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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76787_cuf0 >transcript:BL76787_cuf0-protein ID=transcript:BL76787_cuf0-protein|Name=transcript:BL76787_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=183bp
DDKAKLMFNMYDVDRDGKLTKEDFKNMLRSMMEMVNTVVEQDQLNQLVDA
MMEAGGVSDQEVLTLQDFVGILGDQKHALNRAGLHMDLPDNIKIPDTKVV
GPRPGLRRESTIIRVNQVHQAYNNEAGELRRRHTLVPTGSEPERRLRFGT
KSKIYTANKLSQRINSFTSKVQNNKLQIFWMTL Run BLAST on NCBI mRNA from alignment at Sc0000002:4576086..4579035- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76787_cuf0 ID=transcript:BL76787_cuf0|Name=transcript:BL76787_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2950bp|location=Sequence derived from alignment at Sc0000002:4576086..4579035- (Branchiostoma lanceolatum)
GTGACGACAAGGCCAAGTTGATGTTCAACATGTATGACGTCGACCGAGAC
GGGAAACTCACCAAGGAGGACTTCAAGAACATGCTCAGGTGAAGGGCAGA
AACTTCTAAACAATAATAATAATAACCTTTATTGTACATTCATGCCCTAT
CACGGGCTAAGTACAGGCATATGGATACAAAATACATGGTAACGTTCATA
TGATGACACTGACAGGACTTCTAATACTAATCTAAAACAATGGATCTATG
ACTACCCTAATTCATAGGTTCGGCTTACAATGCAGTACTTACTTTAAAAC
CACTTTTATCACAACTCTCTAGTGAATATTCGACCGGGGCCGTCTGAACA
ACGATTTGAATGGCTCCTACAGTAACGTTAAACGCAGCTGACTCCAGTTA
ATAGTCACCGATGACTTCAAGGATTTGTAAAAAGAGTATAAGTATGGTGT
AGTTTGGAGCCTACATATTCAATACAAACTATCAGAAAAAAAAGTTCTGT
CACATTGCAGTTCGGGGATGTCCCTATAGCTCAGCTAGTAGCAATCCCAC
AATTTCTATTAGTTGCTTACCGAGAGACCCTGGTTCAATCGTGGGAAGGG
TATATCAGTTGGGGCTGCACCCATCTTTTGGTAGGGACGTAAAATGGGGG
TATTGTGTTCGGGGATGTGTCTCGAGTACGTCAAAGAGGACGGCACTACA
AGGGTCTAAACTAACGAACGAACATTGCAGGTCGATGATGGACATGGTGA
ATACCAGCTTGTGGACTTGATGATAGAAAAGAGTGGGATAACAGAATGGA
AAATCAATTAAACAAAAAAAACAAATAAACAAACAACTGTTTACCTTGCA
GGTCTATGATGGAGATGGTGAACACAGTGGTTGAACAGGACCAGTTGAAC
CAGCTGGTGGACGCCATGATGGAAGCCGGAGGGGTGAGTGACCAGGAGGT
TCTGACACTCCAGGACTTCGTCGGCATCCTTGGCGACCAAAAACACGCCC
TCAACCGGGCGGGGCTTCACATGGATCTACCAGGTGGGACGTCTTGATGT
CTATCAGCAGATTTTCATGTCTTAATTGTTAAGTTAGAATCCTCCCACAC
CATTATTGATGTATAGGGTGGTGCACATCTCTGGTTCATAGCCCAGGGGC
AACACTGTGGTGCAATCACTGCAGCAGGGGGCTAGTCCAAAGGCAGTGGA
GTGTGTTTAACTTCCATACTGTTTCAGAAGTATGTACCATTTTTATAAAG
TCTTTGGTATGACCCAATGCGCCTCTTGTCCAGAAGTGTCCTAACCCGGG
GCTTGAACCCGGGCCTTCTGGTCCAAGTAATTTGAACCAGATGTGGCAAG
