|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76536_cuf0 >transcript:BL76536_cuf0-protein ID=transcript:BL76536_cuf0-protein|Name=transcript:BL76536_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=150bp
TAYYLHKTCPSPEKMSTTGDKVTIAPLKPEHSQLVSKTWKFGGTPEAEEY
LHFQISTFPSACVYDQDDKPLSWILMNYYGPLGVGFTLPDHRGKGYFQLA
SRQLISVCLKKGHLPFLFIEDYNAASRIIHKKLGYTWQEAGRCAYICLNH Run BLAST on NCBI mRNA from alignment at Sc0000415:161256..162937+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76536_cuf0 ID=transcript:BL76536_cuf0|Name=transcript:BL76536_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1682bp|location=Sequence derived from alignment at Sc0000415:161256..162937+ (Branchiostoma lanceolatum)
CACAGCCTACTACCTGCACAAAACATGTCCCAGTCCGGAGAAAATGAGCA
CGTGAGTGGTTATGTACATAATTATACTTAGCTATTATATATGATACAAG
GACTATAAGCAGGAAATTCTATTTGAGTTTATGATGAATAACTAATGTTC
CACGACCTCATAACTTCGCCGAGTGATATCAACATTCATGACAGACGTGT
TATCAAAAATTCTTATTAATTGTAAAGGGTCCTAATTTCCATATGCAAAT
GTAGTACTGTATCATAATATCAGATGATGCATGAAAGTCTAATCTAAAGT
TAGCAAAGAGGGCTATTAAAGCATTTTCTCGATTATGCAAGTGTGGCCCT
GATATGCATAATTTATTGTTGATGATGTTCACCTTGTCCGTGGCGGACTC
GGTCGTTCATTCGGTGGTTATAGGGACCGGAAATTCCCTATGAGACCATA
TAGAGCTCAGGGTTTGACGTTCCCCCTATATGAAGATCCATCAACAGCTT
CTCGGGTTGACCTACATATACACCCACACCACAGCCTAGCCACCCCACCA
TGGCTCAAACAAAAACATAACGAAGGTTGACTTAAACTGCTCTCAATCAC
GCGCAAAAATGTACACATGGGATACTCAACTCATTCGCTCAGTCCTTGTC
AACTTCCTGGCGTAATCGCTATAAACAATTCTGCATGATGTAATACTAGG
ACTGCTAACTTTGGATTTTGATTTAAAACAAAGTTTCCAAAGGCAAACAG
GCCAAGCATCACATGTGAAGTAAATTCAAACTGGGCCCGCTCAGAACTAA
AAAAAAATAGCTCGGCAGCCGCCGTGGATCCGATGGGGGTTCGTTCGAAA
GTTTTGAAAAATATAGCCCATAAAGTAATCGTTTTGCATGGTTAAGAACA
TTTTCACAATGTATTCTACCCACTTTGTAGGACTGGCGACAAGGTGACCA
TAGCTCCTCTCAAACCTGAGCACAGCCAGCTTGTCAGTAAGACCTGGAAA
TTTGGAGGCACTCCCGAAGCTGAGGAGTACTTGCACTTCCAGATCAGCAC
TTTTCCCTCGGCCTGTGTGTATGATCAAGATGACAAACCCTTGTCATGGA
TCCTGATGAATTATTACGGTCCACTGGGGGTTGGCTTCACCTTACCGGAT
CACAGAGGAAAGGGTTATTTTCAACTCGCTTCAAGACAACTGATCAGTGT
CTGTCTAAAGAAAGGGCACTTGCCTTTCCTTTTCATTGAGGACTACAACG
CGGCCTCGAGGATCATACACAAGAAACTTGGATACACTTGGCAGGAGGCA
GGGAGGTGTGCGTACATTTGTCTCAATCATTGACATTTAAGTCTGTGTCC
GGGAGGTTTTGCTGCAAATTAGGACCAAAAAAATTGAAATAGTGACCATT
GCATTAAATCATTTCTGTTAAAAAAGGTCCATAGCGGACCAAAATCTACA
TGCCTTTGACAACAATGTCATTGAAAGTCATGTTTCGTTTTATGGCCAAC
AGAAATTGTTAAAATACGGCAGATCATTAACATATTTACAAGTTGGCTAT
AAGGTACCATTATTTTGAAGTAAGTATCATGGTCCATGATTTCTGTTGAT
ATTCAATATATCATCTGAGTGACGACATTCAAAACAGAATTCCTGTATTT
CACACTCTGTTAACAGTTAATGTAAAATGTCC Coding sequence (CDS) from alignment at Sc0000415:161256..162937+ >transcript:BL76536_cuf0 ID=transcript:BL76536_cuf0|Name=transcript:BL76536_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=906bp|location=Sequence derived from alignment at Sc0000415:161256..162937+ (Branchiostoma lanceolatum)
ACAGCCTACTACCTGCACAAAACATGTCCCAGTCCGGAGAAAATGAGCAC
GACTGGCGACAAGGTGACCATAGCTCCTCTCAAACCTGAGCACAGCCAGC
TTGTCAGTAAGACCTGGAAATTTGGAGGCACTCCCGAAGCTGAGGAGTAC
TTGCACTTCCAGATCAGCACTTTTCCCTCGGCCTGTGTGTATGATCAAGA
TGACAAACCCTTGTCATGGATCCTGATGAATTATTACGGTCCACTGGGGG
TTGGCTTCACCTTACCGGATCACAGAGGAAAGGGTTATTTTCAACTCGCT
TCAAGACAACTGATCAGTGTCTGTCTAAAGAAAGGGCACTTGCCTTTCCT
TTTCATTGAGGACTACAACGCGGCCTCGAGGATCATACACAAGAAACTTG
GATACACTTGGCAGGAGGCAGGGAGGTGTGCGTACATTTGTCTCAATCAT
TGAACAGCCTACTACCTGCACAAAACATGTCCCAGTCCGGAGAAAATGAG
CACGACTGGCGACAAGGTGACCATAGCTCCTCTCAAACCTGAGCACAGCC
AGCTTGTCAGTAAGACCTGGAAATTTGGAGGCACTCCCGAAGCTGAGGAG
TACTTGCACTTCCAGATCAGCACTTTTCCCTCGGCCTGTGTGTATGATCA
AGATGACAAACCCTTGTCATGGATCCTGATGAATTATTACGGTCCACTGG
GGGTTGGCTTCACCTTACCGGATCACAGAGGAAAGGGTTATTTTCAACTC
GCTTCAAGACAACTGATCAGTGTCTGTCTAAAGAAAGGGCACTTGCCTTT
CCTTTTCATTGAGGACTACAACGCGGCCTCGAGGATCATACACAAGAAAC
TTGGATACACTTGGCAGGAGGCAGGGAGGTGTGCGTACATTTGTCTCAAT
CATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000415 | genome | Sc0000415:161256..162937 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76536_cuf0 |
| Biotype | protein_coding |
|
