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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76636_cuf2 >transcript:BL76636_cuf2-protein ID=transcript:BL76636_cuf2-protein|Name=transcript:BL76636_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=192bp
MSSSSSLYHPGNGGIWLPCHFHSRSSNETHCIWCNMSSWCLHEKHMELFR
LYDCYYRETVEYLFLVIFTLECMFKILAYGLIAHNGAYLRNFWNILDFTI
VIIGIVSIVLETYKFEGFDVKALRAFRVLRPLRLVSGVPSKCEDVYYLFV
FIFVFYLWNCETAEWPIEFWQIQWGSYYKNSKIISITKKINL Run BLAST on NCBI mRNA from alignment at xfSc0001823:142..2597- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76636_cuf2 ID=transcript:BL76636_cuf2|Name=transcript:BL76636_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2456bp|location=Sequence derived from alignment at xfSc0001823:142..2597- (Branchiostoma lanceolatum)
TATAGGATGTAATAAGGATTGCTTTATCTGCATGCTGTTATTCCGGACGT
CTGACTCGCTGTTGTTTGACCTGATTTACTCCTGTTCCCTCTTCCTTTCA
GGTAAGGTCACTAACCTCTCTCACCACCTCGCCTCTCCAGTGTGAGAAAA
CCTCCCCTTTTCTCCACTTCAGTCTGGCCATTTCCCTGCTGCCCTCTCAT
GTTTCACCCCTCCCTCCGTCCGTCCGTACGCCACATGTGTGCTCGTTCGA
CCGATCGCTAAATGTCTTCTTCTTCCTCTCTCTACCATCCAGGAAACGGT
GGAATATGGCTTCCTTGTCATTTTCACAGCAGAAGCAGCAATGAAACTCA
TTGCATATGGTGTAATATGTCATCCTGGTGCTTACATGAGAAACACATGG
AACTTTTTAGATTGTATGATTGTTATTATAGGGTAAGTGTAGCTTACGGA
ATCACTCTCCCAGGTATACGGGTCCTCATATCTCTAAGTTCTCACCATAC
AACCACCCCTGCACTGTTCTTAACTTAATGTTTTGTTGCTCTTTTTTCCT
TTTCTTTTCCTGTAGGAGACAGTGGAGTATCTCTTCCTAGTCATATTCAC
GTTGGAGTGTATGTTCAAGATACTAGCCTATGGTTTAATTGCACACAACG
GTGCATATTTACGAAACTTCTGGAACATTTTAGATTTTACAATTGTCATA
ATAGGGTAAGTGATTTACTTTCTTTTCGTTTCGGTGTGAGTTTTATGTTG
TACATACGGTTGTGGTGCATGCCTTCGTTTGGAAGACGGAGAAAGCGTCT
CTCTGCGATATCATTTGTCCTCCTCCATCCCCATCAACTTCTCAACACCC
CCAGTTTTTTTGTTTGTTACATACCTCGACGTTGATTCCCCAACTCATTT
CCTTCACGCATGGTTCCGTTCTAGAACGAATCGTCATCAAAATCACCTCC
AAAATGGTATTCAAAGAGATGCTTTCCAGTTGTCCGCTCCTTTCTGTTAA
AGTTCTTCTTTTCCTTCTGTTTTGGTTGTGTTTGTGCACCTCTTGTGTGG
TTGAGCTTGTGATGTCCTTGTGGGTTGCTCCCTTGAGATGAACATGTAGC
ACTAAGCTCCTTGGTGGTGGCGTGCTGTGTCCGTGTTTTGTGGCTACTAA
AGTGCAAAGAAATGATTTCAGTACGTACAAAGTACGCAGTATGCTATAGA
CAAGACAAGTCCAGAAGTTTTGTAGGTCTGTTGCCCAGAAAGCAGGAACT
GTTTCATGTGCATGGCAGCAGTGATAGAGTCATGAGGAAATGTTGTTTGC
AATGTTTTGTTGAAGATTGAGTCAGTAGAATTTTTGCCATGTGCGTGTAG
TAGGCATCCTTCCATCTTGTCAGATGATGGTGGCACTCAAGTGCGTGTGA
GCTTTACAATAAACTGTAGTGCAGATTGGAGTAATCTTATACCTGTAAAG
CTGTATCTTTGCTTAATTCTAACTGATATGTCACAGGCAGAGGCAATGGC
ATCATTGTTTTAAATGTTGGCAAAAATCCTTCAGACTCAATTTTGAATGT
TGTGGGCAAGATATGTCTTTGATAGTACCTTTGCATGTCACCCTAGGTTG
TACTTGCTGTACACAGTTAGCTTTTTATAACTTTATACCTGGTCCAATTC
AAATCTAGAAAGATACTTTGAATAGGTCATTGACAGGAACAAAATATAAA
TTATAAATGCACCTATTGGTCTGTATGTCATTCAAAATTGTATGAAATTT
CGTGTGCTGTTCTTGTAATACTGAACCTATTTTTGGTAAAAGATTCGGGT
ACCTTCAAATTAAGAAATGTTCTAGTTGTGACAGTTACATGTATCATATA
ATCAGCCAGGCTAAAACGTTGGAAAGAAACAGTTTTTGTATGTCTTTACC
CTACAGTAGTTCGATTTGGGGAGGGGTAGCGTTATATTTTTTGCTTTTCC
