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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76019_cuf0 >transcript:BL76019_cuf0-protein ID=transcript:BL76019_cuf0-protein|Name=transcript:BL76019_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=121bp
GRQCQPALTAPANGARTPATGATSYQDTVTFTCNTGYRLDGVATLTCQAD
GTWSNPAPTCRPGQCPLLVAPTNGARTPPTGATSFQDVVQFTCDAGYTRN
GAASATCQAGGTWSNAVPTCT Run BLAST on NCBI mRNA from alignment at Sc0000002:3953495..3961687+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76019_cuf0 ID=transcript:BL76019_cuf0|Name=transcript:BL76019_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=8193bp|location=Sequence derived from alignment at Sc0000002:3953495..3961687+ (Branchiostoma lanceolatum)
GGCAGACAATGTCAGCCGGCGCTGACGGCCCCAGCTAATGGAGCGCGGAC
ACCCGCTACCGGAGCGACCTCCTACCAGGACACGGTGACGTTCACCTGTA
ACACGGGATACCGACTGGACGGCGTTGCTACTTTGACGTGCCAAGCTGAC
GGAACATGGAGTAATCCCGCACCAACATGTAGACGTGAGACGACCTTTAA
CTATTAAAAGTCAGCAAAGAAACGTAATTTATGCACAATTTATGAACATG
GATACATAGATGGGATAATAAAATCGTAGAGTAACTTTTTCGAGCGAATA
CACATTTATTGCGCGGCGGCCATTGTGGCAAATATTAGACCGATCTAACT
TTCCATCACAATTAGCAGTTCAGCCAATGATTACATGATAATTAGAGAAT
CGACCAATGATGAAGTGACTGCATGCCAGTCAAATATCTGCATTTCTATG
TTTTTATTTTGCATTTCTACGTTTTGACTGAGGGGGCGAGGCCTTTTGGG
TCGGCCATTATGGCTTTTAACGGCTCCATATTTTATGTGCATTACACTAG
TTGTAATATTGATAATTGGATATTGTATTCTAAAACGTAATGGAATTTGG
AAGGAAAACTATATCTTTAAATTATTTTTGTTTCCTTGCCTCATTGGCCT
CGACTTCATTCTATCATGTCCGCCGCGTGAGAAAGGTAAATAGGGCGTCC
CATTTTCTCATTCTCAAGGGGTATACCGTACAGACGATCTGCCTCTGTAT
CAACACTGGATAACATCCCTTTAGTCAGGTGCCCAGGGAGTGGTACTGCG
CATGCGCAGCTATTGCCGATTGCCCCGTCGTTGGGAGACCTCCTTCCTGA
ACTTCACCGGATCTGATATTTGAGTGGTTAGAGAGTACATATCAAAGACT
GTTCCTGGAAAGTAGGAGTATCTGTGGCAGCCCTTGTGGAAGTTGATTGG
TCTGTATGAGTTTTGATGATTGTGTGACGCCATTGGCGTGGGATTGACTG
TAGACATGTGTCGACCGACAGGGCCAGGAGGCCCTGTCTTGATTTCTATA
GAATGTCTAGAACCAATATCGCTCCATGTAACATCAGTATGTAGCTCTCT
AAAAGGTTCCTGAAAAGACTTGTTAAAACAATTTCAGGCATCTGTCCAAC
ATTGGCGGCCCCAACTAACGGAGCGCGGACACCCCCTACCGGAGCGACCG
CCTTCCAGGACGTGGTCACGTTCAGCTGTAACTCGGGATACGTCCTAAAC
GGCGCTGCTACTAGGACGTGCCAAGCTGACGGAACATGGAGTAACACTGC
