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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76182_cuf0 >transcript:BL76182_cuf0-protein ID=transcript:BL76182_cuf0-protein|Name=transcript:BL76182_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=674bp
FIQDSVSDQYDKEVEPLCKLSDVYLKRGTQSRDGSDFTKAEALCNAALVR
ARPEDRDGIKQKILRTSQLFVEHVLGIDQGVDIGDTEKHKLKLEESRRHV
EDEIKRIEQEIDPYSLDDDDPKIREVEKKRAEAIITLFQTIVQQRKTFIA
GIVDERMDVMGPPPCKYAMIGLGSQATGLATPYSDLEFAILIEEETEGNV
EYFRNITHYLHLKVINLGETILPSMAIKSLNDFSSDDPRDNWFYDSVTPR
GFAFDGAMPHACKTPLGRGKTCELIHTPSEMTNILKNDLLFYIKKGYHLA
SILGNVCLITGEQDLVDAYSTLWTQQLRSTDGAISMLQAVSMFAEETNID
MFKPKNLTSSLLNVKKEIYRFSTLAVSCWALLRGIQPTTIWETVQKMNMN
GVINTENAHHLTVLVSISAELRLRTYMSNRGQVENMSALSSMSPSADIGD
KLKKVFYFSNTKQLMRYYYTATPFKAFIQQLMNNPPPPLLFDNSPRLQES
VYESLCEYEKAKLCRELALQNDLSKYGENIAHPDIAESLNNLGTALINIG
DRRKAVSYFEQSLQMYRSIYGENTAHPDIASSLNNLGGCWRSLGDHRKAV
SYGKQSLQMMRKIHGMATANPDIAGSLANLGNTWLDLGENRRAVSYHEQA
LQMMQDIYGVDTAHADIAQLLNSL Run BLAST on NCBI mRNA from alignment at Sc0000847:16839..18862- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76182_cuf0 ID=transcript:BL76182_cuf0|Name=transcript:BL76182_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2024bp|location=Sequence derived from alignment at Sc0000847:16839..18862- (Branchiostoma lanceolatum)
NTTCATTCAAGATTCAGTCTCAGATCAGTACGACAAAGAGGTGGAGCCCC
TGTGCAAGCTAAGCGATGTCTACCTGAAGAGAGGAACGCAGTCCAGAGAC
GGAAGTGATTTCACCAAGGCTGAGGCACTCTGTAATGCAGCGCTGGTCAG
AGCAAGGCCAGAAGACAGAGACGGCATCAAACAAAAGATCCTGAGGACTA
GCCAGTTGTTTGTTGAGCACGTGCTGGGGATCGATCAGGGAGTGGACATC
GGAGACACAGAGAAACACAAATTGAAGCTGGAGGAAAGTCGGAGGCATGT
GGAAGATGAGATCAAAAGAATCGAGCAGGAGATAGATCCCTACAGCCTTG
ATGACGATGATCCGAAGATAAGAGAAGTGGAGAAGAAAAGAGCGGAGGCA
ATCATAACATTGTTTCAAACTATTGTTCAACAGAGAAAAACGTTCATAGC
TGGCATTGTAGATGAGCGCATGGATGTAATGGGTCCCCCTCCCTGTAAGT
ACGCCATGATAGGCCTGGGTTCACAGGCTACTGGGTTAGCAACCCCGTAC
TCTGATCTGGAATTCGCCATCTTGATAGAGGAGGAAACAGAGGGTAACGT
CGAATACTTCCGCAACATCACTCATTATCTGCACCTTAAAGTCATCAACC
TGGGAGAAACCATTCTCCCGTCCATGGCGATTAAGTCGCTCAACGATTTC
TCCTCAGACGACCCGCGGGACAACTGGTTCTACGACTCTGTCACACCGCG
CGGGTTTGCGTTCGATGGAGCCATGCCGCATGCATGCAAGACTCCACTGG
GCAGGGGTAAAACTTGCGAACTTATCCACACACCGAGCGAGATGACAAAC
ATCTTAAAGAATGACTTGTTGTTTTACATAAAGAAAGGCTACCATCTGGC
CAGCATATTGGGGAACGTGTGTTTGATCACAGGAGAACAGGACTTGGTGG
ATGCGTACTCCACTTTATGGACTCAGCAACTCCGAAGTACTGATGGAGCA
ATATCTATGTTACAAGCAGTGAGCATGTTTGCAGAAGAAACAAACATTGA
CATGTTTAAACCCAAAAACCTAACATCTAGTCTGCTGAACGTCAAGAAAG
AAATCTATCGATTTTCAACCCTTGCGGTGTCGTGTTGGGCACTACTCCGT
GGTATACAACCCACCACAATCTGGGAGACTGTTCAGAAGATGAACATGAA
CGGAGTCATCAACACTGAGAACGCGCATCACTTGACGGTGCTGGTCAGCA
TCTCAGCAGAACTGAGGCTGCGGACGTACATGAGCAACCGTGGGCAGGTG
GAGAACATGTCAGCCTTATCGTCTATGTCTCCTAGCGCAGATATTGGGGA
CAAGTTGAAGAAAGTGTTTTACTTCTCAAACACCAAACAACTGATGAGAT
ATTATTACACAGCAACACCATTCAAGGCCTTTATTCAACAACTCATGAAT
AACCCACCACCGCCACTTTTGTTTGACAATTCGCCAAGATTACAAGAAAG
CGTATATGAAAGTCTGTGTGAGTACGAAAAAGCGAAACTGTGCAGGGAAT
TGGCACTGCAAAATGATCTCTCTAAATATGGCGAGAACATCGCACATCCG
GACATCGCCGAGTCACTCAACAACTTGGGTACCGCCTTGATTAACATTGG
