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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76437_cuf0 >transcript:BL76437_cuf0-protein ID=transcript:BL76437_cuf0-protein|Name=transcript:BL76437_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=207bp
VGNGNDPPNSRDTMAGSVVVVFGATGLQGGGVANALLQDSDFKVRAVTRN
ASSAKAKALQERGAELVEGSYDDPGSLERALQGAHGMFVVTNYMEHQEFD
RDVKQGKAVADAAKASGVQHVVFSSLENVQKTMGFPCLFYDSKAEIEEYM
KSIGLPVTIVKYPAYYENYINFGPRKLDDGTYELGYALEGAAMHAVSVAD
MGFAVRT Run BLAST on NCBI mRNA from alignment at Sc0000135:29068..32895- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76437_cuf0 ID=transcript:BL76437_cuf0|Name=transcript:BL76437_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3828bp|location=Sequence derived from alignment at Sc0000135:29068..32895- (Branchiostoma lanceolatum)
CGTGGGGAACGGGAACGATCCTCCCAATAGCAGAGACACTATGGCTGGAT
CAGTTGTAGTTGTTTTCGGAGCAACAGGTGAGTTCTGACTAACGGTTCTA
CAAACGAGCTCGAGACAGAAAAGCACTTCAAACTAGGCCACACGTTGTAT
CAAAACTGAGCCGCCTGATTTTTCTTAGTAATTACCTTTGCCATGAAGAT
GTGTTAGTATGTGTGTGTATGTGTGCGCATGTGTGTGTGTGCGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACGGTATGTGTGTGTGT
GTCTGTCTGTCACGCCAGTGTCTGTGACAGTGTGTGTGTGTGTCTGTAAT
GATGATACGGAGTCGAGTATGAACATAAAATATCAACAAACCAGCCAATG
TTTTGTTTAATCATCTACATTTTCCTACCTTTACAGGGTTACAGGGAGGC
GGGGTGGCCAATGCCCTTCTGCAGGACTCGGATTTCAAAGTTCGGGCAGT
GACAAGAAACGCCTCTAGCGCCAAGGCTAAGGCACTGCAGGAGAGAGGTG
CTGAGCTCGTTGAGGGCAGTTATGATGATCCCGGCTCACTGGAGCGGGCA
CTGCAGGTATTCAAGACTGCCTGGGCAAACGTTTCCGTCGCATGACGTCA
TTCCAGATCCTTACAAAACATGAATGTTGAAAAGAATTGTACTGAATTCT
TAACCCATTGACTATTACAACTGTTCCTGTTCCAAAAGCTTAGTGTTTGT
TTGTTTGTTTGTTTGTTTATTTATTTATCTAACCAGGGGATATCATACCG
GAAACTGGCGATTTTCAATTAGCCCTGGGGGGGGGGGCACAAACAAAAGT
TATTNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGCACAAACAAAAGTTATTTACATCAAACGTAATCAAAGTAACAAG
AGACAACACAAAAACGTTACGCAAACTACAAATTGATACAAAACCAAACT
AACTTGAATAACATAAAATTCATTACTTTTTCCCGCCCAGGGAGCACACG
GAATGTTTGTGGTAACGAACTACATGGAACATCAGGAGTTCGATCGAGAT
GTCAAACAGGTAGGCATTTTTGCAGTAAGTCGAAAGTACAAGTAGCAAAA
TGCTCAAAAGATGTATGTTTTGTTTTGTATTCTTTCAAATTCAAAAGCGT
CTAAAAGCATTTTCGTAAAATGGTTTATGCTTGTTGGCTTGCATCTAAGG
