transcript:BL75882_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL75882_cuf0
Unique Nametranscript:BL75882_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL75882_cuf0

>transcript:BL75882_cuf0-protein ID=transcript:BL75882_cuf0-protein|Name=transcript:BL75882_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=136bp
YRTNYKSNLTVHMRKHTGERPYKCDQCDYSAAKKVKLDQHMTEHTGEKPY
MCGKCGYRTAYSISLSEHMRKHTGERPYKCNQCDYSSAQKCNLDRHMAQH
TGDKPYMCVECEYRTADRSNLSAHMKRKHTDENPYN
Run BLAST on NCBI

mRNA from alignment at xfSc0029456:1..613+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL75882_cuf0 ID=transcript:BL75882_cuf0|Name=transcript:BL75882_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=613bp|location=Sequence derived from alignment at xfSc0029456:1..613+ (Branchiostoma lanceolatum)
TACAGGACGAATTACAAGTCTAACCTAACTGTACATATGAGAAAGCATAC
AGGTGAGAGACCGTACAAGTGTGACCAGTGCGACTATTCTGCTGCAAAGA
AAGTCAAATTGGACCAACACATGACTGAGCACACAGGCGAAAAACCATAC
ATGTGTGGGAAGTGTGGTTACAGAACGGCTTACAGCATTTCCCTATCCGA
ACACATGAGAAAGCATACAGGTGAGAGACCGTACAAGTGCAACCAGTGCG
ACTATTCTTCTGCACAGAAATGCAACTTGGACCGACACATGGCTCAGCAC
ACTGGAGACAAACCCTACATGTGTGTGGAGTGCGAGTACAGGACGGCTGA
CAGGTCTAACCTATCTGCACATATGAAGAGAAAACATACAGATGAAAACC
CTTACAACTGACCACTGATGATATCCAGCAGCAGAGAAAGTTCTTGGAAA
ATACCGTTGATACCTTATCACATGACCTACTAGCGATTGTTCTAGGACAG
ATCACAAATGCAGAATTTGTCCAAGTAGAATCGCCGTTTGTCCTAGGATT
GTAAACTTTACGATATAGAAAGAAATGTTCTTTTCAAATGTATTAATGAG
AAATTCCCATACT

Coding sequence (CDS) from alignment at xfSc0029456:1..613+

>transcript:BL75882_cuf0 ID=transcript:BL75882_cuf0|Name=transcript:BL75882_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at xfSc0029456:1..613+ (Branchiostoma lanceolatum)
TACAGGACGAATTACAAGTCTAACCTAACTGTACATATGAGAAAGCATAC
AGGTGAGAGACCGTACAAGTGTGACCAGTGCGACTATTCTGCTGCAAAGA
AAGTCAAATTGGACCAACACATGACTGAGCACACAGGCGAAAAACCATAC
ATGTGTGGGAAGTGTGGTTACAGAACGGCTTACAGCATTTCCCTATCCGA
ACACATGAGAAAGCATACAGGTGAGAGACCGTACAAGTGCAACCAGTGCG
ACTATTCTTCTGCACAGAAATGCAACTTGGACCGACACATGGCTCAGCAC
ACTGGAGACAAACCCTACATGTGTGTGGAGTGCGAGTACAGGACGGCTGA
CAGGTCTAACCTATCTGCACATATGAAGAGAAAACATACAGATGAAAACC
CTTACAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL75882gene:BL75882Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL75882_cuf0-E1BL75882_cuf0-E1-1564476830-547806Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL75882_cuf0transcript:BL75882_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0029456genomexfSc0029456:1..613 +
Properties
Property NameValue
Transcript idBL75882_cuf0
Biotypeprotein_coding