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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75068_cuf3 >transcript:BL75068_cuf3-protein ID=transcript:BL75068_cuf3-protein|Name=transcript:BL75068_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
MAQVFTVTQFVAGIVGTFVGTLLVVGLVFALVYYFRRRRDRRKAMENNMQ
VTIENAHVENPITLNSVSDGYTIENPHAGRRQRTDNGSRSSALPNGSHGG
ANRNIATIS Run BLAST on NCBI mRNA from alignment at Sc0000024:1282757..1286970+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75068_cuf3 ID=transcript:BL75068_cuf3|Name=transcript:BL75068_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=4214bp|location=Sequence derived from alignment at Sc0000024:1282757..1286970+ (Branchiostoma lanceolatum)
GCCTGGTAGAGACTACACCATTATAATTCCATTCCATTTTCCCTTGTCGA
CAACAATTTTCTTCAGCCCTCTTGTAATATACTTTGCAGTGGAAATCTTT
CTAAAAGACATAACTGACTTGCAGCCGGAATTATTGCTTTTACTTCAATA
ATTGTCAACTCACTCCCATCCCAATTCTGATTTTATGTGCCGGTATTTGG
CACTGAGTCAAGGTACTTATACAGGCAGCTATAGACATGTAGTAACTGCT
AATATCTGCAGTATGTGACTGGAATATGAAGGGATGCCAGAGCGAACACC
TAGTGTGCGTTAAGTGGAAGGGATTCTCCTCGCCAAACGTTACCCAGTTA
GCACAGTTCAACGACTCCCATACCCCGGAATGAGGTAAAGGTGTGGCGCT
ACGCCCGACTGCTTCATTCCAATACTCCAGGTGAGGCCTGTTCCTACTTA
GAGATTATGTCTGCCCTTTTCAACACCAAACCCTGCTGCCGACAGGACTA
CATCCCCCTCCTGCTTCCCTATTCATGATATCACAGCGGTGACTGTTGTC
AAACTGCCATTGATGATCCCCGATTTGTCATACTCTGTTATGCAGTGTGT
CTGGGTTCAGCTGGTTAATGGGTTGTCCTGGGTGTATCCTGTGTTGTTGT
CCTGTACTGACTGTCTTGTCTGATCTTCCAGGGCCAGCGGTGCGGAAACG
GCAGATTGCCGCGGAGCCATTTTGGGGGTGAATGCCGGCCATTGCCGACG
ATTGGATTGAACCGGGAATGGATTTTCTGTCCTGAAATTTGCGGCACGCT
GACAGAATTACGGAGACGAATGGATCTGATCGGGATCCCCGCTGTAGCGC
ACCGTTTGTCTTGTTAAGCAGCCCGTGAGAGAGTCGGCCATCAACTGTGT
TTAGCAGCGTGTAAGTCTCTTGGATGTACAGTTGAAGTACCCTCAACAAC
TAGACCTTCCTCTGTTATCTAGTGATTTACCAACCTTGTGGAACTATCCA
CGATACGAGTGTTCAGCATCGTGGAAGTCTCTCGGATGTAAGGTTGGACC
CTCCCAAAAACCGACAACAACCGGATACACAAGTTTCCCACGGTGATTGT
TCAGACCAACCTCAAACTAGACATGTGGCCCAAGTCTTCACCGTTTGTGG
CAGGGATCAGTGTTTAACATCGCAAGTTTCTCGGACGTACATGTAAGGTT
GGACCCTTCCAAAAACCAACAACAACACGAGTTTCCACGGTGGTTTTATT
CAAACCTCAAACATGGCTCAAGTCTTCACAGTCACACAGTTCGTAGCAGG
GATTGTGGGCACGTTCGTGGGCACCCTGCTGGTAGTCGGACTTGTGTTTG
CCCTGGTGTACTACTTTCGGAGGCGGAGGGATCGCAGGAAGGCCATGGAG