TGATCGCAGGAAAGCTGTCAGTTATTTTGAACAGTCACTACAGATGTACA
GGAGTATCTATGGTGAAAACACTGCACATCCTGACATCGCGTCGTCACTT
AACAACTTAGGTGGCTGCTGGAGGTCCCTTGGTGACCACAGAAAGGCCGT
CAGCTATGGCAAACAGTCACTACAGATGATGCGGAAAATCCATGGTATGG
CCACCGCAAATCCTGACATCGCCGGGTCACTTGCCAACTTAGGCAACACC
TGGCTTGATCTTGGCGAAAACAGAAGAGCTGTCAGCTATCATGAACAGGC
ACTTCAGATGATGCAGGATATCTATGGTGTGGACACCGCACACGCTGACA
TCGCCCAGTTACTCAACAGCCTGG Coding sequence (CDS) from alignment at Sc0000847:16839..18862- >transcript:BL76182_cuf0 ID=transcript:BL76182_cuf0|Name=transcript:BL76182_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2022bp|location=Sequence derived from alignment at Sc0000847:16839..18862- (Branchiostoma lanceolatum)
TTCATTCAAGATTCAGTCTCAGATCAGTACGACAAAGAGGTGGAGCCCCT
GTGCAAGCTAAGCGATGTCTACCTGAAGAGAGGAACGCAGTCCAGAGACG
GAAGTGATTTCACCAAGGCTGAGGCACTCTGTAATGCAGCGCTGGTCAGA
GCAAGGCCAGAAGACAGAGACGGCATCAAACAAAAGATCCTGAGGACTAG
CCAGTTGTTTGTTGAGCACGTGCTGGGGATCGATCAGGGAGTGGACATCG
GAGACACAGAGAAACACAAATTGAAGCTGGAGGAAAGTCGGAGGCATGTG
GAAGATGAGATCAAAAGAATCGAGCAGGAGATAGATCCCTACAGCCTTGA
TGACGATGATCCGAAGATAAGAGAAGTGGAGAAGAAAAGAGCGGAGGCAA
TCATAACATTGTTTCAAACTATTGTTCAACAGAGAAAAACGTTCATAGCT
GGCATTGTAGATGAGCGCATGGATGTAATGGGTCCCCCTCCCTGTAAGTA
CGCCATGATAGGCCTGGGTTCACAGGCTACTGGGTTAGCAACCCCGTACT
CTGATCTGGAATTCGCCATCTTGATAGAGGAGGAAACAGAGGGTAACGTC
GAATACTTCCGCAACATCACTCATTATCTGCACCTTAAAGTCATCAACCT
GGGAGAAACCATTCTCCCGTCCATGGCGATTAAGTCGCTCAACGATTTCT
CCTCAGACGACCCGCGGGACAACTGGTTCTACGACTCTGTCACACCGCGC
GGGTTTGCGTTCGATGGAGCCATGCCGCATGCATGCAAGACTCCACTGGG
CAGGGGTAAAACTTGCGAACTTATCCACACACCGAGCGAGATGACAAACA
TCTTAAAGAATGACTTGTTGTTTTACATAAAGAAAGGCTACCATCTGGCC
AGCATATTGGGGAACGTGTGTTTGATCACAGGAGAACAGGACTTGGTGGA
TGCGTACTCCACTTTATGGACTCAGCAACTCCGAAGTACTGATGGAGCAA
TATCTATGTTACAAGCAGTGAGCATGTTTGCAGAAGAAACAAACATTGAC
ATGTTTAAACCCAAAAACCTAACATCTAGTCTGCTGAACGTCAAGAAAGA
AATCTATCGATTTTCAACCCTTGCGGTGTCGTGTTGGGCACTACTCCGTG
GTATACAACCCACCACAATCTGGGAGACTGTTCAGAAGATGAACATGAAC
GGAGTCATCAACACTGAGAACGCGCATCACTTGACGGTGCTGGTCAGCAT
CTCAGCAGAACTGAGGCTGCGGACGTACATGAGCAACCGTGGGCAGGTGG
AGAACATGTCAGCCTTATCGTCTATGTCTCCTAGCGCAGATATTGGGGAC
AAGTTGAAGAAAGTGTTTTACTTCTCAAACACCAAACAACTGATGAGATA
TTATTACACAGCAACACCATTCAAGGCCTTTATTCAACAACTCATGAATA
ACCCACCACCGCCACTTTTGTTTGACAATTCGCCAAGATTACAAGAAAGC
GTATATGAAAGTCTGTGTGAGTACGAAAAAGCGAAACTGTGCAGGGAATT
GGCACTGCAAAATGATCTCTCTAAATATGGCGAGAACATCGCACATCCGG
ACATCGCCGAGTCACTCAACAACTTGGGTACCGCCTTGATTAACATTGGT
GATCGCAGGAAAGCTGTCAGTTATTTTGAACAGTCACTACAGATGTACAG
GAGTATCTATGGTGAAAACACTGCACATCCTGACATCGCGTCGTCACTTA
ACAACTTAGGTGGCTGCTGGAGGTCCCTTGGTGACCACAGAAAGGCCGTC
AGCTATGGCAAACAGTCACTACAGATGATGCGGAAAATCCATGGTATGGC
CACCGCAAATCCTGACATCGCCGGGTCACTTGCCAACTTAGGCAACACCT
GGCTTGATCTTGGCGAAAACAGAAGAGCTGTCAGCTATCATGAACAGGCA
CTTCAGATGATGCAGGATATCTATGGTGTGGACACCGCACACGCTGACAT
CGCCCAGTTACTCAACAGCCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000847 | genome | Sc0000847:16839..18862 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76182_cuf0 |
| Biotype | protein_coding |
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