transcript:BL76564_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL76564_cuf0
Unique Nametranscript:BL76564_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL76564_cuf0

>transcript:BL76564_cuf0-protein ID=transcript:BL76564_cuf0-protein|Name=transcript:BL76564_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=100bp
KPRVRVAGDVLDREEYDYLKSSVHLYMSDEVSDEDDKSSVWVQPPAWRAD
KLTDITRRFQAVLDQNRRDRRLPFSNKERKQGEEFTDRCPPSSGLHSHTS
Run BLAST on NCBI

mRNA from alignment at Sc0001086:9731..10716-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL76564_cuf0 ID=transcript:BL76564_cuf0|Name=transcript:BL76564_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=986bp|location=Sequence derived from alignment at Sc0001086:9731..10716- (Branchiostoma lanceolatum)
AAGCCCCGAGTTCGGGTGGCAGGGGACGTCTTGGACAGAGAAGAATATGA CTACCTGAAGTCATCCGTACATCTTTACATGTCCGATGAAGTCAGCGATG AGGATGACAAGTCATCGGTGTGGGTCCAGCCACCCGCCTGGCGGGCGGAC AAGTTAACGGACATAACGCGAAGGTTCCAGGCGGTCCTAGACCAGAATAG GAGAGACAGGCGCCTGCCCTTCTCCAACAAAGAGAGAAAGCAAGGGGAGG AGTTTACAGACAGATGTCCACCATCCAGCGGGCTGCACAGCCACACCTCA TGACTGTGGCCTCCCAGCAGGAGGAAGGCGCGGAGGGAGAGGAACGCGTA GAGGGAGAAGAACGCACAGAGGGAGAGGAAGACACGGAGGAAGAGGAAGA CAGCGACTGAAGCTAGGAGTTGTGATGATGAATGATGACTGGTTTATACA ACTTTTAAAACACACCACATGATAGCCCTAAGGCTGAATTGGTAGGCTTG TTGACAACAATAAAAGAAGCACATACTTCATCATCAAAACGTCACATTCC ACTATTTACTATCGCTGCTTAGCAAGTTGACCATGTAGTACGTAGATATG ACTTTTTGTATATCTCATAGTGTTGGCTTTAAAAGTTTGTTGTAGTCAGT TTTTACTATCGCAGTTTAGCAAGTTGACCCGTAGTACGTAGATAAGACTT TTTGTATATCTCACAGTGTTGGCATTAAATGTTTGTTGTAGTCGGTTACT CGAGCGAGTCTTTCTGCCGGAGATCATCTCACGGCACAGTGGGAACCAGT CCCTGAAGGTCTGGGATCTCAGTAGAGAGTGTGCAAAGTTTCTGCATAGT TCCTCACGTCTTTGTGATAGTGGTGTTAGTGAGAGTTCTCCAATACAACT TGCATTTGATGATACTTCTGTTTTGCACTCGTGTATTGATTTGCCTATGT CTTTGGTGTGGTACTTCTGTTATACTTAGTTCGTGC

Coding sequence (CDS) from alignment at Sc0001086:9731..10716-

>transcript:BL76564_cuf0 ID=transcript:BL76564_cuf0|Name=transcript:BL76564_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=303bp|location=Sequence derived from alignment at Sc0001086:9731..10716- (Branchiostoma lanceolatum)
AAGCCCCGAGTTCGGGTGGCAGGGGACGTCTTGGACAGAGAAGAATATGA
CTACCTGAAGTCATCCGTACATCTTTACATGTCCGATGAAGTCAGCGATG
AGGATGACAAGTCATCGGTGTGGGTCCAGCCACCCGCCTGGCGGGCGGAC
AAGTTAACGGACATAACGCGAAGGTTCCAGGCGGTCCTAGACCAGAATAG
GAGAGACAGGCGCCTGCCCTTCTCCAACAAAGAGAGAAAGCAAGGGGAGG
AGTTTACAGACAGATGTCCACCATCCAGCGGGCTGCACAGCCACACCTCA
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL76564gene:BL76564Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL76564_cuf0-E1BL76564_cuf0-E1-1564476830-505314Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL76564_cuf0transcript:BL76564_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001086genomeSc0001086:9731..10716 -
Properties
Property NameValue
Transcript idBL76564_cuf0
Biotypeprotein_coding