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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76632_cuf3 >transcript:BL76632_cuf3-protein ID=transcript:BL76632_cuf3-protein|Name=transcript:BL76632_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
MQEYDNEAESMVSTLAVNYDDDDLETALKLAQVDMFLRRLKERQRRKRIA
REYGLVGIFFNKQKQQAKRKLSKDEKELRDKMKVFSQFHASEQHEQFFEN
LQSGFHSIYVKVMYCRIWWAKI Run BLAST on NCBI mRNA from alignment at xfSc0001829:3..2593- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76632_cuf3 ID=transcript:BL76632_cuf3|Name=transcript:BL76632_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2591bp|location=Sequence derived from alignment at xfSc0001829:3..2593- (Branchiostoma lanceolatum)
ACATATCGACATTAAAGGAGCAAAGATACAATGTCGTTGTGTGGTGAGAA
CTGATAGAAAATCCAAGCCCTAATACTAGTAATAGACTGATCCTGACTGT
CCATCACAATTAGCGGATTGACCAATGAGAGAGTGACTGCATGTCCGTCA
AATATTTGCATTTTTATGTTTTAATTTTGCCTTTGACGTTTTGACGGAGG
TGGGTGGGGCTATGGTATCGGTCTATTTACACTAGGCGCGTTAAACTGAA
AGACCACCATGTAGCTTATTTTTGTGCCGCTTTTGAGCAGTTTTGATAAG
AAATTCGCGCACAAATGAGGTTAACAGTGGCATTAAATGTCAATTTCATA
AAGATTACAGCAACTAGAATACTTCCGATTTTCAAGCCTCATAAATTGCT
CTGGGTGCCTTTAACAAAGAATTGCCTTTTCTTTGGTCCAGTCTAAAACG
GTTTCAGAGCAAAAGAAGCTCAACAGAAGTCAGTCCCTATTATTGTCAGC
CAAGCATCAGTGCCCATTTTAGTCCGTCAAGAGCTGTTTTTAACGGAGGT
GTTCGATATAGAACAGGGGGGCGTGGCTTCGGGATTGGTCTATTAACGCC
ACTGTCTCAAACATTAAAAAACAGTCATAATGAGTGACTGAAAGTCTGGA
TGTAACACTGCATTTTAACATCTGGAACTCACTGTACTGTTGTAAATAAT
GGTGAAACTGCATTAATGTGATTCCATACTTGCTATAAATCAATGAGTAT
AAGTGGATTGATTGCATTATGTAAGGGTCATGCTGTTTTGACTCAATTCT
ATCATGCAGGAATATGATAATGAGGCAGAGAGTATGGTCAGTACACTAGC
AGTCAACTATGATGATGATGATTTAGAAACAGGTAAGGCACTCAAACATT
TGTAATTGATTGGATAATTGGGGTTCAAACCTCTAATAGTATGTTCAAAT
TGAGGTTTTGTCAAATATAAGCAAGACCCCTGAAATTTCTCTGAATATTT
TTTAGAAGCAGTGTAATTAACTGGGATCAAACTTACCACGAATATCTGTT
TGAACTGTTACTATACTGTAACAGGACTGTTCACCTCAAAGCCAATGAAA
GCTCTTGCATATATTTTATGTGAATAGTTGAACGCCAGTTCTTTGTCTGT
TAACCAATGCAAGACTATCAGGGATGCAATTAGAGGATCGTATATAAGGT
TGATTACCAGGCTAGACAGATTTAAAACTAGCATGGAATGTAAGGGACCA
TCCTGACCAAAAGCAAGAACTGTCATACTATAGAGCTAATTGTTGTTGCT
AATTTACTCTGTTTTGACCCAGATTATCATGGTTCACTTCATCTGTTTCC
AGCTTTGAAATTAGCCCAAGTGGACATGTTTTTACGAAGACTAAAGGAAA
GGCAAAGAAGAAAAAGGTGATTTGTCAAACTTTCTGCCACAACATAGTGT
GTATTCTGTGTTTTGTAAAGATATATCAGTTTACCATTGAATACAGATGG
TTAAATTGCATAGCAAGCCAACATGCCATCAGCTTCTCGAATAGTGTGTT
TAAAAAAGTCCGTTTTTGTTGTGTAACAACCCATGACCTCCTGTGGACAC
CACATGGTCATTGGTGTATCATGTAAGATATATCTAGCAACTTCTGTATT
ATTTGTCTTCAGAATAGCAAGAGAGTATGGGCTTGTCGGCATCTTCTTCA
ACAAACAAAAGCAGCAAGGTAAATTGATGCTTAAATTTTGAACTCAGTCC
GTAATATCATTTTTTGTGTAACTTTTATATGTCATACGCCAAATGACAGT
TACTCAAGCAACTGGATAAAATTTTGAAACAGTCAGACGTTTCAGACAGC
TTTATATGTCATGATTGTGATTTTATGAAACTCTAATAGCATTGTTGTTT
CTATTCCTCTTTCCAGCCAAGAGAAAATTGTCAAAAGACGAAAAGTAAGG
CAAAGTTGCTGTACAGTTTCTGCCCAGTTTGGAGTTCTTGTATTTGTGTG
TATCAGTATATGGCTTCGGAGAAGTATCAGTTTATGGCATTGCAAGATGT
ATGGATGATGTATTGAGTTATTCTTTCATCTTCTATTGTTTTAGCTCTGT