TCCAACATGCAATCGTAAGGCGACGTGCAAGTTTATATTTATACATGCTC
TAGCAATATCCATTCACCAGATAGTAAAGGGAGTATTAGAAGCAAATTGC
ATGACCTCTATGTATTAAAAACATGACAGACAGGCATAGATTACAATGCG
TAATTTTGCGCATCTTCAGTAAATAAATAGATCCCCATAATAAAAGGTAG
TTGAATATTTCAGCCAGACCATGCCCGACGCTGACGGCCCCAACTAACGG
AGCGCTGAGTCCTCTCGGACCACACGCCTTCCCGGCCGTAGTCACGTTCA
CCTGTAACTCGGGATACGTACGGAACGGCGTTCAAACTACGACGTGCCAA
GATGACGGAACATGGAGTAACCCTACTCCTCCAACATGCATACGTAAGAT
GACTTCCAAATTGATATAAACTTAGCCTAGCCAACCTCATCTAACAGGGT
CGAATCTCTCGGCAAGAAAGCCTCCAGAATCTACCCAGATCTTCTGGCCC
AAGGTTTGAGGTATTGGTGACTTATAACTGACAGTTGCTTATAAACTATT
AATGAGCTAGCCTTATTTGGTACAAACAGCCGTTAGTTGCTCATGCATAA
TTAATGAGCTAGCCTTATTTGGCAAAAACAGCCGTTATGTAGATGTACGA
CGTAAACTGATTGGCCGATAGCTTCCAGGAAACCCTCTGATTGGCTGAAA
GTTGTTTGGTGGTGACCTCACCATTACTCGAATTGGCCGGGCTGAATAGC
AGGGCTAAAAACGGGAGGTTATAACCCGAGCGGTTTTAGCCATGCTAAGG
AGGGTGAGCCTAGCAATGTCAATCGAATCGTAGTATATAGACAATCACCA
GGTATTAAACAGAGTATCGGAAATAAATTGCGTGAACTTTCCGTCTTCAA
AACTGGATGGACAGGCAATGGTAAAAAAGGTGTCTTGTTTGCATCTGTAG
TACGGAGATAGTTCCCCGTGATAAAAGGTTGTCCACTTTCAGCTGGACAA
TGTTCGACGTTGGCGGCACCAGCTAACGGAGCACGCACGCCCCCTACCGG
AGCGACCAACTTCCAGGACACTGTCACGTTCACCTGTGACGCGGGATACG
TGCTGAACGGAGCTGCTACTTCGACGTGCCAAGCTGGCGGAACATGGAGC
AACCCTGTTCGAACATGCACACGTAAGTTGAGCTTGACAGTAACAGATAC
AAACAATTTCTATGAAATACTGCTCTCAATGTTAAAACTCTGGCAAAAAG
GCCACAAAGAAACCGTAGTTAAATAAGACTACAGTTGATAGTGGTAAGAG
CATTAAACGGGGGACACTTATCAGTATCTAAATGTCTAAAAGAAGACGTT
ACTCTATGTACAAATCTTACAGGTTTCTGAACAAGACTGTTTAATCATTT
CAGCCAGACAATGTTCGCCAGTGTTGACGGCCCCAGCTAACGGAGCGCTG
AGTACGACAGCTAGGACCTTCCAGACTGTGGTGACGACCACCTGTGACAC
GGGATACACACCGGACGGCGTCGCTACCACGACGTGCCAAGCTGACGGAA
CATGGACTAACGCTGTACCAGCATGTAGACGTAAGATGACTTTTAACTGA
TTAAGTGATATCCACAACGAAATGTAAATTGTTCTGAACATTTATTTAAA
AGGTTCTTTATACACCTAAATACGAATGAAATAAATAAATAAGAGGTAGA
ATAACTTTTTGAAGAGTATATGGCATCGCGGTTTTTGATATTCCTGAGGT
ACTGTACATGCGTTTGATAATGAATATAGCTTGTTTCATGCAACATTAGC
ATGTGGATGCCTTGAAGTTCCTTGAGCAAGACTATTTCACAATTTTAGCA
ATATGTCTGCGTTTGGATCGCTTAGTCCTTCTGGGCCTACTAGACTCTGG
TCTCATTATCAACTGGCGTCGTTTTGCACATATATTCAGTACATGAACAA
AGCCCCCTAAGAAAAGGTTCTTGACCATTTCAGTCGTACAATGTCCGGCG
CTGACGGCCCCAGCTAACGGAGCACGGACACCCGCTACCGGATCCAACTC
