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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76705_cuf0 >transcript:BL76705_cuf0-protein ID=transcript:BL76705_cuf0-protein|Name=transcript:BL76705_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=649bp
FDCVEHNFMFKVLEKFNFGPNFIQWVKIIYTDCLASVINNGWKTASFQIQ
RGIRQGCPLSALLFLFVAEILFYSMQTNSNIKGIKVNEEEIKLCQVADDT
TVFLSTEESLHEALRCLRSFSSVAGPILNKAKTKGLWIGTWKTKKKDIGG
ITWPLTPIKSLGVYFGHCSKSLIKLNWEDKVKQIKTILNTWRQRNLTLFG
KITIVKSLAAAKVTYIMNVMPAPLSILKELNTAFFNFVWSGKGDKIKRKT
LVGNYDQGGLRMLDIYSVKDALLASWAKRICNGSGSWRHIPSHFLSAVMG
SVNLVFEMNWIEEKHLSELPIFYKQIIAAWQNANAVCTKPHTTENIQNQV
IWGNRHVLSQGKPLFYPHWIKSGFIYIKDILHNGKLLADKTCFQKLKVKR
NWACELLTLKQAIPRQWKCGTCNVSSKKSEALPTLYVLSAKKVKTVDTIK
TSDLYQNVVQQKFMSPYVEKKWEMFFECKFNWKNIWQNQINPTLGTHMSQ
TNYKILHEILPCGKLLYVWKNMSSKCNICNCVEDYKHLFLTCKCLTTFWK
NFCNVIYKCFKCTIEVSLIEIVLGYKTNHPYNTSEIYVTINLLICIAKKV
IFRNWCNNRNSDKYIPIDIFSIFKSEVNLLFNLVNNRNNRTCKHVLSNL Run BLAST on NCBI mRNA from alignment at Sc0000044:208556..210512+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76705_cuf0 ID=transcript:BL76705_cuf0|Name=transcript:BL76705_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1957bp|location=Sequence derived from alignment at Sc0000044:208556..210512+ (Branchiostoma lanceolatum)
TTTCGATTGTGTGGAACATAACTTTATGTTTAAGGTCTTAGAGAAGTTCA
ATTTTGGCCCCAACTTTATACAATGGGTCAAAATTATCTACACTGACTGC
CTAGCTTCAGTTATTAACAACGGGTGGAAAACAGCTAGCTTTCAAATTCA
GAGAGGTATAAGACAAGGATGCCCCTTAAGTGCCTTGCTTTTTTTATTTG
TGGCAGAAATCTTATTTTATAGTATGCAAACCAATAGTAACATTAAGGGT
ATAAAAGTGAATGAAGAAGAGATAAAACTCTGCCAAGTAGCTGACGACAC
TACAGTATTCTTATCAACAGAGGAATCACTACATGAGGCACTTAGATGTC
TTAGGTCATTCTCAAGTGTTGCTGGACCCATTCTAAATAAAGCCAAGACA
AAAGGATTGTGGATAGGCACATGGAAGACAAAAAAGAAGGACATAGGGGG
AATTACATGGCCGTTAACACCAATAAAATCACTGGGTGTGTACTTTGGTC
ATTGTAGTAAGAGTTTAATAAAATTAAACTGGGAAGACAAAGTGAAACAG
ATAAAGACAATACTTAACACCTGGCGACAAAGAAATCTTACACTTTTTGG
AAAAATTACCATTGTAAAATCATTAGCAGCGGCTAAAGTAACATATATCA
TGAATGTAATGCCAGCACCCTTGTCTATATTGAAAGAATTAAACACTGCT
TTTTTCAACTTTGTGTGGAGTGGAAAAGGAGATAAAATAAAAAGAAAAAC
ATTGGTTGGAAATTACGACCAAGGTGGGCTTCGAATGCTGGATATATACA
GTGTAAAGGATGCCCTACTTGCCTCATGGGCCAAACGAATATGTAATGGT
AGTGGCTCTTGGAGACATATACCTTCTCACTTTCTCTCAGCAGTAATGGG
AAGTGTGAATCTAGTTTTTGAAATGAATTGGATTGAAGAAAAGCACTTGA
GTGAGTTACCTATCTTTTACAAACAGATCATTGCTGCTTGGCAAAATGCA
AATGCTGTTTGTACAAAGCCACATACAACAGAGAACATTCAAAACCAGGT
TATCTGGGGGAATAGACATGTATTATCACAAGGTAAACCCTTGTTTTACC
CCCATTGGATTAAATCTGGTTTTATATATATAAAAGACATACTGCATAAT
GGTAAACTTCTAGCAGATAAGACCTGTTTTCAGAAGTTGAAAGTAAAGCG
AAACTGGGCTTGTGAGCTCCTGACTTTAAAACAAGCTATACCTAGACAGT
GGAAATGTGGGACTTGTAATGTATCCAGTAAGAAAAGTGAAGCATTGCCC
ACTTTGTATGTGCTTTCTGCGAAAAAGGTGAAAACTGTAGACACTATTAA
AACCTCTGATTTATATCAAAATGTTGTTCAACAAAAATTTATGTCACCAT
ATGTGGAAAAGAAATGGGAAATGTTTTTTGAGTGTAAGTTCAACTGGAAA
AACATATGGCAGAACCAGATAAATCCCACATTGGGAACACATATGTCACA
AACTAATTATAAAATACTACACGAAATACTACCTTGTGGAAAACTTTTGT
ATGTTTGGAAAAATATGTCGAGCAAATGTAATATATGTAACTGTGTTGAG