TACCAGAAGCGCAGACCACTACACCACAGAGACACTCCGGTCTTAATTGT
AAGCCTATTAATTCAGCCTCTGGGCTGCCATGAGGCCTGTATGTGTTTGT
TGCATAAACCTGCCATTGCACAAAACACCCCCCTCCCAACGATATACTGC
GAAAATTGCCAATACTTAACAAATTGGAAATCTGTAGAGAATTTTTCTGA
GAATATAACATTTCTGATATTGTAAGCTTCGAGGAAGATGAAGCTTCGAT
GAGAGTTGGGCACGATGTTCTGTTATGGCACACCAACTCGCACTCTTACT
ATTTACTTATGAAAAGTATGGTGGTTGATGTTCTAGTGTGTGCAGGCTGA
CTGTAGTTTTGTGGCCCAACGTTACTTCCATACTGTGTGGTTTTCCTAAA
CTAGCATCACTATTGGGGTTCAAAATACCACCAATAAATTATCCCTCAAA
GTTGTAATCTAAGAGTGGAATTGCTACAACAGTCAACACTAAGCTGTACA
CTGTGGTTTTTGTTAACAGTTACTTTACTTATTGTGAAAATCTTGAGTTC
TTATCTCTTCTTTGTTCCTTTTGCAGACAATATCAAGATTCCTGACACCA
AAGTTGTTGGGCCCAGACCAGGCTTGCGGAGAGAGAGTACAATCATTCGG
GTGAACCAAGTCCACCAAGCCTACAAGTAAGTGGCAAAACAATTGTTATG
TTACCAGCAAATAATGGCATCCACATGCCAAAACTTAATGCCAATATACT
AGACTGATATGTTGGAAGATGGGGAAGGGGTACAACTAGCATTTTTACCG
TCTCAACTAACATTTTCACTGTCTCAACTATCATTTTCACCGTCTCAACT
ATCATTTTCACCGCGTCTCAACTAACATTTTTACCGTCTCAACTAACATT
TTCACCCGCTACGTTTCCTTGCACTCCATCATTTATCTATATTTTTCGGT
TTTCTTTTACAGAGTGGCTCTCTCAATGACTGAGCACTGATTTGCAGATA
GGCCCTGGGTACATAAATACAGACAAGACAACAAAAATTACAAAACAAAG
ACAGATTTGTTAATTGAATTCCACAATTTTTATCCATAATTTAGTATTCT
TTATCCATGCCAGGTCATTATGACTGGAGGTATGTTTGCAGGCATTTACA
TTGTCAATGCAAGAAAGTCAAGAAAAAGAAAGAATTATTTTCAAAAACTC
TAGATATTTCATAATTGTGCTCATGGGGTCTCTGAACTCTTGTCATGAAA
GTCGTATATTATCTTTTCAACAGTAACGAAGCTGGTGAGCTACGGCGTTG
CCACACACTGGTGCCAACAGGCTCCGAACCAGAACGACGGCTGCGGTACA
TGTTTGGAGCGTTCACATTTTCCATGCATGAAATATGAATTTATATGTTG
CTTTTCCTGTTTCCATAGTAACGAAGCTGGGGAGTTACGGCGTCGTCACA
CACTGGTACCGACAGGGTCCGAACCAGAACGGAGGCTGCGGTTCGGCACG
AAGTCCAAGATCTACACCGCCAACAAGCTGAGTCAGCGCATCAACAGCTT
CACGAGCAAGGTGCAGAACAACAAGCTGCAGATCTTCTGGATGACGCTGT
Coding sequence (CDS) from alignment at Sc0000002:4576086..4579035- >transcript:BL76787_cuf0 ID=transcript:BL76787_cuf0|Name=transcript:BL76787_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2196bp|location=Sequence derived from alignment at Sc0000002:4576086..4579035- (Branchiostoma lanceolatum)
GACGACAAGGCCAAGTTGATGTTCAACATGTATGACGTCGACCGAGACGG
GAAACTCACCAAGGAGGACTTCAAGAACATGCTCAGGTCTATGATGGAGA
TGGTGAACACAGTGGTTGAACAGGACCAGTTGAACCAGCTGGTGGACGCC
ATGATGGAAGCCGGAGGGGTGAGTGACCAGGAGGTTCTGACACTCCAGGA
CTTCGTCGGCATCCTTGGCGACCAAAAACACGCCCTCAACCGGGCGGGGC
