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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75895_cuf0 >transcript:BL75895_cuf0-protein ID=transcript:BL75895_cuf0-protein|Name=transcript:BL75895_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=305bp
AKFKMADTTKVFDTQADISYSPNEWEPTVPGWSRKPGIQSLYTDNLLQYK
ELAPDTKIKKHMESSFQPKMLARFIYNSNEFEDAGLDEIETHTIVLSLHN
TRTVAAELEEKAKHLGNERIQHLEVVNHYMAINHAFTNLHHPLTVRKLLQ
LHRTLMNRLDTTAGRLRTQEVHSSNGHSYPSAYLVPKTLTTILNQFNHLY
SRTDICMYTKAAFLKFKVVQLHPFMDGNGRLSRILMNWVLHTEGLPFAVS
ITNDGHKKAKGHYMQALKSADRDRAKGHVAFLIQYCATNCWKLFHSEVEK
FDDRA Run BLAST on NCBI mRNA from alignment at Sc0000271:273527..276104- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75895_cuf0 ID=transcript:BL75895_cuf0|Name=transcript:BL75895_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2578bp|location=Sequence derived from alignment at Sc0000271:273527..276104- (Branchiostoma lanceolatum)
GCTAAATTCAAGATGGCGGACACGACCAAGGTGGGTAGTTTTCACGATTT
CTCTGCTGATTTCATCTCAAAATAACTCGAAGAACTTTGATTTATCGGTA
CCAGTGTGTATGAGGAACTCATGGTTCTTGCCATGGCTCAAAAGGTTGGA
TCTACCCACCCGTTTTTCAGAAAAAATGATGTTCCTCTGTTTAGGTCGGT
TCGTCTTGGCAAGAATTTTTATCAATCTCATACCTTGATACTTCACACAG
GAGAGATATATGTCATACGTTGTTTATTTGCGACAGGTTTTTGATACGCA
GGCTGACATCTCGTATTCACCAAACGAATGGGAGCCTACAGTTCCGGGCT
GGTCCAGAAAGCCTGGAATTCAATCCCTCTACACAGACAACCTCCTTCAG
TACAAGGAGCTAGCACCTGACACAAAAATTAAAAAGCACATGGAGTCGTC
TTTTCAGCCCAAAATGTTGGCAAGATTCATCTACAACTCCAACGAGTTTG
AAGATGCAGGGCTTGATGAGATAGAGACACATACTATAGTCCTATCACTC
CACAACACAAGAACTGTTGCTGCAGAACTTGAAGAAAAGGCAAAACATCT
TGGGAATGAGAGAATCCAACACCTGGAGGTGGTTAATCATTACATGGCAA
TAAACCATGCTTTCACAAACTTGCATCATCCATTAACAGTGCGAAAGTTG
TTACAACTTCACAGGACACTCATGAACAGACTTGACACGACAGCGGGACG
GTTACGAACACAGGAGGTGCACTCCAGCAATGGGCACTCCTATCCCAGTG
CATACCTTGTTCCTAAGACTTTGACAACAATTCTGAACCAGTTCAACCAC
CTTTACAGCAGGACAGATATATGCATGTATACTAAAGCAGCATTTCTCAA
GTTCAAGGTTGTGCAGTTACACCCATTCATGGATGGTAACGGACGATTGT
CGCGAATCCTGATGAACTGGGTGCTACATACGGAAGGTTTACCGTTCGCT
GTTTCAATCACCAATGACGGCCACAAGAAGGCAAAGGGTCATTACATGCA
GGCTTTGAAGAGTGCTGACAGGGATAGGGCTAAAGGTCATGTGGCATTTT
TGATTCAATACTGTGCAACAAACTGCTGGAAACTCTTCCATTCAGAGGTA
GAAAAATTTGATGACAGAGCTTGATTGCAAATAACACTAAACACCTGGAA
ACTCTGAAGTAACCCAGAGTTCCGAGGAAATTATGTGAAAACTTTCTACC
TTCCATAGTAGTCCACTGTTTTCTGCTGCTGCAGTAGTCGAAACATCCTT
TCTTCAGTCCTTTCCACTTGGTCCGATTCATCACGAGCTTCCTTAGCAAT
GTGGTATAGATTAAAAGTTGAAAGCTCTCATGATCAGGTAAATAGTCATC
CAGAAATTCTGACTGTATATCGAGCAATGTTTGCATTGGTTTTGTGTTTG
CAGTTTTTGGGGTGAGCTCTCATAGTCATACACGGCAAAATCACACAGCA
AACTTGCTCTGTCTTAATCTTGCATTGTTACAGACCCCCTACACTCTTAT
CGACAAGTGTGTTGGGTTCTTTAACCTGCCCTATGTGTCGCTCAAGACTT
CTGCTTTAGATCCCATTCAATTTCAAGAGGTCCTGCCAAGCCAAAGCTAC
ATGAAGGTACCGATAGGGATAGTACTCATTTTCACCCAAGTCAAGTAACA
AAAGCCAATTGTGAAGTGCCTTTCCCAAGTTTTCAACATATTGTGGCCAG
CTAGAGTCAATCCTAGAATGTCTAGATCCTAAGTCAACTGCCATGGCTAC
AAGATCACAAAACACCACCCCTTGAAGTGTGCTTAATATTGGCCTGGCAT
TGAAATTGGAGTTTAATTTTGTTGCACTGGGATGAATATGATGACATCTG
CTTGGAGATTAAAGTATACTGTCTTTGCTCCCTTTTGATATTTGTTGATT
TTGAATTTTACATGCCTGGCTAATATGAAAGCCATGAGGGGCATAAAAAA
