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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76225_cuf0 >transcript:BL76225_cuf0-protein ID=transcript:BL76225_cuf0-protein|Name=transcript:BL76225_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=280bp
FIMEGTGQAGVPKKLCKFFVVVIFISVGLCYLLATVFDYNSPLPFKPSSH
KMPNRGLFGGHDKEVCDKKLNYMFVKVHKAGSTTTTCILQRFAYENDLTV
ALPMKGHANIGWPHFFKREDIIPSADGTFNVLVDHVVYHKELLHHILPAD
TVYFATLRHPLSHLKSVFNWYHLTTRFHGLDSEHPIRSFLENPTKFEIPY
LTKSRVFFSYTKNYMAFDLGFPIGLSDSKSAVDEFVSRLSKDIHLVLILE
YYNESLVLLRRLMCWKLKDILYDLQPKNIR Run BLAST on NCBI mRNA from alignment at Sc0000065:1385630..1387180+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76225_cuf0 ID=transcript:BL76225_cuf0|Name=transcript:BL76225_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1551bp|location=Sequence derived from alignment at Sc0000065:1385630..1387180+ (Branchiostoma lanceolatum)
CTTTCATTATGGAGGGGACGGGACAGGCGGGAGTGCCTAAAAAACTGTGC
AAGTTTTTCGTGGTAGTTATATTCATCTCCGTTGGACTCTGCTATCTTCT
CGCCACAGTTTTCGATTACAATTCACCACTACCCTTCAAGCCGTCATCTC
ACAAGATGCCCAACAGGTAATTATTCTTTTCATTCCCAACCGCATATTCA
ACAAGAGCCGTGGAGTCGTGTGGGGTCGTGTAGCGTAACGGCAGGGTGTT
CGGCCCAGAACCCAGTGGTCCCGGGCTCGAATCCCCTGACGACGCCGACG
TTTTGCCATTGGGAAAATTCTATAATTCCTATATTTTGCATTATAAACAT
TGGATGCATGTAGGGTAGTGATGTAGGGTAGGCAGATCATTGCTAAATAT
CAATTATTTATGCTTTTATTCTCAGCGGCAATTGTTGGAACATCATACAA
CATGTGACGTATGTTAACAATTTATGAGCTATGACCATCATCATACATAG
ATGATGCAGATATAGACGTCATTTACATAATAGATTAGGAACGATCAACG
ACAACCTCGAAAAACTCTAAGCATTATTTATTTTATTCACATATATTTAA
AAGTATAGGGCAAAAAGCACAGTTGCTTATGTAACGCCTTCTACTCTAAT
ACATAAATATAAAACAAGATTAAAATACATTGACAGCATACATACATAAA
TACAAAATGCATAAAAGAAAAATGAATGTAAAGAAGACAAGTTGGTTATC
TATCAATTACGAGAATCTACCTGTACAGTGAAGGAACGTGTGAACTATGT
CGAAGATATTGCAGCTCTAAGCATTGCGCAGAGGCATGCGAACGTTGATC
TCTTGTTAATTCTGCTTCATCAGGGGATTGTTTGGAGGACATGACAAAGA
AGTCTGCGACAAGAAGCTGAACTACATGTTCGTGAAAGTGCACAAAGCAG
GCAGCACGACAACAACTTGCATCCTCCAACGATTTGCTTACGAGAACGAC
CTGACTGTTGCTCTGCCCATGAAAGGCCACGCTAACATCGGTTGGCCCCA
CTTTTTCAAGCGGGAAGACATCATACCGTCTGCCGACGGTACCTTTAACG
TCCTCGTGGATCATGTCGTCTACCATAAGGAACTGCTGCACCACATTCTG
CCAGCAGACACCGTGTACTTCGCCACTCTAAGACATCCTCTGTCTCACTT
GAAATCTGTCTTCAACTGGTATCACCTTACGACTCGATTTCACGGGTTAG
ATAGCGAACATCCCATAAGGTCGTTCCTTGAAAATCCCACTAAATTTGAA
ATTCCTTACCTCACCAAAAGTAGGGTATTTTTTTCTTACACTAAGAATTA
TATGGCGTTTGACCTAGGTTTCCCCATTGGCCTATCAGACAGCAAATCTG
CTGTTGATGAATTTGTGTCGAGGTTGTCCAAAGATATTCATTTGGTTCTT