TTACCAGAACACGGTGACCTTCACATGTGACACGGGATACGTACTGAATG
GAGCCGCTAGTGTGACGTGCCAAGCTGACACAACATGGACTGATGTTGTT
CCAACATGCACACGTAAATGAATTTCAACTAACCGATAGTGACAGCAAAA
TGCAACCAATACATGTTTCAATACTCGAGTGATTCTATACAGACGCTTGC
TACTTAATATCGCTTAATGTGTTATTACTATGTATATCCTTGACCATAAC
TATCTATCCTTTTCAGGCAGACAATGTCAGCCGGCGTTGACGGCCCCAGC
TAACGGAGCGCGGACACCCGCTACCGGAGCGACCTCCTACCAGGACACGG
TGACGTTCACCTGTAACACGGGATACCAACTGAACGGCGCTGCTACTGTG
ACGTGCCAAGCTGACGGAACATGGACTGCTCTTCGTCCAACATGCACACG
TGAGACGACTTTTAACTATTACATACCTTTATCGTTAACTCGTCGACAAT
ATTTAAACAAATTTGGTGCCTTTATCCGGCATCAATGACAATGCGCCGTG
CAGATATGCGAAGTCAAGAACAATAGAGCGAATGGGAACTGCCTAAAATG
ATTTCATCCGGTTGGTAGAATATAGGCTATGATTGGGAACTAGTTTGGGA
TTTTGGGATTCGGTGGAATGAAATGGAGTGTGTGTTTATCCGATGTGAAA
TTAAGTGGACTCTACTGTATCAGCAAAGAAGCGTAATTTATGCACTTGAA
TATGGATACATAGATGGAATAATCAAATCGTAGATTACCCTTTTCGAGCG
AATACACCTTTCTCACGCGGCAGTCATTGTAGCAAATATCAGATCGATCC
TAATTGTCCATCATAATTAGCAGTTCAGCCAATGATTACATGATAATTAG
AGAATCGACCAATGATGAAGTGGCTGCATGTCCGTCAGACATCTGCATTT
CTATGGGTTTTTTTGTTGTTGCATTTCTAAGTTTTGACGGAGGAGGGCGG
GGCCTATGGGGTCGGTCAATATGGCTCAAAATTGCTCCATATTTCTGTGC
ATTACACTATAGTTATAATATTGATAATTGGATATCATATTTTAGAACGT
ATTGGGATTTGGAAGGCCTCGTCTTCATTCTATCATGTCCTCCGCGTGAG
AAATGTAAATAAGGCGTCCCGTTTTCTAATTTTCTAATTCTCAAGGGGTA
TACCGTACAGACGATCTGCCTCTGGATCAATACTGGATAACATCCCTTTA
GTTGGGGTCAATCGCCCAGGGAGTGGTACTGCGCAGCTATTGCCGTTTCC
TCAGGTGTTGGGAGACCTCCTTCCTGAACTTCACCGGATCTGATATTTGA
GTGGTTAGAGAGTACATATCAAAGACTGTTCCTGGAAAGTAGGAGTATCT
GTGGCAGCCCTTGTGGAAGTTGATTGGTCTGTATGAGTTTTGATGATTGT
GTGACGCCATTGACGTGGGATTGACTGTAGACATGTGTCGACCGACAGGG
CCAGGAGGCCCTGTCTTGATTTCTATAGAATGTCTAGAACCAATATCGCT
CCATGTAACATCAGTATGTAGCTCTCTAAAAGGTTCCTGAAAAGACTTGT
TGAAACAATTTCAGGTATCTGTCCAACATTGGCGGCCCCAACTAACGGAG
CGCGGACACCCCCTACCGGAGCGACCGCCTTCCAGGACGTGGTCACGTTC
AGCTGTAACTCGGGATACGTCCTAAACGGCGCTGCTACTAGGACGTGCCA
AGCTGACGGAACATGGAGTAACACTGCTCCAACATGCAATCGTAAGGCGA
CGTGCAAGTTTATATTTATACATGCTCTAGCAATATCCATTCACCAGATA
GTAAAGGGAGTATTAGAAGCAAATTGCATGACCTCTATGTATTAAAAACA
TGACAGACAGGCATAGATTACAATGCGTAATTTTGCGCATCTTCAGTAAA
TAAATAGATCCCCATAATAAAAGGTAGTTGAATATTTCAGCCAGACCATG