TTAGGTTTACTTAGATGTTCTGGTAAATAATAGATACTCAGTTCATTGCT
TCTTATATGCAAGAACACTGACTATAGTGACACAACAGATTGATTGTGCA
TTTTTATTTTTTGCAGAACATGACAGTAGAAATGTAATATAAGTATTCAG
TGTGCATAGTGCAATGTTTCATTTAATATACAATACACACCTCATAAACA
AACATGCAACTTTGATATTTGTCATTATGATACCTGCTTATCTGTTATGA
AAGATGCCTAAGGATGTTTAATAGTTTTAGGCCACATGAATTTATTTTCG
CGGTTCTCTGGCGTTTTTGCCAAAGATTTAGCAAGAGGTTATATTGATAT
AGATAGGAAAGCAGAGGACCTGGAGGAACATTGCACTTGACTCTGATCTT
CTCGATACCTTAGATTGTAAAAATGGCATAGCATAGCGTTGTAAGGTCTT
AAATGTCAACTTTCACAAGTGTTTTTAAAGGACACCGAATGTCTAGATGA
ACAATTTGGTTTAGGCAATTAGTCAAGGCTTGCTTTCGTCATCGTCTATT
TTATAAAATGCTTCGTGTCTGATACATC Coding sequence (CDS) from alignment at Sc0000271:273527..276104- >transcript:BL75895_cuf0 ID=transcript:BL75895_cuf0|Name=transcript:BL75895_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1836bp|location=Sequence derived from alignment at Sc0000271:273527..276104- (Branchiostoma lanceolatum)
GCTAAATTCAAGATGGCGGACACGACCAAGGTTTTTGATACGCAGGCTGA
CATCTCGTATTCACCAAACGAATGGGAGCCTACAGTTCCGGGCTGGTCCA
GAAAGCCTGGAATTCAATCCCTCTACACAGACAACCTCCTTCAGTACAAG
GAGCTAGCACCTGACACAAAAATTAAAAAGCACATGGAGTCGTCTTTTCA
GCCCAAAATGTTGGCAAGATTCATCTACAACTCCAACGAGTTTGAAGATG
CAGGGCTTGATGAGATAGAGACACATACTATAGTCCTATCACTCCACAAC
ACAAGAACTGTTGCTGCAGAACTTGAAGAAAAGGCAAAACATCTTGGGAA
TGAGAGAATCCAACACCTGGAGGTGGTTAATCATTACATGGCAATAAACC
ATGCTTTCACAAACTTGCATCATCCATTAACAGTGCGAAAGTTGTTACAA
CTTCACAGGACACTCATGAACAGACTTGACACGACAGCGGGACGGTTACG
AACACAGGAGGTGCACTCCAGCAATGGGCACTCCTATCCCAGTGCATACC
TTGTTCCTAAGACTTTGACAACAATTCTGAACCAGTTCAACCACCTTTAC
AGCAGGACAGATATATGCATGTATACTAAAGCAGCATTTCTCAAGTTCAA
GGTTGTGCAGTTACACCCATTCATGGATGGTAACGGACGATTGTCGCGAA
TCCTGATGAACTGGGTGCTACATACGGAAGGTTTACCGTTCGCTGTTTCA
ATCACCAATGACGGCCACAAGAAGGCAAAGGGTCATTACATGCAGGCTTT
GAAGAGTGCTGACAGGGATAGGGCTAAAGGTCATGTGGCATTTTTGATTC
AATACTGTGCAACAAACTGCTGGAAACTCTTCCATTCAGAGGTAGAAAAA
TTTGATGACAGAGCTTGAGCTAAATTCAAGATGGCGGACACGACCAAGGT
TTTTGATACGCAGGCTGACATCTCGTATTCACCAAACGAATGGGAGCCTA
CAGTTCCGGGCTGGTCCAGAAAGCCTGGAATTCAATCCCTCTACACAGAC
AACCTCCTTCAGTACAAGGAGCTAGCACCTGACACAAAAATTAAAAAGCA
CATGGAGTCGTCTTTTCAGCCCAAAATGTTGGCAAGATTCATCTACAACT
CCAACGAGTTTGAAGATGCAGGGCTTGATGAGATAGAGACACATACTATA
GTCCTATCACTCCACAACACAAGAACTGTTGCTGCAGAACTTGAAGAAAA
GGCAAAACATCTTGGGAATGAGAGAATCCAACACCTGGAGGTGGTTAATC
ATTACATGGCAATAAACCATGCTTTCACAAACTTGCATCATCCATTAACA
GTGCGAAAGTTGTTACAACTTCACAGGACACTCATGAACAGACTTGACAC
GACAGCGGGACGGTTACGAACACAGGAGGTGCACTCCAGCAATGGGCACT
CCTATCCCAGTGCATACCTTGTTCCTAAGACTTTGACAACAATTCTGAAC
CAGTTCAACCACCTTTACAGCAGGACAGATATATGCATGTATACTAAAGC
AGCATTTCTCAAGTTCAAGGTTGTGCAGTTACACCCATTCATGGATGGTA
ACGGACGATTGTCGCGAATCCTGATGAACTGGGTGCTACATACGGAAGGT
TTACCGTTCGCTGTTTCAATCACCAATGACGGCCACAAGAAGGCAAAGGG
TCATTACATGCAGGCTTTGAAGAGTGCTGACAGGGATAGGGCTAAAGGTC
ATGTGGCATTTTTGATTCAATACTGTGCAACAAACTGCTGGAAACTCTTC
CATTCAGAGGTAGAAAAATTTGATGACAGAGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000271 | genome | Sc0000271:273527..276104 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75895_cuf0 |
| Biotype | protein_coding |
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