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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76767_cuf2 >transcript:BL76767_cuf2-protein ID=transcript:BL76767_cuf2-protein|Name=transcript:BL76767_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=179bp
ECGLELDECSHDCTNTDGSYTCTCPAGYELHVNGKTCGDVNECASSPCQN
GGECQDGVDKYTCSCARGWFGTHCEEDIDECVLTNHGCEHQCVNTPGSYG
CSCPTGYVLSVDGKSCEDDDECHRDESLCSYICANTEGSYTCICQPGYSL
IPGTGECGNGPVTEHPGHSGATETPGHDK Run BLAST on NCBI mRNA from alignment at Sc0000056:1089146..1090564+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76767_cuf2 ID=transcript:BL76767_cuf2|Name=transcript:BL76767_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1419bp|location=Sequence derived from alignment at Sc0000056:1089146..1090564+ (Branchiostoma lanceolatum)
ACGAGTGTGGTTTAGAGCTCGACGAGTGTTCTCACGACTGTACCAACACG
GATGGTTCTTACACGTGTACATGTCCAGCAGGGTACGAACTCCACGTGAA
CGGAAAGACATGTGGTGGTAGGATTTTACAATGAGCCTTCCCTGAAACTT
CTGGGTACCTGCGTAACTATCAACTTTCTTGAATCAGATACTGTTTCTTT
CCAATCAAGGAGGTTATAATCATCCTTGGTCCAGTGAATTTTGCATTTTT
TTATCATTGCCATTGCTTACAGAATGAATACACTGTGGTATTCACAGTCT
CTTTGCTTTCCTACGATTATACTTAGAATCAGCCTGTTCACCCTCTTTAG
CTCGTCAGTAAGTCCGACCTTCTTTAAGTCCGGCCTACCTGACTGTATCC
TAATATCGTTACAACCTTTCAGACGTCAATGAGTGCGCCAGCTCCCCCTG
CCAGAACGGAGGTGAATGTCAAGACGGAGTCGATAAATACACATGTTCGT
GTGCCCGCGGTTGGTTTGGAACTCACTGCGAAGAAGGTATATCTTTGCTT
TATGAAATGTGAATCATTCCTGCCCCTCAGACTTCGTTGGTCTCAGTGTA
TCATCGTGTTTCATGTTTCCCGGATTCCTCACTTCTTGAATCTGATTGTT
TCAGACATAGACGAATGTGTCCTGACAAATCACGGCTGTGAGCACCAGTG
TGTGAACACCCCGGGAAGTTACGGCTGTTCCTGTCCCACAGGATACGTCC
TGAGTGTCGATGGCAAATCTTGCGAAGGTCAGTAAAACATCAGCCACTCC
TTTCGTGAAACTTTGTATCAGTTCATGTATACCGTTTTCCATGTAATATG
TTTGTGTGCATGCTTCTTTCTTGTTTTTTGTTTGTTTGTACGTGTAGCGT
AACTCCCCGGAGTGTTCTAAATACTGTGGCAGAGCGTATTTCTCAGCAGA
TAAAACTTTTTGTTTTCAGACGATGACGAGTGTCACCGGGATGAAAGTCT
GTGTTCATACATCTGTGCTAATACCGAGGGGAGCTACACGTGCATTTGTC
AGCCCGGCTATTCACTTATTCCCGGCACCGGTGAATGTGGTCAGTGTTCA
TTTCACTTAACTTCAGTATACAAATACCAGCTCTAGTACGCTCAAATCTT
ACGTCATGATAAATAAAAATGAACTATGGGACGTCTTAGTGAAAGCAAGG
AGTTAAAACCTCCTTGGTGAAAGCAATTGATATCCTCTTTTGCAGGAAAC
GGCCCTGTTACTGAACATCCGGGACACAGCGGGGCCACTGAAACTCCAGG
GCACGACAAGGCCACTGAACCTCAAGGGCACAACGAGGCTACTGAACCTC
AATGGCACAACGAGGCTACTGAACCTCAAGGGCACAACGAGGCAACTGAA
CCTCAAGGGCACAACGAGG Coding sequence (CDS) from alignment at Sc0000056:1089146..1090564+ >transcript:BL76767_cuf2 ID=transcript:BL76767_cuf2|Name=transcript:BL76767_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2685bp|location=Sequence derived from alignment at Sc0000056:1089146..1090564+ (Branchiostoma lanceolatum)
GAGTGTGGTTTAGAGCTCGACGAGTGTTCTCACGACTGTACCAACACGGA
TGGTTCTTACACGTGTACATGTCCAGCAGGGTACGAACTCCACGTGAACG
GAAAGACATGTGGTGACGTCAATGAGTGCGCCAGCTCCCCCTGCCAGAAC
GGAGGTGAATGTCAAGACGGAGTCGATAAATACACATGTTCGTGTGCCCG
