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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75204_cuf0 >transcript:BL75204_cuf0-protein ID=transcript:BL75204_cuf0-protein|Name=transcript:BL75204_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=445bp
MTTFWHLYRVLLGQWSTRAKTFLWTVLLSVIFVYLLRREPARTTEDVDIS
WAETEKCPACVGDTCELLHRGDFVKVESDRYLKKGIVSAGKVGGVAVIAK
TLNNVEAWQRYEKFICRSSPHPEVCNASSFILETMLVTEAAFTLPWLREA
WRITQEQKTALSHCGSTRFLQELKRLYVGNKITDLTKRLAYLSTSLLLNE
ESVLLKYFTTKSSTPWPFPKFYGACGRVIVVEHAGRTLDNFVESPWAVRA
DIALQLLQLVDTLRERDPDWILLLTDISFENFAVDHRGRVRLIDLDDVMV
FDRRAVDSHQQGRKVICNEKCYMDWQKTIFNDSYHCKDVHKYTEMMYASI
CARLLSNLLKHPDRHDWGDRGDIKVKLEIPGKGLLHGAPGDISGSLEGAL
AQCVEETRPGWRLVAVKTLKXTRPGWRLVAVKTLKKTLKRTNNEL Run BLAST on NCBI mRNA from alignment at Sc0000007:4142309..4144230+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75204_cuf0 ID=transcript:BL75204_cuf0|Name=transcript:BL75204_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1922bp|location=Sequence derived from alignment at Sc0000007:4142309..4144230+ (Branchiostoma lanceolatum)
CTGGTTGTCTTGCCGATCGGCCGACAACTCAAAGACAACTACATCCGTCA
CATATATATATACTGATTACATGATCAACAGGCTCTCATTTCCCTTCACA
CTACCATTCCTGTGTTTCTTCAATTCAAGTACTAGTCCCGAGAAGAAAAA
GATCCTGGCAGAGGCAAAGAAAGGGTGTCTATCATGACTACATTCTGGCA
CTTATACCGCGTTCTACTGGGCCAATGGTCAACAAGAGCGAAGACGTTCC
TATGGACAGTGTTACTGTCGGTTATTTTTGTCTACCTACTTCGGAGGGAA
CCTGCTAGGACGACAGAAGACGTCGATATTTCCTGGGCCGAGACGGAAAA
ATGTCCAGCGTGCGTTGGAGACACCTGCGAACTTTTACATCGGGGTGACT
TCGTGAAAGTAGAGTCGGACAGGTATTTAAAGAAAGGTATCGTCTCCGCT
GGAAAGGTTGGTGGTGTTGCGGTGATCGCGAAAACCCTGAACAACGTAGA
AGCGTGGCAAAGATATGAAAAGTTCATTTGCCGCTCGTCGCCACACCCTG
AAGTATGTAACGCTTCGTCTTTCATTCTTGAGACCATGTTGGTAACCGAG
GCGGCATTCACGCTCCCATGGCTACGAGAAGCATGGAGAATCACCCAAGA
ACAGAAGACAGCCTTGTCACATTGTGGATCGACTAGGTTTCTACAAGAAC
TGAAACGACTGTATGTTGGAAACAAAATCACGGACCTCACAAAAAGACTC
GCGTATCTTTCAACGTCACTTCTCCTAAACGAGGAGTCGGTCTTACTCAA
ATATTTTACTACAAAGTCGTCAACGCCTTGGCCCTTTCCCAAGTTCTATG
GAGCTTGTGGGAGAGTGATAGTGGTCGAACATGCAGGGAGGACGCTAGAC
AATTTCGTGGAGTCCCCCTGGGCAGTTCGAGCCGACATCGCACTACAGTT
GCTACAACTAGTCGACACTCTACGCGAAAGGGACCCGGATTGGATACTCT
TGTTAACGGACATATCTTTCGAAAACTTTGCAGTCGACCATCGCGGACGG
GTTCGATTAATCGACTTGGACGATGTGATGGTATTCGATCGAAGAGCTGT
TGACAGTCACCAGCAAGGTCGGAAGGTGATATGTAACGAGAAGTGTTATA
TGGACTGGCAGAAGACAATATTCAACGACTCGTATCACTGTAAAGACGTG
CATAAGTACACTGAAATGATGTATGCCAGCATTTGTGCTAGACTTTTATC
GAACCTTCTAAAACATCCTGATCGACACGATTGGGGAGACAGAGGTGACA
TCAAGGTCAAACTGGAGATCCCGGGCAAAGGCCTTCTACACGGAGCTCCT
