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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75161_cuf0 >transcript:BL75161_cuf0-protein ID=transcript:BL75161_cuf0-protein|Name=transcript:BL75161_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=469bp
SSVITKTLNWAGQHLSDPLSIANCFNNFFVTVGRKLAERFKQQTLTLQCP
TVYRQISSTFQFKQVNDHSVYNKLSTLSNNKATGLDRIHSRLLKAAAPCI
CKPVAHIFNMSLSSGHIPKEWKRARVTPIHKGGDQDDPNNYRPISVLPVI
MKAFEKEVHGQFLEYLHKHQILATQQSGFRPGHSTATTLLDATDYMLHNI
SNGKLVGAVFLDLKKAFDTVDQNVLLQKLSWVGVQGVELHWFTDYLAGRE
QTVSLNGCESDFLPVTLGVPQGSILPPLLFILYINDLSSSVSTVCKVCLY
ADDTAIFCSSKDARVIENTLNSELANLATWLHSNRLTLNVAKTKWILFGG
SGKLRAVPPLRIQIDQETVEQVYQFKYLGVLLDCNISWNEHIDMVCSKVS
QRIGLLRRLRSCLTVNIASMLYRSMILPLLEYCDIVWENCNITKQRQLQV
LQNRAARVILQMKRRSSVQ Run BLAST on NCBI mRNA from alignment at Sc0000256:346710..348117+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75161_cuf0 ID=transcript:BL75161_cuf0|Name=transcript:BL75161_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1408bp|location=Sequence derived from alignment at Sc0000256:346710..348117+ (Branchiostoma lanceolatum)
GAGCTCTGTTATCACAAAGACTCTCAACTGGGCAGGACAACATCTCTCAG
ATCCACTCAGCATAGCAAACTGTTTTAACAACTTCTTTGTTACAGTTGGC
AGGAAACTTGCAGAGAGGTTCAAACAACAGACACTGACCCTACAGTGCCC
CACAGTGTACAGACAGATCTCATCCACCTTTCAATTCAAACAGGTTAATG
ATCACTCTGTGTATAATAAACTCAGTACATTGAGCAACAACAAGGCAACA
GGTCTTGATCGTATTCATTCAAGACTGTTGAAAGCTGCAGCTCCATGTAT
CTGTAAACCTGTCGCTCACATATTTAACATGTCCCTCTCCTCAGGTCACA
TTCCAAAAGAATGGAAAAGGGCCAGGGTTACACCTATACACAAAGGGGGG
GATCAAGATGACCCAAACAACTACAGACCCATTTCAGTGCTACCAGTAAT
TATGAAAGCATTTGAAAAGGAAGTACATGGGCAGTTCTTAGAATATCTGC
ATAAACACCAGATTCTTGCTACCCAACAGTCAGGTTTCAGACCTGGACAT
TCTACAGCCACAACCCTTCTTGATGCCACAGACTACATGTTACACAACAT
ATCTAATGGTAAACTTGTGGGAGCAGTCTTCTTAGATCTTAAAAAGGCAT
TCGACACTGTGGATCAGAATGTCTTACTACAGAAGCTGTCTTGGGTAGGT
GTACAGGGGGTTGAGCTTCATTGGTTCACTGATTACTTAGCTGGAAGGGA
ACAAACTGTTAGTCTCAATGGATGTGAATCCGACTTCCTACCAGTTACAT
TGGGGGTACCCCAGGGCTCTATTCTTCCCCCCCTACTGTTCATTCTGTAC
ATAAACGATTTATCTTCATCAGTCTCTACTGTATGTAAAGTATGTCTGTA
TGCAGATGATACTGCTATTTTCTGTTCCAGCAAGGACGCTAGAGTCATAG
AGAACACCTTAAACTCCGAGCTAGCAAACCTTGCCACATGGCTACATTCA
AATCGTCTAACACTGAATGTCGCTAAGACTAAGTGGATTCTATTCGGTGG
TAGTGGGAAGCTAAGAGCAGTACCTCCACTTAGAATCCAGATTGATCAGG
AAACAGTCGAACAAGTGTACCAATTCAAATACCTAGGTGTTCTCCTTGAC
