transcript:BL76471_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL76471_cuf0
Unique Nametranscript:BL76471_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL76471_cuf0

>transcript:BL76471_cuf0-protein ID=transcript:BL76471_cuf0-protein|Name=transcript:BL76471_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=258bp
SDLEPKSVECIWLELFAGCYRVIFSVYYRPPGQDASTANEFIDLFTDSVF
AAGSSNYDAVIITGDFNAKHNAWWAPDPITSVGSKLFQASTMLNLTQVIS
EPTCDLSRSPSLIDLLFTDMKNLVKSTTVLSPLSGCHHCPIITTFNMSLK
SPRPYIRTIWEYPKIDHDLLAEFSSDSKWHEIFYCNAVDDACYKLVDLIF
EAKTKCVPHKDILIRPRDKPWMSPRIRSLMRRRDKLHRNAKVSNSTTLWS
AYRNVRNK
Run BLAST on NCBI

mRNA from alignment at Sc0000040:7713..8488+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL76471_cuf0 ID=transcript:BL76471_cuf0|Name=transcript:BL76471_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=776bp|location=Sequence derived from alignment at Sc0000040:7713..8488+ (Branchiostoma lanceolatum)
CTCAGATCTGGAGCCCAAATCTGTTGAATGTATCTGGCTGGAACTATTTG
CAGGATGCTATCGTGTCATATTTTCTGTTTACTACCGCCCACCTGGCCAG
GACGCCAGTACTGCTAATGAATTTATTGACTTATTTACTGACTCAGTCTT
TGCAGCTGGGTCCTCTAATTATGACGCCGTCATAATTACAGGTGACTTCA
ATGCCAAGCACAATGCATGGTGGGCTCCTGACCCAATTACCTCTGTCGGC
TCAAAACTATTTCAAGCATCGACTATGTTAAACCTTACCCAGGTGATTAG
CGAGCCGACATGTGATTTGTCACGTTCTCCTTCTTTGATTGACTTACTGT
TTACTGATATGAAGAATCTTGTTAAATCTACCACAGTTTTGTCTCCCCTT
TCTGGATGCCACCACTGTCCCATAATTACTACTTTTAATATGTCCTTAAA
GTCCCCGCGCCCTTATATCCGCACTATCTGGGAATATCCTAAAATCGATC
ATGACTTATTAGCTGAATTTTCGTCTGATTCCAAATGGCATGAAATTTTT
TACTGTAACGCTGTTGATGATGCATGTTATAAGCTGGTAGATCTTATATT
TGAAGCCAAAACCAAATGTGTTCCCCATAAGGACATTCTTATAAGACCCA
GAGATAAACCATGGATGTCTCCCAGGATTAGATCGTTGATGCGTCGGCGA
GACAAGCTACATAGGAATGCTAAAGTTTCGAACAGTACCACACTGTGGTC
TGCATACCGTAATGTCAGAAATAAAC

Coding sequence (CDS) from alignment at Sc0000040:7713..8488+

>transcript:BL76471_cuf0 ID=transcript:BL76471_cuf0|Name=transcript:BL76471_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=774bp|location=Sequence derived from alignment at Sc0000040:7713..8488+ (Branchiostoma lanceolatum)
TCAGATCTGGAGCCCAAATCTGTTGAATGTATCTGGCTGGAACTATTTGC
AGGATGCTATCGTGTCATATTTTCTGTTTACTACCGCCCACCTGGCCAGG
ACGCCAGTACTGCTAATGAATTTATTGACTTATTTACTGACTCAGTCTTT
GCAGCTGGGTCCTCTAATTATGACGCCGTCATAATTACAGGTGACTTCAA
TGCCAAGCACAATGCATGGTGGGCTCCTGACCCAATTACCTCTGTCGGCT
CAAAACTATTTCAAGCATCGACTATGTTAAACCTTACCCAGGTGATTAGC
GAGCCGACATGTGATTTGTCACGTTCTCCTTCTTTGATTGACTTACTGTT
TACTGATATGAAGAATCTTGTTAAATCTACCACAGTTTTGTCTCCCCTTT
CTGGATGCCACCACTGTCCCATAATTACTACTTTTAATATGTCCTTAAAG
TCCCCGCGCCCTTATATCCGCACTATCTGGGAATATCCTAAAATCGATCA
TGACTTATTAGCTGAATTTTCGTCTGATTCCAAATGGCATGAAATTTTTT
ACTGTAACGCTGTTGATGATGCATGTTATAAGCTGGTAGATCTTATATTT
GAAGCCAAAACCAAATGTGTTCCCCATAAGGACATTCTTATAAGACCCAG
AGATAAACCATGGATGTCTCCCAGGATTAGATCGTTGATGCGTCGGCGAG
ACAAGCTACATAGGAATGCTAAAGTTTCGAACAGTACCACACTGTGGTCT
GCATACCGTAATGTCAGAAATAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL76471gene:BL76471Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL76471_cuf0-E1BL76471_cuf0-E1-1564476830-202377Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL76471_cuf0transcript:BL76471_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000040genomeSc0000040:7713..8488 +
Properties
Property NameValue
Transcript idBL76471_cuf0
Biotypeprotein_coding