ATCTTAGAATATTACAACGAATCTCTTGTACTACTGAGACGTCTCATGTG
TTGGAAGTTAAAAGACATCCTTTACGACCTTCAGCCTAAAAACATACGGA
C Coding sequence (CDS) from alignment at Sc0000065:1385630..1387180+ >transcript:BL76225_cuf0 ID=transcript:BL76225_cuf0|Name=transcript:BL76225_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1680bp|location=Sequence derived from alignment at Sc0000065:1385630..1387180+ (Branchiostoma lanceolatum)
TTCATTATGGAGGGGACGGGACAGGCGGGAGTGCCTAAAAAACTGTGCAA
GTTTTTCGTGGTAGTTATATTCATCTCCGTTGGACTCTGCTATCTTCTCG
CCACAGTTTTCGATTACAATTCACCACTACCCTTCAAGCCGTCATCTCAC
AAGATGCCCAACAGGGGATTGTTTGGAGGACATGACAAAGAAGTCTGCGA
CAAGAAGCTGAACTACATGTTCGTGAAAGTGCACAAAGCAGGCAGCACGA
CAACAACTTGCATCCTCCAACGATTTGCTTACGAGAACGACCTGACTGTT
GCTCTGCCCATGAAAGGCCACGCTAACATCGGTTGGCCCCACTTTTTCAA
GCGGGAAGACATCATACCGTCTGCCGACGGTACCTTTAACGTCCTCGTGG
ATCATGTCGTCTACCATAAGGAACTGCTGCACCACATTCTGCCAGCAGAC
ACCGTGTACTTCGCCACTCTAAGACATCCTCTGTCTCACTTGAAATCTGT
CTTCAACTGGTATCACCTTACGACTCGATTTCACGGGTTAGATAGCGAAC
ATCCCATAAGGTCGTTCCTTGAAAATCCCACTAAATTTGAAATTCCTTAC
CTCACCAAAAGTAGGGTATTTTTTTCTTACACTAAGAATTATATGGCGTT
TGACCTAGGTTTCCCCATTGGCCTATCAGACAGCAAATCTGCTGTTGATG
AATTTGTGTCGAGGTTGTCCAAAGATATTCATTTGGTTCTTATCTTAGAA
TATTACAACGAATCTCTTGTACTACTGAGACGTCTCATGTGTTGGAAGTT
AAAAGACATCCTTTACGACCTTCAGCCTAAAAACATACGGTTCATTATGG
AGGGGACGGGACAGGCGGGAGTGCCTAAAAAACTGTGCAAGTTTTTCGTG
GTAGTTATATTCATCTCCGTTGGACTCTGCTATCTTCTCGCCACAGTTTT
CGATTACAATTCACCACTACCCTTCAAGCCGTCATCTCACAAGATGCCCA
ACAGGGGATTGTTTGGAGGACATGACAAAGAAGTCTGCGACAAGAAGCTG
AACTACATGTTCGTGAAAGTGCACAAAGCAGGCAGCACGACAACAACTTG
CATCCTCCAACGATTTGCTTACGAGAACGACCTGACTGTTGCTCTGCCCA
TGAAAGGCCACGCTAACATCGGTTGGCCCCACTTTTTCAAGCGGGAAGAC
ATCATACCGTCTGCCGACGGTACCTTTAACGTCCTCGTGGATCATGTCGT
CTACCATAAGGAACTGCTGCACCACATTCTGCCAGCAGACACCGTGTACT
TCGCCACTCTAAGACATCCTCTGTCTCACTTGAAATCTGTCTTCAACTGG
TATCACCTTACGACTCGATTTCACGGGTTAGATAGCGAACATCCCATAAG
GTCGTTCCTTGAAAATCCCACTAAATTTGAAATTCCTTACCTCACCAAAA
GTAGGGTATTTTTTTCTTACACTAAGAATTATATGGCGTTTGACCTAGGT
TTCCCCATTGGCCTATCAGACAGCAAATCTGCTGTTGATGAATTTGTGTC
GAGGTTGTCCAAAGATATTCATTTGGTTCTTATCTTAGAATATTACAACG
AATCTCTTGTACTACTGAGACGTCTCATGTGTTGGAAGTTAAAAGACATC
CTTTACGACCTTCAGCCTAAAAACATACGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000065 | genome | Sc0000065:1385630..1387180 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76225_cuf0 |
| Biotype | protein_coding |
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