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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76695_cuf3 >transcript:BL76695_cuf3-protein ID=transcript:BL76695_cuf3-protein|Name=transcript:BL76695_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
MSSDLYKNKATFVCNRFISHGCDTLLHSVKSLKSHLAKVHGITGNIVPCT
AKNCSEAFKTPNQCLQHLVEAHPHFIIEIGSDGVDDLYHYFRCVADLLEP
WPGYPSPLY Run BLAST on NCBI mRNA from alignment at Sc0001609:359..4475+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76695_cuf3 ID=transcript:BL76695_cuf3|Name=transcript:BL76695_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=4117bp|location=Sequence derived from alignment at Sc0001609:359..4475+ (Branchiostoma lanceolatum)
GGTAGCATACTAATCCGCTATGCTGGCATACACCATCCTCGAGAGTATAG
CGAGTCGGAGTGATGGTGACCTACTCTGGCGGGGTCACCGTCCTCAAAGT
GTATGCTGGGAGTGACTAAAGGTCGTCAGATTTTCCAATATGGCGGCTTA
GTGTACCGAACTCGACAGTCTAGTAAGTAAAGATTGTCGAAAGAGACCGA
GGATCGACTCTAGTGAGAGTTCTGGCTCTGTATCTGTCAAGGCTTCAGCC
CAGGGGAAGAAGCTCCGTAAGGAGTCGGAGCCCGACTCAAGTCCTCTTAT
TGACGAGTTCCCCTCTGGTTCTGTAAATACTCCTCCCTGTGGTGGGCAGC
CACAGGTGTAGTACGAGTCAAGTCCTCTTATTGACGAGTTCCCCTCTGGT
TCTGTAAATACTCCTCCCTGTGGGCAGCCACAGGTGTAGTACGAGTCAAG
TCCTCTTATTGAGGGGTTCCCCTCTGGTTCTGTGAATATTCCTCCCTGCG
GACAACCGGAGGGGGAGCACGAGATCTATTATCATGTCGTCTGATCTCTA
CAAGAATAAAGCCACCTTCGTCTGTAACCGTTTTATCTCTCATGGCTGTG
ACACGCTATTACATAGCGTCAAATCATTGAAGTCGCATCTCGCAAAAGTC
CACGGTATAACCGGGAACATTGTGCCTTGCACGGCTAAAAACTGCTCTGA
GGCCTTTAAGACCCCCAATCAGTGTTTGCAACATCTCGTCGAGGCCCATC
CTCATTTCATCATTGAGATTGGTTCCGATGGGGTGGACGATTTGTACCAT
TATTTTCGATGTGTTGCTGATTTATTGGAACCATGGCCTGGCTACCCTTC
TCCTTTGTATTGATTTTAATGTTACTTCAAGTCTGGCTTCGCTTAATGTC
TGTGGGTTGCGCGACCCACAGAAAAGGAGGCAACTGTTCAGTTTTTGTAA
ACAAAACAATTTTGATTTTATTTGATTATACTGCATCAGCACCCCATCCT
TGTACCATCAACGGTACAGACCGGACTGGCATAGCGAAAATCACCCAGTA
CATACCGATCCAGCCTATAGTCTGCGTAGGCTAGACTAGCAGAATAGAGC
CATCAGGCGGATGTACCGTCCTGATGTGATGCTGGCTGGGTAAGCAGGAA
GGTACAAAGGGGTCACTGCCCTCTCGTGTCACCCGCATAGGTCAACATTC
TAGGTGTCATGGCCGCCGTCTGAAAACATGGCAGTATCTGAACCAAGCGT
AACACAGCACCAAGAGACCACGTCTAGCGATATAATAGACGTTAAACAAG
GACAACAACAACAACAACAACGTATTCCGCCGTATTCTGCCAATTTCTAC
ACCAGAACAAGCATCAAGAAGTGTACTGCTTCGAAATATTTACAACTACA
ACTACATATCAACCTTTCACAAATTTGTGTTTTGTTTCTGAGATTCTGCT
AAGTGTCTTTCACCAACATCGATTGTGTCGATGACACATCCCAGATCCAC
TGACCACCGGCGCAGCCTTATCAACCAGTAGGTAGGTGCATATTTACCTT
CGTCATTCTTATGTTTCTGGTAGCGTATGTTTGTATGTATGTGGCAAAAG
CCAAATATACAAATGTAACTGCCTCCTTTGTCAGTACTGGACAACCAGTA
CGGAAGTGGTCGTCAGAACAGGAGCTCCAGTACTGAGACTTTCTCAGTAC
TGGACTTCCTGTACTGGGCAGCTTCAGTACTGGGAACCCTCCTGTCAGGA
CTGCTAACAGAGTGCTGAGACTCTAACGAGCGTCTAACGTTATTTTCAGG
GCTGCATCTCTTCAATGCTTTTTTTTCCTACTTCAAACTCTAATCAAAGC
TATTGTTTGGAAAACGTTCGAATGAAGAAAAAAATAAAATACAGTATGAG
TATCACATTCTGTTACGTTTCAACGACGACAACATATCCTTGTGGCTTGT
GCCTTTATCGGGAGAAAACGTACACTGAAATAATAATGTACTTTATATTA
CCTACCAAAATCTATGTCCATAACCAATTAAGCAAGGAACAAAACAGTAC
TACCTAAACGTTAGTATGTTCAGACAACTAAATCCAAAACTGTACATGTC