GTAAGGCTGTGGCGGATGCAGCAAAAGCTTCCGGTGTTCAACACGTGGTG
TTCAGTAGCCTTGAAAACGTGCAGAAGACCATGGGGTTCCCCTGTCTGTT
CTACGACTCTAAAGCTGAAATCGAGGAGTACATGAAGTCTATTGGCCTTC
CGGTCACCATCGTGAAGTATCCTGCCTACTACGAGAACTACATCAACTTT
GGTCCACGGAAACTGGACGATGGAACTTATGAGCTAGGTACTACAAAGTA
GCCTTTTGGGTGAAGATAGATCTATCTTTGACGTATTCGAACTTTTATAA
TTGAATTTATGGTTAAATAGAGATGCATGAAATAGTCATTTCCGTCCAGG
TTTCCACCCAAAGCTATTTGAAGCACGGCTTTATCTCTATGTAAGAATCC
GTTGTGATTATCTTCGCCGAGTACTTGTACTCGGAGAAGATTATGTTCTC
GGTTGAAAAAATCTGTTGGGTGGGTCTGAATGTATGTCAGGAGCATAACT
CAAGAAAGCTTCAATGATTTTTGGTAGGTGTGTAGTGGTTGTGCAAAGGA
AGGTCAAGTTCGAAAATGATTCACCTTGCGTTTTTCAACAGTACTGCAGC
AGACTTTGCATTTTTTTGTGTTTGTATGTAGGCAAAAAAGTGACGAAAAC
GTTGATGGATCTTCATGATTTTTTGCAGGTGTGTAGATGTTGTGGAAATG
GGGGTCAAGTTCAAAAATGGTTCCCCTGGTATTTTCCGTCGGTACTGCAG
CGGGCTTTGTGTGGATGTGTATTTGTATGTCGCCAACATAACTCGAGAAG
CTGTTGATGGATCCGTATGATATTTAGTGGATGGGTAGGGTTTACAGAAA
GGAAGGTCAAGTTCGATAATGGGCCTTCTAGCAAGTACCTAAGGTACTGC
AGCGGAGCTTCAAAATTTAGGGGCATATTTTCTGAAAGTGCTATGGTCAT
GATTTTTGTGTGGTAGATAGTTCATGCCACAGAAAGTAAGTTCTGTAAAT
TTTGGCCCCCTAGCGGCTTGTTAAGAACTGCAGTGGGTGTTTTTGTTTCT
ACATTCGGACATGAATAACTTGAGAAGGGGTCGACAGATCGTCGTGATGT
TTTGGTATGTAGAGAGCTCAGATGGTCATTTACATTATCAATGACTAATT
ATGCAAATCAGGAGCTAATTTGCATAATTAGTAAGGAAATTTTGTTAACC
CACTGCACTTCAATGGGACATGGGACAGTGTTAGGTCATGTAAACAAATG
GCCTTGCATAAACGTTCATGTAGGTCAAATAAATAAACTATTCTCCAAGC
AGAAGTGTGGGTCCTGCTGTTTTTTTCAACACGGCTGGCGACATAACGAA
ATGGGGACAAAATAGATAGCCTGACTAAAAACACCTAAAAACGCGACAGA
TTTATTCTATTCATATGTATTGACTGTACTATTTCATCATCACTTTCAAC
TTTCAACACTGCAATATCGAACCTTTGTGGCCCATATAATATCAACATAC
TCATATTTTTCATGACCAGTTATAACATATATCAGCACACTCTACACATA
TACTAGTCCTGTACCACCAAATGATTTTAAACCCTATCTAGACTGGACTC
ATTCGCCCAATCATAACTTCCAAATGGTATGGTGCATGATCAAATTTGCA
GGGGGTGATAAGCACGTAAATATTAATCACTCTCCATGGTAAGCCTTGAT
TATTTGGCGAAGATAATGTGTTCGTGGAACTCTAGTTTGTTATAAGAATA
GTCACGGTAAAGTCGATTTCGTAATTTTGTCCGGAAAGCGATGTACTTGC
TAACTACTTTTTCTCAAGAACTGCGTCTATGTATCAAACAAGCTTTCCTT
ATACGTCCTTTCCGGTTAAGTGCCAATAAGCATCTTCGAAAAATTTGAAA
AATGTTGAAAATATCAAAAATGTTGAAAATATTGAAAAGTGTTGAAAATA
TTGAAAAATTCTGAAAAATAAAGGATTCATAGTTTCAATTTGTGCAAGGA
CGTTACTAGTATATTGAATAAATCGTCCTTGGTTGATGCAATTCTCCAGG