AACACTAACAGTGTAAGTGATAGAATTGTTTCAAAACATGCTCCCTACAT
GTATACTGGTATCGAAGACTACAGTATGCCAGGCCTTAATTTCTGTTTCT
TGTCTTTTTTCAGGGAACTGCGGGATAAAATGAAAGTATTTTCCCAATTC
CATGCCTCAGAGCAACACGAGCAGTTCTTCGAAAATCTTCAAAGTGGGTT
TCATTCAATCTACGTTAAAGTTATGTATTGTAGAATCTGGTGGGCAAAAA
TCTAGAAATATTCAGAATTTGAAAAATCTACATTCAGATTCAAATTTGTA
ACTTATTAGTAACTTATTTCCAACATATTCCCATCATTTTGTCACATTTC
CATCATCAATAAACGACGATAAACGCAAAATGCACAAAATCTGGCTTATT
TGCATATTATCTAGCGGCCCCGTTTTATAATATGCAAATAAGCCAGCGTA
GAACGCTAAGAAATAACCGAATCGACCGTTGCGGTCGGAGT Coding sequence (CDS) from alignment at xfSc0001829:3..2593- >transcript:BL76632_cuf3 ID=transcript:BL76632_cuf3|Name=transcript:BL76632_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1845bp|location=Sequence derived from alignment at xfSc0001829:3..2593- (Branchiostoma lanceolatum)
ATGCAGGAATATGATAATGAGGCAGAGAGTATGGTCAGTACACTAGCAGT
CAACTATGATGATGATGATTTAGAAACAGCTTTGAAATTAGCCCAAGTGG
ACATGTTTTTACGAAGACTAAAGGAAAGGCAAAGAAGAAAAAGAATAGCA
AGAGAGTATGGGCTTGTCGGCATCTTCTTCAACAAACAAAAGCAGCAAGC
CAAGAGAAAATTGTCAAAAGACGAAAAGGAACTGCGGGATAAAATGAAAG
TATTTTCCCAATTCCATGCCTCAGAGCAACACGAGCAGTTCTTCGAAAAT
CTTCAAAGTGGGTTTCATTCAATCTACGTTAAAGTTATGTATTGTAGAAT
CTGGTGGGCAAAAATCTAGATGCAGGAATATGATAATGAGGCAGAGAGTA
TGGTCAGTACACTAGCAGTCAACTATGATGATGATGATTTAGAAACAGCT
TTGAAATTAGCCCAAGTGGACATGTTTTTACGAAGACTAAAGGAAAGGCA
AAGAAGAAAAAGAATAGCAAGAGAGTATGGGCTTGTCGGCATCTTCTTCA
ACAAACAAAAGCAGCAAGCCAAGAGAAAATTGTCAAAAGACGAAAAGGAA
CTGCGGGATAAAATGAAAGTATTTTCCCAATTCCATGCCTCAGAGCAACA
CGAGCAGTTCTTCGAAAATCTTCAAAGTGGGTTTCATTCAATCTACGTTA
AAGTTATGTATTGTAGAATCTGGTGGGCAAAAATCTAGATGCAGGAATAT
GATAATGAGGCAGAGAGTATGGTCAGTACACTAGCAGTCAACTATGATGA
TGATGATTTAGAAACAGCTTTGAAATTAGCCCAAGTGGACATGTTTTTAC
GAAGACTAAAGGAAAGGCAAAGAAGAAAAAGAATAGCAAGAGAGTATGGG
CTTGTCGGCATCTTCTTCAACAAACAAAAGCAGCAAGCCAAGAGAAAATT
GTCAAAAGACGAAAAGGAACTGCGGGATAAAATGAAAGTATTTTCCCAAT
TCCATGCCTCAGAGCAACACGAGCAGTTCTTCGAAAATCTTCAAAGTGGG
TTTCATTCAATCTACGTTAAAGTTATGTATTGTAGAATCTGGTGGGCAAA
AATCTAGATGCAGGAATATGATAATGAGGCAGAGAGTATGGTCAGTACAC
TAGCAGTCAACTATGATGATGATGATTTAGAAACAGCTTTGAAATTAGCC
CAAGTGGACATGTTTTTACGAAGACTAAAGGAAAGGCAAAGAAGAAAAAG
AATAGCAAGAGAGTATGGGCTTGTCGGCATCTTCTTCAACAAACAAAAGC
AGCAAGCCAAGAGAAAATTGTCAAAAGACGAAAAGGAACTGCGGGATAAA
ATGAAAGTATTTTCCCAATTCCATGCCTCAGAGCAACACGAGCAGTTCTT
CGAAAATCTTCAAAGTGGGTTTCATTCAATCTACGTTAAAGTTATGTATT
GTAGAATCTGGTGGGCAAAAATCTAGATGCAGGAATATGATAATGAGGCA
GAGAGTATGGTCAGTACACTAGCAGTCAACTATGATGATGATGATTTAGA
AACAGCTTTGAAATTAGCCCAAGTGGACATGTTTTTACGAAGACTAAAGG
AAAGGCAAAGAAGAAAAAGAATAGCAAGAGAGTATGGGCTTGTCGGCATC
TTCTTCAACAAACAAAAGCAGCAAGCCAAGAGAAAATTGTCAAAAGACGA
AAAGGAACTGCGGGATAAAATGAAAGTATTTTCCCAATTCCATGCCTCAG
AGCAACACGAGCAGTTCTTCGAAAATCTTCAAAGTGGGTTTCATTCAATC
TACGTTAAAGTTATGTATTGTAGAATCTGGTGGGCAAAAATCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001829 | genome | xfSc0001829:3..2593 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76632_cuf3 |
| Biotype | protein_coding |
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