transcript:BL75150_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL75150_cuf0
Unique Nametranscript:BL75150_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL75150_cuf0

>transcript:BL75150_cuf0-protein ID=transcript:BL75150_cuf0-protein|Name=transcript:BL75150_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
SSRATVHATTSNIGYADDIGLSRTLTCDTVESDTTMQEEATQLDTWADKN
NMIMNGDKSYELRMCFSKNPPAPPPLILGGKEVPVVECATYLGFILHRSL
GWDSQITHMAKKGSTRLHFLRMLKKGGMPPEDLETVYTTLIRPVLEYANV
VYVGCNTKQNNTLEAVQRRAMKIIYSNSIQTTPLPTLKDRRESA
Run BLAST on NCBI

mRNA from alignment at Sc0000041:230654..231237+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL75150_cuf0 ID=transcript:BL75150_cuf0|Name=transcript:BL75150_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=584bp|location=Sequence derived from alignment at Sc0000041:230654..231237+ (Branchiostoma lanceolatum)
GTCGTCTAGAGCAACTGTACATGCGACAACAAGCAACATCGGTTATGCAG
ATGACATCGGACTGTCTAGAACGCTTACATGTGACACTGTTGAAAGCGAC
ACAACCATGCAAGAAGAAGCCACGCAACTAGACACCTGGGCAGACAAGAA
CAACATGATAATGAACGGTGACAAATCTTACGAGCTGAGAATGTGTTTCT
CAAAAAACCCTCCTGCTCCACCTCCGCTCATCCTTGGAGGCAAAGAAGTC
CCGGTTGTTGAGTGTGCCACATACCTGGGTTTCATACTACACCGCAGTCT
TGGTTGGGACAGCCAAATTACTCACATGGCAAAGAAAGGCTCAACTCGTC
TCCACTTTCTCCGCATGCTTAAGAAGGGCGGGATGCCACCGGAGGATCTG
GAAACAGTCTACACTACTCTGATACGGCCAGTGTTAGAATACGCAAATGT
AGTATACGTAGGCTGCAACACAAAGCAGAACAACACTCTTGAAGCAGTAC
AGAGGAGGGCAATGAAGATAATCTACAGCAACAGCATCCAGACAACCCCC
CTCCCCACTCTTAAGGACAGACGGGAGTCAGCAG

Coding sequence (CDS) from alignment at Sc0000041:230654..231237+

>transcript:BL75150_cuf0 ID=transcript:BL75150_cuf0|Name=transcript:BL75150_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at Sc0000041:230654..231237+ (Branchiostoma lanceolatum)
TCGTCTAGAGCAACTGTACATGCGACAACAAGCAACATCGGTTATGCAGA
TGACATCGGACTGTCTAGAACGCTTACATGTGACACTGTTGAAAGCGACA
CAACCATGCAAGAAGAAGCCACGCAACTAGACACCTGGGCAGACAAGAAC
AACATGATAATGAACGGTGACAAATCTTACGAGCTGAGAATGTGTTTCTC
AAAAAACCCTCCTGCTCCACCTCCGCTCATCCTTGGAGGCAAAGAAGTCC
CGGTTGTTGAGTGTGCCACATACCTGGGTTTCATACTACACCGCAGTCTT
GGTTGGGACAGCCAAATTACTCACATGGCAAAGAAAGGCTCAACTCGTCT
CCACTTTCTCCGCATGCTTAAGAAGGGCGGGATGCCACCGGAGGATCTGG
AAACAGTCTACACTACTCTGATACGGCCAGTGTTAGAATACGCAAATGTA
GTATACGTAGGCTGCAACACAAAGCAGAACAACACTCTTGAAGCAGTACA
GAGGAGGGCAATGAAGATAATCTACAGCAACAGCATCCAGACAACCCCCC
TCCCCACTCTTAAGGACAGACGGGAGTCAGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL75150gene:BL75150Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL75150_cuf0-E1BL75150_cuf0-E1-1564476830-205283Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL75150_cuf0transcript:BL75150_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000041genomeSc0000041:230654..231237 +
Properties
Property NameValue
Transcript idBL75150_cuf0
Biotypeprotein_coding