ATATGCGTTGGAGGGCGCTGCAATGCACGCCGTCAGTGTTGCCGACATGG
GTTTCGCCGTCAGAACGATCTTCAAGAACAGGGCAGAATGGCTGGGTCGG
GCTGTCGGCTTCAGTGGAGACAAACTCACCATCCAGCAACACGCAGACAT
TCTCTCCAAGCACCTGGCGCCGAAGGTGTTCAAGCCGACCAAGGTAAGAG
GGACAAACGTTAACGTACTAAGGACTAAAAGGGTGATGACATTGAGGACC
TATATAGCCTGTATATAGCCTGGGTTTAAGCTGGGCACCACAGTAGGTCT
GGTGGTGTAGCATCCATCCATCCATCCATCCATCCATCCTTCCANAAGTG
TTGAAAATATTGAAAAATTCTGAAAAATAAAGGATGCATAGTTTCAATTT
GTGCAAGGACGTTACTAGTATATTGAATAAATCGTCCTTGGTTGATGCAA
TTCTCCAGGATATGCGTTGGAGGGCGCTGCAATGCACGCCGTCAGTGTTG
CCGACATGGGTTTCGCTGTCAGAACGAT Coding sequence (CDS) from alignment at Sc0000135:29068..32895- >transcript:BL76437_cuf0 ID=transcript:BL76437_cuf0|Name=transcript:BL76437_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3105bp|location=Sequence derived from alignment at Sc0000135:29068..32895- (Branchiostoma lanceolatum)
GTGGGGAACGGGAACGATCCTCCCAATAGCAGAGACACTATGGCTGGATC
AGTTGTAGTTGTTTTCGGAGCAACAGGGTTACAGGGAGGCGGGGTGGCCA
ATGCCCTTCTGCAGGACTCGGATTTCAAAGTTCGGGCAGTGACAAGAAAC
GCCTCTAGCGCCAAGGCTAAGGCACTGCAGGAGAGAGGTGCTGAGCTCGT
TGAGGGCAGTTATGATGATCCCGGCTCACTGGAGCGGGCACTGCAGGGAG
CACACGGAATGTTTGTGGTAACGAACTACATGGAACATCAGGAGTTCGAT
CGAGATGTCAAACAGGGTAAGGCTGTGGCGGATGCAGCAAAAGCTTCCGG
TGTTCAACACGTGGTGTTCAGTAGCCTTGAAAACGTGCAGAAGACCATGG
GGTTCCCCTGTCTGTTCTACGACTCTAAAGCTGAAATCGAGGAGTACATG
AAGTCTATTGGCCTTCCGGTCACCATCGTGAAGTATCCTGCCTACTACGA
GAACTACATCAACTTTGGTCCACGGAAACTGGACGATGGAACTTATGAGC
TAGGATATGCGTTGGAGGGCGCTGCAATGCACGCCGTCAGTGTTGCCGAC
ATGGGTTTCGCTGTCAGAACGGTGGGGAACGGGAACGATCCTCCCAATAG
CAGAGACACTATGGCTGGATCAGTTGTAGTTGTTTTCGGAGCAACAGGGT
TACAGGGAGGCGGGGTGGCCAATGCCCTTCTGCAGGACTCGGATTTCAAA
GTTCGGGCAGTGACAAGAAACGCCTCTAGCGCCAAGGCTAAGGCACTGCA
GGAGAGAGGTGCTGAGCTCGTTGAGGGCAGTTATGATGATCCCGGCTCAC
TGGAGCGGGCACTGCAGGGAGCACACGGAATGTTTGTGGTAACGAACTAC
ATGGAACATCAGGAGTTCGATCGAGATGTCAAACAGGGTAAGGCTGTGGC
GGATGCAGCAAAAGCTTCCGGTGTTCAACACGTGGTGTTCAGTAGCCTTG
AAAACGTGCAGAAGACCATGGGGTTCCCCTGTCTGTTCTACGACTCTAAA
GCTGAAATCGAGGAGTACATGAAGTCTATTGGCCTTCCGGTCACCATCGT
GAAGTATCCTGCCTACTACGAGAACTACATCAACTTTGGTCCACGGAAAC
TGGACGATGGAACTTATGAGCTAGGATATGCGTTGGAGGGCGCTGCAATG
CACGCCGTCAGTGTTGCCGACATGGGTTTCGCTGTCAGAACGGTGGGGAA