CCCGACGCTGACGGCCCCAACTAACGGAGCGCTGAGTCCTCTCGGACCAC
ACGCCTTCCCGGCCGTAGTCACGTTCACCTGTAACTCGGGATACGTACGG
AACGGCGTTCAAACTACGACGTGCCAAGATGACGGAACATGGAGTAACCC
TACTCCTCCAACATGCATACGTAAGATGACTTCCAAATTGATATAAACTT
AGCCTAGCCAACCTCATCTAACAGGGTCGAATCTCTCGGCAAGAAAGCCT
CCAGAATCTACCCAGATCTTCTGGCCCAAGGTTTGAGGTATTGGTGACTT
ATAACTGACAGTTGCTTATAAACTATTAATGAGCTAGCCTTATTTGGTAC
AAACAGCCGTTAGTTGCTCATGCATAATTAATGAGCTAGCCTTATTTGGC
AAAAACAGCCGTTATGTAGATGTAAGACGTAAACTGATTGGCCGATAGCT
TCCAGGAAACCCTCTGATTGGCTGAAAGTTGTTTGGTGCGGACCTCACCA
TTACTCGAATTGGCCGGGCTGAATAGCAGGGCTAAAAACGGGAGGTTATA
ACCCGAGCGGTTTTAGCCATGCTAAGGAGGGTGAGCCTAGCAATGTCAAT
CGAATCGTAGTATATAGACAATCACCAGGTATTAAACAGAGTATCGGAAA
TAAATTGCGTGAACTTTCCGTCTTCAAAACTGGATGGACAGGCAATGGTA
AAAAAGGTGTCTTGTTTGCATCTGTAGTACGGAGATAGTTCCCCGTGATA
AAAGGTTGGCCCATTTCAGCTGGACAATGTTCGACGTTGGCGGCACCAGC
TAACGGAGCACGCACGCCCCCTACCGGAGCGACCAACTTCCAGGACACTG
TCACGTTCACCTGTAACGCGGGATATGTGCTGAACGGAGCTGCTACTTCG
ACGTGCCAAGCTGGCGGAACATGGAGCAACCCTGTTCGAACATGCACACG
TAAGTTGAGCTTGACAGTAACAGATACAAACAATTTCTATGGAATACCGC
TCTCAATGTTAAAACTCTGGCAAAAAGGCCACAAAGAAACCGTAGTTAAA
TAAGACTACAGTTGATAGTGGTAAGAGCATTAAACGGGGGACACTTATCA
GTATCTAAATGTCTAAAAGAAGACGTTACTCTATGTACAAATCTTACAGG
TTTCTGAACAAGACTGTTTAATCATTTCAGCCAGACAATGTTCGCCAGTG
TTGACGGCCCCAGCTAACGGAGCGCTGAGTACGGCAGCTAGGACCTTCCA
GACTGTGGTGACGACCACCTGTGACACGGGATACACACCGGACGGCGTCG
CTACCACGACGTGCCAAGCTGACGGAACATGGACTAACGCTGTACCAGCA
TGTAGACGTAAGATGACTTTTAACTGATTAAGTGATATCTACAACGAAAT
GTGAATTGTTCTGAACATTTATTTAAAAGGTTCTTTATACACTTAAATAC
GAATGAAATGAATAAACAAGAGGTAGAATAACTTTTTGAAGAGGATATGG
CATCGCGGTTTCTGATATTCCTGAGGTATGTATATCCTTGACCATGACTA
TCTATCCTTTTCAGGCAGACAATGTCAGCCGGCATTGACGGCCCCAGCTA
ACGGAGCGCGGTCACCCGCTACCGGAGCGAACTCCNGAGCTAGCCTTATT
TGGTACAAACAGCCGTTAGTTGCTCATGCATAATTAATGAGCTAGCCTTA
TTTGGCAAAAACAGCCGTTATGTAGATGTAAGACGTAAACTGATTGGCCG
ATAGCTTCCAGGAAACCCTCTGATTGGCTGAAAGTTGTTTGGTGCGGACC
NCTGTTCCAACATGTAGACGTGAGAAGACCTTTTACTATTAAATATCAGC
AAAGAAACGTAATTTATACACTTGAATATGGATACAGAGATGGGAAAATA
AAATCGTGGAGTAACTTTTTCGAGCGAATACACATTTCTTAAGCGGTGGC
CATTGGCAAACATTAGACCTGTCCATCACAATTAGCAGTTCAGCAAATGA
TTACATGGTAATTAGAGAATCGACCAATGATGAGGAAGTGGCTGCATGTC