TGCAATATCTCATGGAACGAACACATTGATATGGTATGTTCCAAGGTATC
TCAGAGAATAGGTTTGCTAAGACGCTTAAGATCATGTCTCACTGTCAACA
TTGCAAGTATGTTATACAGAAGTATGATTCTACCACTACTGGAGTATTGT
GACATTGTCTGGGAAAATTGTAACATCACCAAGCAGCGACAACTTCAGGT
CCTTCAAAATCGAGCTGCCAGGGTCATCCTACAAATGAAGCGACGATCAA
GTGTCCAA Coding sequence (CDS) from alignment at Sc0000256:346710..348117+ >transcript:BL75161_cuf0 ID=transcript:BL75161_cuf0|Name=transcript:BL75161_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1407bp|location=Sequence derived from alignment at Sc0000256:346710..348117+ (Branchiostoma lanceolatum)
AGCTCTGTTATCACAAAGACTCTCAACTGGGCAGGACAACATCTCTCAGA
TCCACTCAGCATAGCAAACTGTTTTAACAACTTCTTTGTTACAGTTGGCA
GGAAACTTGCAGAGAGGTTCAAACAACAGACACTGACCCTACAGTGCCCC
ACAGTGTACAGACAGATCTCATCCACCTTTCAATTCAAACAGGTTAATGA
TCACTCTGTGTATAATAAACTCAGTACATTGAGCAACAACAAGGCAACAG
GTCTTGATCGTATTCATTCAAGACTGTTGAAAGCTGCAGCTCCATGTATC
TGTAAACCTGTCGCTCACATATTTAACATGTCCCTCTCCTCAGGTCACAT
TCCAAAAGAATGGAAAAGGGCCAGGGTTACACCTATACACAAAGGGGGGG
ATCAAGATGACCCAAACAACTACAGACCCATTTCAGTGCTACCAGTAATT
ATGAAAGCATTTGAAAAGGAAGTACATGGGCAGTTCTTAGAATATCTGCA
TAAACACCAGATTCTTGCTACCCAACAGTCAGGTTTCAGACCTGGACATT
CTACAGCCACAACCCTTCTTGATGCCACAGACTACATGTTACACAACATA
TCTAATGGTAAACTTGTGGGAGCAGTCTTCTTAGATCTTAAAAAGGCATT
CGACACTGTGGATCAGAATGTCTTACTACAGAAGCTGTCTTGGGTAGGTG
TACAGGGGGTTGAGCTTCATTGGTTCACTGATTACTTAGCTGGAAGGGAA
CAAACTGTTAGTCTCAATGGATGTGAATCCGACTTCCTACCAGTTACATT
GGGGGTACCCCAGGGCTCTATTCTTCCCCCCCTACTGTTCATTCTGTACA
TAAACGATTTATCTTCATCAGTCTCTACTGTATGTAAAGTATGTCTGTAT
GCAGATGATACTGCTATTTTCTGTTCCAGCAAGGACGCTAGAGTCATAGA
GAACACCTTAAACTCCGAGCTAGCAAACCTTGCCACATGGCTACATTCAA
ATCGTCTAACACTGAATGTCGCTAAGACTAAGTGGATTCTATTCGGTGGT
AGTGGGAAGCTAAGAGCAGTACCTCCACTTAGAATCCAGATTGATCAGGA
AACAGTCGAACAAGTGTACCAATTCAAATACCTAGGTGTTCTCCTTGACT
GCAATATCTCATGGAACGAACACATTGATATGGTATGTTCCAAGGTATCT
CAGAGAATAGGTTTGCTAAGACGCTTAAGATCATGTCTCACTGTCAACAT
TGCAAGTATGTTATACAGAAGTATGATTCTACCACTACTGGAGTATTGTG
ACATTGTCTGGGAAAATTGTAACATCACCAAGCAGCGACAACTTCAGGTC
CTTCAAAATCGAGCTGCCAGGGTCATCCTACAAATGAAGCGACGATCAAG
TGTCCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000256 | genome | Sc0000256:346710..348117 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75161_cuf0 |
| Biotype | protein_coding |
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