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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75176_cuf0 >transcript:BL75176_cuf0-protein ID=transcript:BL75176_cuf0-protein|Name=transcript:BL75176_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=251bp
MLMRDEAKATADASSLPSDRAVYKKLRNHAVKLNRKKKDLYFKTKITENA
GNHKQMWNSINTLLDRRKTHSPSCVEIDGKFVTKPFDIANYFNNYYIDKI
KAHRTETDTELSTPTVTDLIDQHIMHDKECHLNFHTVSRDAIMKLLTNIP
MSATCGVDQMENKLMRLSSLHIAAPVCHIVNQSLITGCFPSQWKAAKVRP
LPKNSRMTLTGKNSRLISLLPVLSKVLERVVRDQILQYVTINSIISTAQH
A Run BLAST on NCBI mRNA from alignment at xpSc0040090:4715..6062- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75176_cuf0 ID=transcript:BL75176_cuf0|Name=transcript:BL75176_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1348bp|location=Sequence derived from alignment at xpSc0040090:4715..6062- (Branchiostoma lanceolatum)
CCATACGTCACCAAACAAGATGGCTGCTGTCATGGGGAGTTCTCTGCAGT
GAGGATAGAACTCCATCACAATCCTCCTCCAGAGTAGCCCTTACAGGTCT
GCACTCTTGTCAGTTGATATTTTAGATAGGGTTTCAAGTTTTCTTATGTT
TATTGTGTTGATTTTGTTTTGTTAGATAGCCATATTTCCAACGTCAGTCT
CTGCCCCTCCCACCGACATCCATGCCGGATGGATAGTGGCGATTACGCTC
TTTATTCTTTGAGTTTATCAACTTTTTCTTCATTTTCTGGAAAACCTGCA
ACTTGAAGTCAACATATGATCAGACAAATAGAATTGCTGGCTTGCACAGT
TCAATAGAGCATCGAATAAGTGTGCTTAATACACCCCCTCCCACCTCAAG
GATGTGGCTTCTCATCAGTCTGTTTATCGTCAGTTCAGTCTACACATCTT
CTTTCATCTGTGAACCGTTGAACAACATGACCTCGCCCAGACTCATGCAG
AACAAAAAGGGCCTAAATCTAGCCCATGTAAACGGGTGCAGCCTGAGNTC
CGGTCTAATCAGGTTCCGTGGTTAGATGCAGAGCTGAAAGAAATCATGTT
AATGCGAGATGAAGCAAAAGCTACTGCAGATGCTTCTTCATTACCATCAG
ATAGAGCTGTGTACAAAAAACTACGGAACCATGCAGTGAAGTTGAACAGG
AAAAAGAAAGACCTTTATTTCAAGACTAAGATAACGGAGAATGCTGGTAA
TCATAAACAGATGTGGAATTCGATTAACACATTACTCGACCGCAGGAAAA
CCCACTCCCCATCTTGTGTGGAAATTGATGGCAAGTTCGTTACTAAACCA
TTCGACATTGCTAACTACTTTAACAACTATTACATAGATAAGATCAAAGC
CCACAGAACAGAAACAGATACAGAGCTTTCAACTCCTACTGTAACGGATC
TGATAGATCAACATATTATGCATGACAAGGAATGCCATCTGAATTTTCAC
ACTGTTAGTAGGGATGCCATCATGAAGCTGTTGACCAACATTCCCATGTC
AGCAACATGCGGTGTGGACCAAATGGAAAACAAACTAATGAGATTGTCCT
CTTTGCATATTGCTGCACCTGTTTGCCATATTGTCAATCAGTCATTAATC
ACCGGCTGTTTCCCCAGTCAATGGAAGGCAGCAAAAGTACGCCCCTTACC
AAAAAACTCAAGAATGACGCTTACTGGAAAAAACAGCCGGCTAATTAGTC
TCCTTCCAGTGTTAAGCAAAGTGTTAGAAAGAGTGGTTCGTGATCAGATT
TTGCAATATGTAACCATTAACAGCATTATATCAACTGCACAACATGCC Coding sequence (CDS) from alignment at xpSc0040090:4715..6062- >transcript:BL75176_cuf0 ID=transcript:BL75176_cuf0|Name=transcript:BL75176_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=753bp|location=Sequence derived from alignment at xpSc0040090:4715..6062- (Branchiostoma lanceolatum)
ATGTTAATGCGAGATGAAGCAAAAGCTACTGCAGATGCTTCTTCATTACC
ATCAGATAGAGCTGTGTACAAAAAACTACGGAACCATGCAGTGAAGTTGA
ACAGGAAAAAGAAAGACCTTTATTTCAAGACTAAGATAACGGAGAATGCT
GGTAATCATAAACAGATGTGGAATTCGATTAACACATTACTCGACCGCAG
GAAAACCCACTCCCCATCTTGTGTGGAAATTGATGGCAAGTTCGTTACTA
AACCATTCGACATTGCTAACTACTTTAACAACTATTACATAGATAAGATC
AAAGCCCACAGAACAGAAACAGATACAGAGCTTTCAACTCCTACTGTAAC
GGATCTGATAGATCAACATATTATGCATGACAAGGAATGCCATCTGAATT
TTCACACTGTTAGTAGGGATGCCATCATGAAGCTGTTGACCAACATTCCC
ATGTCAGCAACATGCGGTGTGGACCAAATGGAAAACAAACTAATGAGATT
GTCCTCTTTGCATATTGCTGCACCTGTTTGCCATATTGTCAATCAGTCAT
TAATCACCGGCTGTTTCCCCAGTCAATGGAAGGCAGCAAAAGTACGCCCC
TTACCAAAAAACTCAAGAATGACGCTTACTGGAAAAAACAGCCGGCTAAT
TAGTCTCCTTCCAGTGTTAAGCAAAGTGTTAGAAAGAGTGGTTCGTGATC
AGATTTTGCAATATGTAACCATTAACAGCATTATATCAACTGCACAACAT
GCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0040090 | genome | xpSc0040090:4715..6062 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75176_cuf0 |
| Biotype | protein_coding |
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