GATTACAAGCATCTTTTCTTAACGTGTAAATGTCTCACAACATTCTGGAA
AAACTTTTGTAATGTGATATATAAATGTTTTAAGTGTACTATAGAAGTAA
GCCTGATAGAAATTGTACTGGGATATAAAACAAACCACCCCTATAACACA
TCTGAAATATATGTAACAATCAATTTACTTATATGCATTGCAAAGAAAGT
CATATTTAGAAACTGGTGTAATAACAGAAACAGTGACAAGTACATACCAA
TAGACATATTCAGCATTTTTAAATCAGAAGTCAATTTACTTTTCAATCTG
GTAAACAACAGAAACAATAGAACATGCAAGCATGTGCTGTCCAATTTGTG
AACTGTG Coding sequence (CDS) from alignment at Sc0000044:208556..210512+ >transcript:BL76705_cuf0 ID=transcript:BL76705_cuf0|Name=transcript:BL76705_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1950bp|location=Sequence derived from alignment at Sc0000044:208556..210512+ (Branchiostoma lanceolatum)
TTCGATTGTGTGGAACATAACTTTATGTTTAAGGTCTTAGAGAAGTTCAA
TTTTGGCCCCAACTTTATACAATGGGTCAAAATTATCTACACTGACTGCC
TAGCTTCAGTTATTAACAACGGGTGGAAAACAGCTAGCTTTCAAATTCAG
AGAGGTATAAGACAAGGATGCCCCTTAAGTGCCTTGCTTTTTTTATTTGT
GGCAGAAATCTTATTTTATAGTATGCAAACCAATAGTAACATTAAGGGTA
TAAAAGTGAATGAAGAAGAGATAAAACTCTGCCAAGTAGCTGACGACACT
ACAGTATTCTTATCAACAGAGGAATCACTACATGAGGCACTTAGATGTCT
TAGGTCATTCTCAAGTGTTGCTGGACCCATTCTAAATAAAGCCAAGACAA
AAGGATTGTGGATAGGCACATGGAAGACAAAAAAGAAGGACATAGGGGGA
ATTACATGGCCGTTAACACCAATAAAATCACTGGGTGTGTACTTTGGTCA
TTGTAGTAAGAGTTTAATAAAATTAAACTGGGAAGACAAAGTGAAACAGA
TAAAGACAATACTTAACACCTGGCGACAAAGAAATCTTACACTTTTTGGA
AAAATTACCATTGTAAAATCATTAGCAGCGGCTAAAGTAACATATATCAT
GAATGTAATGCCAGCACCCTTGTCTATATTGAAAGAATTAAACACTGCTT
TTTTCAACTTTGTGTGGAGTGGAAAAGGAGATAAAATAAAAAGAAAAACA
TTGGTTGGAAATTACGACCAAGGTGGGCTTCGAATGCTGGATATATACAG
TGTAAAGGATGCCCTACTTGCCTCATGGGCCAAACGAATATGTAATGGTA
GTGGCTCTTGGAGACATATACCTTCTCACTTTCTCTCAGCAGTAATGGGA
AGTGTGAATCTAGTTTTTGAAATGAATTGGATTGAAGAAAAGCACTTGAG
TGAGTTACCTATCTTTTACAAACAGATCATTGCTGCTTGGCAAAATGCAA
ATGCTGTTTGTACAAAGCCACATACAACAGAGAACATTCAAAACCAGGTT
ATCTGGGGGAATAGACATGTATTATCACAAGGTAAACCCTTGTTTTACCC
CCATTGGATTAAATCTGGTTTTATATATATAAAAGACATACTGCATAATG
GTAAACTTCTAGCAGATAAGACCTGTTTTCAGAAGTTGAAAGTAAAGCGA
AACTGGGCTTGTGAGCTCCTGACTTTAAAACAAGCTATACCTAGACAGTG
GAAATGTGGGACTTGTAATGTATCCAGTAAGAAAAGTGAAGCATTGCCCA
CTTTGTATGTGCTTTCTGCGAAAAAGGTGAAAACTGTAGACACTATTAAA
ACCTCTGATTTATATCAAAATGTTGTTCAACAAAAATTTATGTCACCATA
TGTGGAAAAGAAATGGGAAATGTTTTTTGAGTGTAAGTTCAACTGGAAAA
ACATATGGCAGAACCAGATAAATCCCACATTGGGAACACATATGTCACAA
ACTAATTATAAAATACTACACGAAATACTACCTTGTGGAAAACTTTTGTA
TGTTTGGAAAAATATGTCGAGCAAATGTAATATATGTAACTGTGTTGAGG
ATTACAAGCATCTTTTCTTAACGTGTAAATGTCTCACAACATTCTGGAAA
AACTTTTGTAATGTGATATATAAATGTTTTAAGTGTACTATAGAAGTAAG
CCTGATAGAAATTGTACTGGGATATAAAACAAACCACCCCTATAACACAT
CTGAAATATATGTAACAATCAATTTACTTATATGCATTGCAAAGAAAGTC
ATATTTAGAAACTGGTGTAATAACAGAAACAGTGACAAGTACATACCAAT
AGACATATTCAGCATTTTTAAATCAGAAGTCAATTTACTTTTCAATCTGG
TAAACAACAGAAACAATAGAACATGCAAGCATGTGCTGTCCAATTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:208556..210512 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76705_cuf0 |
| Biotype | protein_coding |
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