TTCACATGGATCTACCAGACAATATCAAGATTCCTGACACCAAAGTTGTT
GGGCCCAGACCAGGCTTGCGGAGAGAGAGTACAATCATTCGGGTGAACCA
AGTCCACCAAGCCTACAATAACGAAGCTGGGGAGTTACGGCGTCGTCACA
CACTGGTACCGACAGGGTCCGAACCAGAACGGAGGCTGCGGTTCGGCACG
AAGTCCAAGATCTACACCGCCAACAAGCTGAGTCAGCGCATCAACAGCTT
CACGAGCAAGGTGCAGAACAACAAGCTGCAGATCTTCTGGATGACGCTGG
ACGACAAGGCCAAGTTGATGTTCAACATGTATGACGTCGACCGAGACGGG
AAACTCACCAAGGAGGACTTCAAGAACATGCTCAGGTCTATGATGGAGAT
GGTGAACACAGTGGTTGAACAGGACCAGTTGAACCAGCTGGTGGACGCCA
TGATGGAAGCCGGAGGGGTGAGTGACCAGGAGGTTCTGACACTCCAGGAC
TTCGTCGGCATCCTTGGCGACCAAAAACACGCCCTCAACCGGGCGGGGCT
TCACATGGATCTACCAGACAATATCAAGATTCCTGACACCAAAGTTGTTG
GGCCCAGACCAGGCTTGCGGAGAGAGAGTACAATCATTCGGGTGAACCAA
GTCCACCAAGCCTACAATAACGAAGCTGGGGAGTTACGGCGTCGTCACAC
ACTGGTACCGACAGGGTCCGAACCAGAACGGAGGCTGCGGTTCGGCACGA
AGTCCAAGATCTACACCGCCAACAAGCTGAGTCAGCGCATCAACAGCTTC
ACGAGCAAGGTGCAGAACAACAAGCTGCAGATCTTCTGGATGACGCTGGA
CGACAAGGCCAAGTTGATGTTCAACATGTATGACGTCGACCGAGACGGGA
AACTCACCAAGGAGGACTTCAAGAACATGCTCAGGTCTATGATGGAGATG
GTGAACACAGTGGTTGAACAGGACCAGTTGAACCAGCTGGTGGACGCCAT
GATGGAAGCCGGAGGGGTGAGTGACCAGGAGGTTCTGACACTCCAGGACT
TCGTCGGCATCCTTGGCGACCAAAAACACGCCCTCAACCGGGCGGGGCTT
CACATGGATCTACCAGACAATATCAAGATTCCTGACACCAAAGTTGTTGG
GCCCAGACCAGGCTTGCGGAGAGAGAGTACAATCATTCGGGTGAACCAAG
TCCACCAAGCCTACAATAACGAAGCTGGGGAGTTACGGCGTCGTCACACA
CTGGTACCGACAGGGTCCGAACCAGAACGGAGGCTGCGGTTCGGCACGAA
GTCCAAGATCTACACCGCCAACAAGCTGAGTCAGCGCATCAACAGCTTCA
CGAGCAAGGTGCAGAACAACAAGCTGCAGATCTTCTGGATGACGCTGGAC
GACAAGGCCAAGTTGATGTTCAACATGTATGACGTCGACCGAGACGGGAA
ACTCACCAAGGAGGACTTCAAGAACATGCTCAGGTCTATGATGGAGATGG
TGAACACAGTGGTTGAACAGGACCAGTTGAACCAGCTGGTGGACGCCATG
ATGGAAGCCGGAGGGGTGAGTGACCAGGAGGTTCTGACACTCCAGGACTT
CGTCGGCATCCTTGGCGACCAAAAACACGCCCTCAACCGGGCGGGGCTTC
ACATGGATCTACCAGACAATATCAAGATTCCTGACACCAAAGTTGTTGGG
CCCAGACCAGGCTTGCGGAGAGAGAGTACAATCATTCGGGTGAACCAAGT
CCACCAAGCCTACAATAACGAAGCTGGGGAGTTACGGCGTCGTCACACAC
TGGTACCGACAGGGTCCGAACCAGAACGGAGGCTGCGGTTCGGCACGAAG
TCCAAGATCTACACCGCCAACAAGCTGAGTCAGCGCATCAACAGCTTCAC
GAGCAAGGTGCAGAACAACAAGCTGCAGATCTTCTGGATGACGCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:4576086..4579035 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76787_cuf0 |
| Biotype | protein_coding |
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