CGGTTGGTTTGGAACTCACTGCGAAGAAGACATAGACGAATGTGTCCTGA
CAAATCACGGCTGTGAGCACCAGTGTGTGAACACCCCGGGAAGTTACGGC
TGTTCCTGTCCCACAGGATACGTCCTGAGTGTCGATGGCAAATCTTGCGA
AGACGATGACGAGTGTCACCGGGATGAAAGTCTGTGTTCATACATCTGTG
CTAATACCGAGGGGAGCTACACGTGCATTTGTCAGCCCGGCTATTCACTT
ATTCCCGGCACCGGTGAATGTGGAAACGGCCCTGTTACTGAACATCCGGG
ACACAGCGGGGCCACTGAAACTCCAGGGCACGACAAGGAGTGTGGTTTAG
AGCTCGACGAGTGTTCTCACGACTGTACCAACACGGATGGTTCTTACACG
TGTACATGTCCAGCAGGGTACGAACTCCACGTGAACGGAAAGACATGTGG
TGACGTCAATGAGTGCGCCAGCTCCCCCTGCCAGAACGGAGGTGAATGTC
AAGACGGAGTCGATAAATACACATGTTCGTGTGCCCGCGGTTGGTTTGGA
ACTCACTGCGAAGAAGACATAGACGAATGTGTCCTGACAAATCACGGCTG
TGAGCACCAGTGTGTGAACACCCCGGGAAGTTACGGCTGTTCCTGTCCCA
CAGGATACGTCCTGAGTGTCGATGGCAAATCTTGCGAAGACGATGACGAG
TGTCACCGGGATGAAAGTCTGTGTTCATACATCTGTGCTAATACCGAGGG
GAGCTACACGTGCATTTGTCAGCCCGGCTATTCACTTATTCCCGGCACCG
GTGAATGTGGAAACGGCCCTGTTACTGAACATCCGGGACACAGCGGGGCC
ACTGAAACTCCAGGGCACGACAAGGAGTGTGGTTTAGAGCTCGACGAGTG
TTCTCACGACTGTACCAACACGGATGGTTCTTACACGTGTACATGTCCAG
CAGGGTACGAACTCCACGTGAACGGAAAGACATGTGGTGACGTCAATGAG
TGCGCCAGCTCCCCCTGCCAGAACGGAGGTGAATGTCAAGACGGAGTCGA
TAAATACACATGTTCGTGTGCCCGCGGTTGGTTTGGAACTCACTGCGAAG
AAGACATAGACGAATGTGTCCTGACAAATCACGGCTGTGAGCACCAGTGT
GTGAACACCCCGGGAAGTTACGGCTGTTCCTGTCCCACAGGATACGTCCT
GAGTGTCGATGGCAAATCTTGCGAAGACGATGACGAGTGTCACCGGGATG
AAAGTCTGTGTTCATACATCTGTGCTAATACCGAGGGGAGCTACACGTGC
ATTTGTCAGCCCGGCTATTCACTTATTCCCGGCACCGGTGAATGTGGAAA
CGGCCCTGTTACTGAACATCCGGGACACAGCGGGGCCACTGAAACTCCAG
GGCACGACAAGGAGTGTGGTTTAGAGCTCGACGAGTGTTCTCACGACTGT
ACCAACACGGATGGTTCTTACACGTGTACATGTCCAGCAGGGTACGAACT
CCACGTGAACGGAAAGACATGTGGTGACGTCAATGAGTGCGCCAGCTCCC
CCTGCCAGAACGGAGGTGAATGTCAAGACGGAGTCGATAAATACACATGT
TCGTGTGCCCGCGGTTGGTTTGGAACTCACTGCGAAGAAGACATAGACGA
ATGTGTCCTGACAAATCACGGCTGTGAGCACCAGTGTGTGAACACCCCGG
GAAGTTACGGCTGTTCCTGTCCCACAGGATACGTCCTGAGTGTCGATGGC
AAATCTTGCGAAGACGATGACGAGTGTCACCGGGATGAAAGTCTGTGTTC
ATACATCTGTGCTAATACCGAGGGGAGCTACACGTGCATTTGTCAGCCCG
GCTATTCACTTATTCCCGGCACCGGTGAATGTGGAAACGGCCCTGTTACT
GAACATCCGGGACACAGCGGGGCCACTGAAACTCCAGGGCACGACAAGGA
GTGTGGTTTAGAGCTCGACGAGTGTTCTCACGACTGTACCAACACGGATG
GTTCTTACACGTGTACATGTCCAGCAGGGTACGAACTCCACGTGAACGGA
AAGACATGTGGTGACGTCAATGAGTGCGCCAGCTCCCCCTGCCAGAACGG
AGGTGAATGTCAAGACGGAGTCGATAAATACACATGTTCGTGTGCCCGCG
GTTGGTTTGGAACTCACTGCGAAGAAGACATAGACGAATGTGTCCTGACA
AATCACGGCTGTGAGCACCAGTGTGTGAACACCCCGGGAAGTTACGGCTG
TTCCTGTCCCACAGGATACGTCCTGAGTGTCGATGGCAAATCTTGCGAAG
ACGATGACGAGTGTCACCGGGATGAAAGTCTGTGTTCATACATCTGTGCT
AATACCGAGGGGAGCTACACGTGCATTTGTCAGCCCGGCTATTCACTTAT
TCCCGGCACCGGTGAATGTGGAAACGGCCCTGTTACTGAACATCCGGGAC
ACAGCGGGGCCACTGAAACTCCAGGGCACGACAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000056 | genome | Sc0000056:1089146..1090564 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76767_cuf2 |
| Biotype | protein_coding |
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