TACTAAATGTTGTTCTCTTTTCCCACAGCATTGTCAGTATAGTGTTGGAA
ACTTATAAGTTCGAAGGCTTCGATGTCAAAGCTCTAAGAGCATTCCGAGT
TTTGAGGCCTCTAAGGCTTGTCTCTGGTGTCCCAAGTAAGTGTGAAGATG
TTTATTATTTATTTGTTTTTATATTTGTTTTTTATTTATGGAATTGTGAG
ACAGCTGAGTGGCCCATTGAGTTCTGGCAAATTCAATGGGGCTCATATTA
CAAAAACAGTAAAATCATCAGTATAACAAAGAAAATAAACTTGTGACAAA
ACTGTAATATAAGTAACAGAGGATTGTTGAGACACAAGTAACAGAAGTAA
CTAAAAGATACATTCAACAAAACATGTGTTACATGAAAACATATCAGAAA
GCCAAAGAAAACAAATTAAAAATCGTTATCAATACTTTGTAGTCTCTCAA
GATTGTTCATCTCCTAAAAATTGCATTTTGTTGTAACACTGGTATTTTAT
CCTTGC Coding sequence (CDS) from alignment at xfSc0001823:142..2597- >transcript:BL76636_cuf2 ID=transcript:BL76636_cuf2|Name=transcript:BL76636_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1737bp|location=Sequence derived from alignment at xfSc0001823:142..2597- (Branchiostoma lanceolatum)
ATGTCTTCTTCTTCCTCTCTCTACCATCCAGGAAACGGTGGAATATGGCT
TCCTTGTCATTTTCACAGCAGAAGCAGCAATGAAACTCATTGCATATGGT
GTAATATGTCATCCTGGTGCTTACATGAGAAACACATGGAACTTTTTAGA
TTGTATGATTGTTATTATAGGGAGACAGTGGAGTATCTCTTCCTAGTCAT
ATTCACGTTGGAGTGTATGTTCAAGATACTAGCCTATGGTTTAATTGCAC
ACAACGGTGCATATTTACGAAACTTCTGGAACATTTTAGATTTTACAATT
GTCATAATAGGCATTGTCAGTATAGTGTTGGAAACTTATAAGTTCGAAGG
CTTCGATGTCAAAGCTCTAAGAGCATTCCGAGTTTTGAGGCCTCTAAGGC
TTGTCTCTGGTGTCCCAAGTAAGTGTGAAGATGTTTATTATTTATTTGTT
TTTATATTTGTTTTTTATTTATGGAATTGTGAGACAGCTGAGTGGCCCAT
TGAGTTCTGGCAAATTCAATGGGGCTCATATTACAAAAACAGTAAAATCA
TCAGTATAACAAAGAAAATAAACTTGTGAATGTCTTCTTCTTCCTCTCTC
TACCATCCAGGAAACGGTGGAATATGGCTTCCTTGTCATTTTCACAGCAG
AAGCAGCAATGAAACTCATTGCATATGGTGTAATATGTCATCCTGGTGCT
TACATGAGAAACACATGGAACTTTTTAGATTGTATGATTGTTATTATAGG
GAGACAGTGGAGTATCTCTTCCTAGTCATATTCACGTTGGAGTGTATGTT
CAAGATACTAGCCTATGGTTTAATTGCACACAACGGTGCATATTTACGAA
ACTTCTGGAACATTTTAGATTTTACAATTGTCATAATAGGCATTGTCAGT
ATAGTGTTGGAAACTTATAAGTTCGAAGGCTTCGATGTCAAAGCTCTAAG
AGCATTCCGAGTTTTGAGGCCTCTAAGGCTTGTCTCTGGTGTCCCAAGTA
AGTGTGAAGATGTTTATTATTTATTTGTTTTTATATTTGTTTTTTATTTA
TGGAATTGTGAGACAGCTGAGTGGCCCATTGAGTTCTGGCAAATTCAATG
GGGCTCATATTACAAAAACAGTAAAATCATCAGTATAACAAAGAAAATAA
ACTTGTGAATGTCTTCTTCTTCCTCTCTCTACCATCCAGGAAACGGTGGA
ATATGGCTTCCTTGTCATTTTCACAGCAGAAGCAGCAATGAAACTCATTG
CATATGGTGTAATATGTCATCCTGGTGCTTACATGAGAAACACATGGAAC
TTTTTAGATTGTATGATTGTTATTATAGGGAGACAGTGGAGTATCTCTTC
CTAGTCATATTCACGTTGGAGTGTATGTTCAAGATACTAGCCTATGGTTT
AATTGCACACAACGGTGCATATTTACGAAACTTCTGGAACATTTTAGATT
TTACAATTGTCATAATAGGCATTGTCAGTATAGTGTTGGAAACTTATAAG
TTCGAAGGCTTCGATGTCAAAGCTCTAAGAGCATTCCGAGTTTTGAGGCC
TCTAAGGCTTGTCTCTGGTGTCCCAAGTAAGTGTGAAGATGTTTATTATT
TATTTGTTTTTATATTTGTTTTTTATTTATGGAATTGTGAGACAGCTGAG
TGGCCCATTGAGTTCTGGCAAATTCAATGGGGCTCATATTACAAAAACAG
TAAAATCATCAGTATAACAAAGAAAATAAACTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001823 | genome | xfSc0001823:142..2597 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76636_cuf2 |
| Biotype | protein_coding |
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