GGTGACATCAGTGGGTCGCTAGAGGGCGCACTTGCACAGTGTGTTGAGGA
GACTCGGCCTGGGTGGCGACTGGTTGCAGTAAAGACGCTAAAGANGACTC
GGCCGGGGTGGCGACTGGTTGCAGTAAAGACGCTAAAGAAAACTTTGAAA
AGGACTAATAATGAACTATAACATCTGTTGTTAGTATATTGTGCTCAATG
GATAACAGAAATCCACTGCTTTTTAAATGTGTTTTCCTAGCTCTTCTGCT
ATGTGTATAGCTTGATATGTATATTACAAGGGAAGCTTGGACGAATATCT
AATAATTTTTCCTTCGATGCTTTTTTACCACATAACGTTACATGAGTATT
AACATTATAGCGATTCTTCCTTCTGGTGTGACGGGTTATGTATTCTGGGT
CACAAAGCTTTTGACTTTTTTGTTCATTAACGAAATATTGACATATGTAT
TAGTATGTATATAACTCCTTATTGTGTCTTCTACCAATATTGCGTAGCTT
AGAATTTACGTGTAGATTGTAGAATTGTTGTGAAATAAACTTTGACTTGT
ATTGGAGGTGACCGTGCTTGGC Coding sequence (CDS) from alignment at Sc0000007:4142309..4144230+ >transcript:BL75204_cuf0 ID=transcript:BL75204_cuf0|Name=transcript:BL75204_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1338bp|location=Sequence derived from alignment at Sc0000007:4142309..4144230+ (Branchiostoma lanceolatum)
ATGACTACATTCTGGCACTTATACCGCGTTCTACTGGGCCAATGGTCAAC
AAGAGCGAAGACGTTCCTATGGACAGTGTTACTGTCGGTTATTTTTGTCT
ACCTACTTCGGAGGGAACCTGCTAGGACGACAGAAGACGTCGATATTTCC
TGGGCCGAGACGGAAAAATGTCCAGCGTGCGTTGGAGACACCTGCGAACT
TTTACATCGGGGTGACTTCGTGAAAGTAGAGTCGGACAGGTATTTAAAGA
AAGGTATCGTCTCCGCTGGAAAGGTTGGTGGTGTTGCGGTGATCGCGAAA
ACCCTGAACAACGTAGAAGCGTGGCAAAGATATGAAAAGTTCATTTGCCG
CTCGTCGCCACACCCTGAAGTATGTAACGCTTCGTCTTTCATTCTTGAGA
CCATGTTGGTAACCGAGGCGGCATTCACGCTCCCATGGCTACGAGAAGCA
TGGAGAATCACCCAAGAACAGAAGACAGCCTTGTCACATTGTGGATCGAC
TAGGTTTCTACAAGAACTGAAACGACTGTATGTTGGAAACAAAATCACGG
ACCTCACAAAAAGACTCGCGTATCTTTCAACGTCACTTCTCCTAAACGAG
GAGTCGGTCTTACTCAAATATTTTACTACAAAGTCGTCAACGCCTTGGCC
CTTTCCCAAGTTCTATGGAGCTTGTGGGAGAGTGATAGTGGTCGAACATG
CAGGGAGGACGCTAGACAATTTCGTGGAGTCCCCCTGGGCAGTTCGAGCC
GACATCGCACTACAGTTGCTACAACTAGTCGACACTCTACGCGAAAGGGA
CCCGGATTGGATACTCTTGTTAACGGACATATCTTTCGAAAACTTTGCAG
TCGACCATCGCGGACGGGTTCGATTAATCGACTTGGACGATGTGATGGTA
TTCGATCGAAGAGCTGTTGACAGTCACCAGCAAGGTCGGAAGGTGATATG
TAACGAGAAGTGTTATATGGACTGGCAGAAGACAATATTCAACGACTCGT
ATCACTGTAAAGACGTGCATAAGTACACTGAAATGATGTATGCCAGCATT
TGTGCTAGACTTTTATCGAACCTTCTAAAACATCCTGATCGACACGATTG
GGGAGACAGAGGTGACATCAAGGTCAAACTGGAGATCCCGGGCAAAGGCC
TTCTACACGGAGCTCCTGGTGACATCAGTGGGTCGCTAGAGGGCGCACTT
GCACAGTGTGTTGAGGAGACTCGGCCTGGGTGGCGACTGGTTGCAGTAAA
GACGCTAAAGANGACTCGGCCGGGGTGGCGACTGGTTGCAGTAAAGACGC
TAAAGAAAACTTTGAAAAGGACTAATAATGAACTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:4142309..4144230 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75204_cuf0 |
| Biotype | protein_coding |
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