CAGTCGGTCCAAACAATGGCAAAAGTATAGAGGTTTTAGATAATGGACAC
CTAGTAACGAATCCGGAAACAAAAATATGGCGACTCGTCACTGGACATCC
AGCACGGAAGAAAGTTTGTGACTAGAAATCCAGGGACGAACGGCTTCATA
ATTCCACCCCCCCAATGCTCAGCCCAGGAATTCCATAAATGAACTCCGCT
CATCACTCCGTTGATGAACAGCATAACTTAAGAAGGTCTGGAAGGATTGT
ATTGATATTTGGTGTGTGGGTGATGAGCCCTGGAAATTGTATAAGGATGG
CCCACCATCCTGGATAATTCTTACTTGAAGACCCCCCTCCCGACTCCAAT
ATCAGGTTGCTGACAGGTCACATGACATCACTTTTTCTCATCCAGAACTT
ACCAACTCGAACTTACAGTCAATATCTTGTCTTAACCCACCCTGCCCTAC
TGTTCGGAGACTTCTTTTTCATTGTAAGGAACCAACAAAAGAAGCTTTGA
AACGATCAACCGTGTGTTACATCCAGGGCTTCTTGTTTTCCCTTCTTCAT
CTTTACATAATATATAATTAAATAGGTCTAAACAAGGAGGTTTAGATCTC
CTTGTTCTGAATTAGACAATTAATAGATTTTGGGCCCCCTAGCAGCTTGT
TATGGTGCTGCAGTACAGTGGAACTGTCAGGTTTTGATATAACGTTTTCT
GGACTTGCTGTGGTCTTAATGTTGAAACAAATCAAAGGAGCGAGTAACAA
CAAGTGATCCCAACCGAGATTCGAAGCCACGCCGAAACCGGCAGCCCAGA
TCACAGGCACGCACACCTTAACCACTAGGCTAAAAGGTTGTGACCTGAGT
TAGACTGGTCAGTTGGAGGCACTTGAACCCCACCGTTACAATGTCACTAT
GGCACAAGCTAGTAGTGCAACCCTGCTGCTAATTAGCCTGGGTGCCATCC
TATTTCTACCGGGGCTCCTACACTCGCTAACCTAAATGTTTTTAGGGTAG
CGAGTGTAGGAGCCCCGGTAGAAATAGGATGGCACCCAGGCTAGCTGCTA
ATGCCATCNAGCTTCTAATGCCATCTAGATCAAATTCCGTGAATCCTGGG
GCCTGAGTTTGAGGGTCAACTCCAGCTCTGACATGTTGTAATGGATTGCA
TTTGTCATTTTAGATGGTGATGCAAAGCCAGTGGCCCTGTGTATATGAGG
GAGCTTCAGGCATAAGTGTCTGCACGTAAAAGAGCCCAACGCACTTATTG
AGAAGAATGGGAGTGACCCGGTTTGCTTGTCNATTCTAAAGACTTGTTTT
TATTATGCTAAACCCATCAACACATACCGGTTTCTGTTTATTCATTCAGT
GTATAATTGCCCTTCAGTGTAAATTAACTTCAAACTTTACAAGCATGCAA
AGGCAGCTGGTTTTGTGCTATAGCCATGGGCAGTATAGATGAAATATTTT
CTCCTGTATTCATTTATCACACATACCAGTACACGACAACTCTAATATCT
TATTCCATTTTAAGTAAAAGTTGTGGGAAAGAGCGATTTTTCACATAGGA
AAGAGCACATTTTCAAACATTCAACAAAGTCACAATATTTTTCTTTATAA
TTATTATTCATTAATCTTTAATTATCGTGTCTCTTGTATGGAATGGGACC
TAGCTTCATGTAAATTAACTTTAATTGGCATGGTAGTACATATACCAACC
CCATATATTTTGACAATGATAAATTTACAACTTTACCAGTCTACTTTACA
AAGCAGAAATGTGATTTTGATGAGTGAGCAGTCACAGGGACATGTGTCAA
AGGCTGAAGTTGCCAAGACTTCTGTCTGTAGTATATTATTAGGTCCTTAT
AGTTGTCATAAGACGTTATACTAAACAGATACATTTTTGTGGCAACAATA
AGCACTAGGAAAAGGGCAATTGTCTTTATCAACCCATCCTTCACCTTTTT
TGTTGTCATTGTTATAGGTGCTGATGATATTCAACCCAGGCAGACCATCA
ATGCCCTATATCTACAC Coding sequence (CDS) from alignment at Sc0001609:359..4475+ >transcript:BL76695_cuf3 ID=transcript:BL76695_cuf3|Name=transcript:BL76695_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0001609:359..4475+ (Branchiostoma lanceolatum)
ATGTCGTCTGATCTCTACAAGAATAAAGCCACCTTCGTCTGTAACCGTTT
TATCTCTCATGGCTGTGACACGCTATTACATAGCGTCAAATCATTGAAGT
CGCATCTCGCAAAAGTCCACGGTATAACCGGGAACATTGTGCCTTGCACG
GCTAAAAACTGCTCTGAGGCCTTTAAGACCCCCAATCAGTGTTTGCAACA
TCTCGTCGAGGCCCATCCTCATTTCATCATTGAGATTGGTTCCGATGGGG
TGGACGATTTGTACCATTATTTTCGATGTGTTGCTGATTTATTGGAACCA
TGGCCTGGCTACCCTTCTCCTTTGTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001609 | genome | Sc0001609:359..4475 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76695_cuf3 |
| Biotype | protein_coding |
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