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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75932_cuf0 >transcript:BL75932_cuf0-protein ID=transcript:BL75932_cuf0-protein|Name=transcript:BL75932_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=280bp
MCVTSPSTKETQSPTSGKLLTWISSYLLNRSMKVVLSGQSSTTTPINASV
PLGSILGPLLFSVYIDDLGDECENPLYLYADDSTLYCVIRTTNDSSTTTA
SLNRDLERMRCWAGKWKVTFEPTKCKAMTISRKRCPTKIDLFFGNTKLAE
KDDLEILRVTIDNKLTWTKHISNVNIAARAGQRLGALRRVAHKLNAKGRA
TLQGSGTQHHGICITVLNEFPYHLTKAPGLHPEKGTPHHRRERTTNRPDS
NLPSRHFTIDARWPLYPYSTRCTPTSAHQT Run BLAST on NCBI mRNA from alignment at Sc0000236:293901..296290+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75932_cuf0 ID=transcript:BL75932_cuf0|Name=transcript:BL75932_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2390bp|location=Sequence derived from alignment at Sc0000236:293901..296290+ (Branchiostoma lanceolatum)
CATGTATGCCATGGTGGTAGTGTTTTAGTAGCAAGTCATTATATTCAGTA
GTCCTTATTGAAGGCTCGGAACTGTGAAAAAGTTTAGGTTTCGCTAATTT
CTTCACATGATAAGTTGAATCTACCTCACAGANTGAATCTACCACACAGA
TTGCCTAGTGACCCTGGGAGTTGCCCCTGTAGATTAAAAAATGAGCAGGT
CAACACAGTGTTTGCCTATAGGCTAGACCCAAGTAGCGCTCAAAGGGAAT
AAAGTTCATTGGCTACTAGAGTTAAGTCCCCATTCTTGGAACTGTCATGC
TTGTCCTGTAGCAGGGAATTCAAAGCACTGAACTTTGTTCCTTAGCCTCC
TTAGCACACTTTCATAGCTTTTTGTTTGCCTCAGTGTACAATCAGTAAAC
AGCGCGTAATACACCAGTTTCCAGTTTAAAAGGTCAAAGGTCATTGGGAG
CACTTCAAGGCTGGCCCATTCTTATATATAGTAATGGGCAAAGCACAGTT
CCTGTTTCAACTGTGCTTTGCCCATGGCACAGTCCCAGACCAGCGGAAAT
GTGCGTCACATCCCCATCCACAAAAGAGACTCAAAGTCCAACCTCTGGCA
AGTTGCTGACCTGGATCTCGAGCTATCTCCTTAATCGTTCCATGAAAGTA
GTCCTATCTGGCCAGTCATCAACCACCACACCTATCAACGCTTCTGTTCC
CCTAGGCTCCATCCTGGGACCCCTGCTGTTCTCAGTTTACATTGATGACC
TTGGGGATGAATGTGAGAACCCCCTATACCTGTATGCAGATGACTCCACT
CTGTACTGTGTAATCAGAACAACCAACGACAGTAGCACTACTACTGCCAG
CTTAAACAGAGACCTTGAAAGAATGAGATGTTGGGCTGGCAAATGGAAAG
TGACTTTTGAACCCACAAAATGCAAAGCCATGACCATCTCTCGCAAGAGG
TGCCCAACTAAGATAGATCTCTTCTTCGGCAACACCAAACTAGCCGAGAA
GGACGACCTGGAAATACTAAGGGTAACAATCGACAATAAGCTCACATGGA
CCAAACACATCTCCAACGTTAACATTGCCGCTAGAGCAGGTCAGAGGCTT
GGAGCTTTGAGGCGAGTTGCCCACAAGCTCAACGCCAAAGGAAGAGCAAC
ACTACAAGGCTCAGGTACGCAGCATCATGGAATATGCATCACTGTGCTGA
ATGAGTTCCCCTACCACCTCACTAAAGCTCCTGGACTCCATCCAGAGAAA
GGCACTCCGCATCATAGGCGTGAACGAACAACAAACAGGCCAGACTCAAA
TTTACCATCCCGTCACTTCACCATAGACGCCAGGTGGCCGCTGTATCCTT
ACTCTACAAGATGCACGCCAACCAGTGCCCACCAGACCTGAAGAAGTTGC