AGTCAAATCTTTGCATTTCTATGGTTTTCTGTTGCATTTCTACGTTTTGA
CAAAGGAGGGCGGGGCCTATGGGGTCGGTCAATATGGTTCTAAATTGCTC
CATCTTTTCTGTTGTACACTAGTTGTAATATTGATAATGGTCTTTAGGGA
TAGAACACCATTAGGAGAAAAGAGATGGGCAAAACTAAAAGCCAATTTGG
TTTGATTACATGGATGGCATTCTCTGGGAACGCAAAAACTGATGCAAGCG
TGCGAATAAGAAAAGAATTGGCAAAAAATAGTTGCACTTCTCATGAATTC
TACGTGGTCTGATGATGAACAAAACCAACACAGAGTATGGTATAGCAGAT
TGCTTATTTTTGTTCTTTCACATCTTCTTCTTTGACATTGGAATTGACTT
TGGTATTCTATGACATTAGTATCCGTTTTCCGAAATATTTTTTCCTGCAA
TTTACAGCATATATTTTCTCATTTTTCACCTACTTTGAATATTTTCTAGG
GGGGGGGGGCGGAAATTGATGCGCTCACGGATGTCATCCATATAATCAAA
TCGACATGGCCTTAATATACGTCGCCAGAAAGATCTTGACCAAGACCTGC
TTATCATTTCAGCCGGACAATGTCCGCTGTTGGTGGCCCCAACCAATGGA
GCGCGGACACCCCCTACCGGAGCGACCTCCTTCCAGGATGTGGTCCAATT
CACCTGTGACGCTGGATACACACGGAACGGCGCTGCTTCTGCGACGTGCC
AAGCTGGCGGAACATGGAGTAACGCTGTTCCAACATGCACGCG Coding sequence (CDS) from alignment at Sc0000002:3953495..3961687+ >transcript:BL76019_cuf0 ID=transcript:BL76019_cuf0|Name=transcript:BL76019_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=726bp|location=Sequence derived from alignment at Sc0000002:3953495..3961687+ (Branchiostoma lanceolatum)
GGCAGACAATGTCAGCCGGCGCTGACGGCCCCAGCTAATGGAGCGCGGAC
ACCCGCTACCGGAGCGACCTCCTACCAGGACACGGTGACGTTCACCTGTA
ACACGGGATACCGACTGGACGGCGTTGCTACTTTGACGTGCCAAGCTGAC
GGAACATGGAGTAATCCCGCACCAACATGTAGACCCGGACAATGTCCGCT
GTTGGTGGCCCCAACCAATGGAGCGCGGACACCCCCTACCGGAGCGACCT
CCTTCCAGGATGTGGTCCAATTCACCTGTGACGCTGGATACACACGGAAC
GGCGCTGCTTCTGCGACGTGCCAAGCTGGCGGAACATGGAGTAACGCTGT
TCCAACATGCACGGGCAGACAATGTCAGCCGGCGCTGACGGCCCCAGCTA
ATGGAGCGCGGACACCCGCTACCGGAGCGACCTCCTACCAGGACACGGTG
ACGTTCACCTGTAACACGGGATACCGACTGGACGGCGTTGCTACTTTGAC
GTGCCAAGCTGACGGAACATGGAGTAATCCCGCACCAACATGTAGACCCG
GACAATGTCCGCTGTTGGTGGCCCCAACCAATGGAGCGCGGACACCCCCT
ACCGGAGCGACCTCCTTCCAGGATGTGGTCCAATTCACCTGTGACGCTGG
ATACACACGGAACGGCGCTGCTTCTGCGACGTGCCAAGCTGGCGGAACAT
GGAGTAACGCTGTTCCAACATGCACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:3953495..3961687 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76019_cuf0 |
| Biotype | protein_coding |
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