CGGGAACGATCCTCCCAATAGCAGAGACACTATGGCTGGATCAGTTGTAG
TTGTTTTCGGAGCAACAGGGTTACAGGGAGGCGGGGTGGCCAATGCCCTT
CTGCAGGACTCGGATTTCAAAGTTCGGGCAGTGACAAGAAACGCCTCTAG
CGCCAAGGCTAAGGCACTGCAGGAGAGAGGTGCTGAGCTCGTTGAGGGCA
GTTATGATGATCCCGGCTCACTGGAGCGGGCACTGCAGGGAGCACACGGA
ATGTTTGTGGTAACGAACTACATGGAACATCAGGAGTTCGATCGAGATGT
CAAACAGGGTAAGGCTGTGGCGGATGCAGCAAAAGCTTCCGGTGTTCAAC
ACGTGGTGTTCAGTAGCCTTGAAAACGTGCAGAAGACCATGGGGTTCCCC
TGTCTGTTCTACGACTCTAAAGCTGAAATCGAGGAGTACATGAAGTCTAT
TGGCCTTCCGGTCACCATCGTGAAGTATCCTGCCTACTACGAGAACTACA
TCAACTTTGGTCCACGGAAACTGGACGATGGAACTTATGAGCTAGGATAT
GCGTTGGAGGGCGCTGCAATGCACGCCGTCAGTGTTGCCGACATGGGTTT
CGCTGTCAGAACGGTGGGGAACGGGAACGATCCTCCCAATAGCAGAGACA
CTATGGCTGGATCAGTTGTAGTTGTTTTCGGAGCAACAGGGTTACAGGGA
GGCGGGGTGGCCAATGCCCTTCTGCAGGACTCGGATTTCAAAGTTCGGGC
AGTGACAAGAAACGCCTCTAGCGCCAAGGCTAAGGCACTGCAGGAGAGAG
GTGCTGAGCTCGTTGAGGGCAGTTATGATGATCCCGGCTCACTGGAGCGG
GCACTGCAGGGAGCACACGGAATGTTTGTGGTAACGAACTACATGGAACA
TCAGGAGTTCGATCGAGATGTCAAACAGGGTAAGGCTGTGGCGGATGCAG
CAAAAGCTTCCGGTGTTCAACACGTGGTGTTCAGTAGCCTTGAAAACGTG
CAGAAGACCATGGGGTTCCCCTGTCTGTTCTACGACTCTAAAGCTGAAAT
CGAGGAGTACATGAAGTCTATTGGCCTTCCGGTCACCATCGTGAAGTATC
CTGCCTACTACGAGAACTACATCAACTTTGGTCCACGGAAACTGGACGAT
GGAACTTATGAGCTAGGATATGCGTTGGAGGGCGCTGCAATGCACGCCGT
CAGTGTTGCCGACATGGGTTTCGCTGTCAGAACGGTGGGGAACGGGAACG
ATCCTCCCAATAGCAGAGACACTATGGCTGGATCAGTTGTAGTTGTTTTC
GGAGCAACAGGGTTACAGGGAGGCGGGGTGGCCAATGCCCTTCTGCAGGA
CTCGGATTTCAAAGTTCGGGCAGTGACAAGAAACGCCTCTAGCGCCAAGG
CTAAGGCACTGCAGGAGAGAGGTGCTGAGCTCGTTGAGGGCAGTTATGAT
GATCCCGGCTCACTGGAGCGGGCACTGCAGGGAGCACACGGAATGTTTGT
GGTAACGAACTACATGGAACATCAGGAGTTCGATCGAGATGTCAAACAGG
GTAAGGCTGTGGCGGATGCAGCAAAAGCTTCCGGTGTTCAACACGTGGTG
TTCAGTAGCCTTGAAAACGTGCAGAAGACCATGGGGTTCCCCTGTCTGTT
CTACGACTCTAAAGCTGAAATCGAGGAGTACATGAAGTCTATTGGCCTTC
CGGTCACCATCGTGAAGTATCCTGCCTACTACGAGAACTACATCAACTTT
GGTCCACGGAAACTGGACGATGGAACTTATGAGCTAGGATATGCGTTGGA
GGGCGCTGCAATGCACGCCGTCAGTGTTGCCGACATGGGTTTCGCTGTCA
GAACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000135 | genome | Sc0000135:29068..32895 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76437_cuf0 |
| Biotype | protein_coding |
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