TGCCTCAGCCGTTCACACCCAGACGTACAACACGCTCCAGCCAAGCTATG
CCAAGACACGCTCTCACCGAACCTGTCTCCCGAACTCACACAACAGGCAG
GACATTTGTACATGCATCAGTCAGCACCTGGAATGTACTCCCGGACAGTG
TGGTCCAAGACATTAGCACATGCGGCCTTCAATCCTTCAAGACCCGTGCC
CATCGCTACCTCCTACAAAAGCAAGAACACTTGGCAGCTGTGAACCACTG
ATTGGTCACTGGACTGGATTGCTAATAGTGATTTTCTGTCTAGTGACTTT
TGTTCACAATAGCACGTTATAGAAAAAAGGCAAGGTGATTGGTGCAAAAA
ATAACAGTAAGTGCATGAACATTGCATGCAATAAAAGTTATATTTCTAAA
ATCAGATTTTATCTACATGACAACCGTGGCTAGGCAACATTTTTCCCTGA
CAACCAGTACCCTTAATAGCTAGTATTTGTCATATCATATATGTAAAGAC
ATGTCTATATATATGTATAGATATGTATATATAGTAATAGTATAGACATT
TGATTGTGAAAGAACAAGAGAATAGAACACCTGTTCTAGCTTCTGCTCTT
AATTCCGTTTTAGATCCAATTCGTCTCAGATAAGTTCTATTTTTTTCTTT
GATTATAAATATCTTATGATGTAAGCTGAAGGTATAGAAAGCAGTGCTGC
TTGTATAGAATAGAAGTATCAGGGCATCCCACGATTGAAAATAAAACATA
ACTGCTACAGCACTGAACCCGTAAGTCTGCTTTGCTAAAGTTGAGGCCCA
CAAAAGTTAAGGCATCTTCGAAGAGGTAATTGTATAGCTTGACGCATGTG
AAACGTCATGCCTTTATTTCAAACCAGTTACTTGGTGTTCCTAAGTACTG
ACAGGTAGCACACAGAGTCAAGAATCGGCGTTTCATACGTCGGTTTCATA
ATGCTCGCTCCTACTGCAGAGTAGTGAGCAGAAGATCAGC Coding sequence (CDS) from alignment at Sc0000236:293901..296290+ >transcript:BL75932_cuf0 ID=transcript:BL75932_cuf0|Name=transcript:BL75932_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=843bp|location=Sequence derived from alignment at Sc0000236:293901..296290+ (Branchiostoma lanceolatum)
ATGTGCGTCACATCCCCATCCACAAAAGAGACTCAAAGTCCAACCTCTGG
CAAGTTGCTGACCTGGATCTCGAGCTATCTCCTTAATCGTTCCATGAAAG
TAGTCCTATCTGGCCAGTCATCAACCACCACACCTATCAACGCTTCTGTT
CCCCTAGGCTCCATCCTGGGACCCCTGCTGTTCTCAGTTTACATTGATGA
CCTTGGGGATGAATGTGAGAACCCCCTATACCTGTATGCAGATGACTCCA
CTCTGTACTGTGTAATCAGAACAACCAACGACAGTAGCACTACTACTGCC
AGCTTAAACAGAGACCTTGAAAGAATGAGATGTTGGGCTGGCAAATGGAA
AGTGACTTTTGAACCCACAAAATGCAAAGCCATGACCATCTCTCGCAAGA
GGTGCCCAACTAAGATAGATCTCTTCTTCGGCAACACCAAACTAGCCGAG
AAGGACGACCTGGAAATACTAAGGGTAACAATCGACAATAAGCTCACATG
GACCAAACACATCTCCAACGTTAACATTGCCGCTAGAGCAGGTCAGAGGC
TTGGAGCTTTGAGGCGAGTTGCCCACAAGCTCAACGCCAAAGGAAGAGCA
ACACTACAAGGCTCAGGTACGCAGCATCATGGAATATGCATCACTGTGCT
GAATGAGTTCCCCTACCACCTCACTAAAGCTCCTGGACTCCATCCAGAGA
AAGGCACTCCGCATCATAGGCGTGAACGAACAACAAACAGGCCAGACTCA
AATTTACCATCCCGTCACTTCACCATAGACGCCAGGTGGCCGCTGTATCC
TTACTCTACAAGATGCACGCCAACCAGTGCCCACCAGACCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000236 | genome | Sc0000236:293901..296290 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75932_cuf0 |
| Biotype | protein_coding |
|
