTGTCC
GACAAAATCTACAGGTATTACGTATACTGAAGGATAAACAATCATTCAGA
TAGAACATCACGTCATGTAAAATAAATTAAGCAACTGTGTTAATTTGCTT
TCTCGATGTGTGTCAGACCATTTAGAGAGCATCCACCATCGTTCATTATA
TATATATTAGTGACTGAGAATAAGGAGGTTCTTGGTTTCAACTGCGCATG
CTCTTCTGAGTCTAAACATAGATGCAGTCACACCACGGGCACACATCGAT
TCTCAATGGTGGGAAATATTGCGCTGCGCATGCTCAGTTAAAACCATGAA
TCTCTGAACACCGGTTCAACTGGTATACGAATGATTGATATGTAAATAAT
TATTGAAGAAAGCCAAGCTAGTAGCTATTACAAGACCTAGCCTATTGTAT
TTTGCACTAAATGAGAACTAAATTTATATTCTATCAAAGTGTAGATGGCA
AAGATGTTGTTTTCCTGTGTTTATGATTTTGTCTTGTACAACTTTAGGGG
CCATATATCCACACAGGTGCCATGCTAATCGGAGCCAGTCGTTGGATATT
GTGAATGATAGAATGTGAAATCTAGCTAGCTAAGCGTTCTACATTTGACT
ATTTCATCGTGAAGAAATGTATCAAAGATGACAATTTAGCCTTGAAGGAC
TGTCATTAAAATCACAAACAATATG Coding sequence (CDS) from alignment at Sc0000153:726881..731405- >transcript:BL76848_cuf0 ID=transcript:BL76848_cuf0|Name=transcript:BL76848_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1371bp|location=Sequence derived from alignment at Sc0000153:726881..731405- (Branchiostoma lanceolatum)
ATGCTTACCAATATGGAGTTCAAAAAGCAACAATACCTTTTGAACAAGTG
CGAACGTCTTCTGACATTATGTTTCTTCATGTATCTTGCGTTCATCACAC
ATAGTTATGTATCAACGATGCCGGGGAGCCTAAGTCAGTTGATTGGTTAC
AACAGGACTGAAGTTTCCCACAGTGACTATGAAGTTGAAAACGTGTCTCT
CATTCAGCGCTCTGCACTCCCCAGATACGACAACTTCGTTCCTTCTGATT
CTAAGCAATTCTACAAAACCTGGCACGTAGAAGCCTCGACTCTTCCAGTT
AAGAAGTCACCAGAACACAAGAAAATCATCATTTGGAACCCGGCTGCCGT
ATGGCCAACTCTAGGGGCTATACCGTGTATGTCGCTGCCTCAGTGTGAAT
TCGTTAAGATGAAAATTAAGTTGAATAACAGGAAGCGAAAAAAGATTAAG
ACAGAAGATGCTGATGCCATCATTTTCCGAGGGATATATCACATACCTCC
AGTTTACAGCAGAAACTGGTTTCCTAAGACACGACCCGAGCATCAGGTTT
GGATCTATTTTCCGTTTGACTGTCCGCCTATCACAAGAGGCATCGACTTG
AATTCTTATGCAGGAGTCTTCAACTGGACGATGTCGTATAGAAATGATTC
AGACATTCTAGCGCCATGGGGTCATATCACCACGACTTACAAAGCACTGA
CTGAAACCCCACCTGCTCCCAACAAAGACTACGCAATGGAGAAAAATAAG
CTAGTCATTTGGTATGTCAGTGATTGCTACAAATATCAAACTCGGTTTAT
ATATGCAGCTGAATTGATCAAGCACATCCAAGTGGACGTTTTTGGAGCCT
GTGGAAATGTTAGCGGCTCATGTAAGAAAGATAGGCAAGATCGGGCATGT
GTAAAAGAACACGTACGCCCGTACAAATTCTATTTGGCATTTGAAAATTT
TAAATGCGTTGAGTATATAACAGAAAAGTTCTGGCATAATTCCCTTGATT
ATGACATCGTTCCCGTCGTATTGGGAGCTCCAAAGGATCATTATGAAAGA
GTTGTTCCACCGAACTCTTTTATTCATGTAGATGACTTCGAATCCCCAGA
GGCATTGGCAAACTACTTGAAGTATCTGGACCAAAACGACGATAAATATA
ACGAATATTTTGCTTGGAAAACTAAACCTCCACAGACCCTCACAGACTTT
GAATCCAGATTTTGTGAAGTTTGTAAGAAACTTCTTGAGGCGTCCCCGAC
GGAGAGAAAGGTGTACACGGACGTAGACAAGTGGTGGAACGGTGAAAACT
TTGAGGTCTGTGAAGAAACGGTCTGGGATGGTGCACTTAGGGCTGCAAAG
AATGCAAAACATTTCCCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000153 | genome | Sc0000153:726881..731405 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76848_cuf0 |
| Biotype | protein_coding |
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