AACAACATGCAGGTGACCATCGAGAACGCTCACGTGGAGAACCCCATCAC
TCTGAACAGTGTATCCGACGGATACACCATAGAAAACCCTCACGCGGGGA
GGAGGCAAAGAACTGACAACGGCAGCCGGTCCTCCGCTCTTCCCAACGGA
TCTCACGGGGGTGCAAATAGAAATATTGCCACGATATCATGATGGTGTGT
TTACAGAGAGAGCAAGTCACCAAAGCTGCTAGGTCTTTTACTGTAAATTT
GTTTTTCTTTTGCTGTGGTTTTATTTTGCACTAGGAGGGAAAAGAAGATT
GTCACAGTGCTTGAAAATGTAAATTGATAGTTAAAACAGCTCTGTACAGT
TAGTACTACATTGGAAACGGTGGAGATTTCAATAAGAATACTGCAATAAT
AAAACCACCGCGAAAATGTCAAGATTTACCGTAGTACCATATTGGAAATA
GTGGAGAGGTCACCACAAGAATAAATCCACCGCAAAAGTTACAAGATTTA
CGGTATTCGGACATTTAATAGGACGACAAAAACTTTATCTCTTTGGCTCC
AACACACACAGACTACTCTACAGTATTACCGCCTGAAAGCAACACGGCTA
CATTTTTGTGTATCGCTGCCTTCAAACATCACATGGTTCACATCTCCTAT
CCTCGTGACGGGTCCTTGCAATCGCTAGTACATGGTCGACCTTTCGTGTG
TACTGCGTCAACTATGTAAACAGGACAACACTCCCCCTTTTGTGTGCGAG
ACAACTTGAGAAAGGACTGTATAGAGGAACAACTGTGACAGCTGTATCAA
GGATCATCACATTTCTACACAGGCCCACCACACTGGTGGGATTTCCTAAA
GGAGCATTTTCAGGCCGACATCACATCTATAAAGACTGCCCTTGTTCAGA
CAATTGCTGAACCTACAGCAGTGCACAAGTGGGATTCCTGTCTGCTCCTA
TGGTGAAGTATGGTAAAGCTTGACTTTCAGTCTTCCCATGACCAGGTGCC
CATGACAAGTTGTTTTCCAGTCAGGGCTGTTTCCAGGACCTGTCCTTCCG
TTTCGGGATGGACATTTGCATGTTCGGACAGAAAAAAATTCACCTTGTTC
ATCCAAAAGTTCTGAGCTTCATGGCATGAAACTGATGGAAATGTCTTTTC
ATAAACTTCAAATCAAGACAGCTTTAACGACAAAAACCAACAATATAGGA
CGGAAAAATTTCACCTTGTCCATCCAAAAAAATACTTCATGACATGGAAC
TCGGATGAAAATGTATTTTCATAAGCTTAAGATGACAGATTTAATGACGA
AAATCAACAATATCAGCTCACGAACAGTGAGAGGGACGGATAAAATGTCA
CCTTGTCCATCTCAACTTCACGACATGAAACTGATGAAAACATATTTTCA
AAAGCTTGAAATCATGACAGATTTAGCAATACTGTAACATTCAACTACGT
GGTGGCCCAAAAACAATGAGTGGTACGGAAAAAAGTTAAAGCTGGAGACA
GCCCTGCTTAACATGGATACCATCGATATCGCTTGCTATAAAGATTAATA
TTGAGGCAGCAGTTACTACAGAGGATGGTACCCAGGCTAAGCCCTGCTTA
CTGTATACAACATGTGAATGGTACAGTTTACACTTGTTTCCCTTTTGGTT
ACACACATGTTGTGGGAGGCAGGAAAGGGAATGGAAACATCAGGACAAAT
ATGGGAGAGTTTCTCACATCAAACCTTGAACTGCATCTGGACAGTCAAAA
CATAACCATGCTGTTGGAAACAGCATCAATATACAGTCAAAACTGCCCAA
GAAGACCGCTCAGAGGACTGAAAATATCTGGACTATATGGACAGGGGGTC
ACTAGATCTATAGACAAGATTCTTAATGCTTGTGTCAAAAGTTATCCAAG
GGACCTCAAAAAAGTGGTTACACTGGCCAGGTTATCCTTATGTAGAGGTG
GTCTTTTTACAGGTTTGACTGTAGAATACTAGCCTGAAATTTTATTCTGC
TTTCCCTTCCAACTCTGAGCCACACAAGCCGGGCTTAGTTATATTTTCAA
AATCATACAGTAAGTCCAGCATATCCAGGATATTTATACAGGGGGAGGAG
CCAGCCGATGTACATTTTACTGTCAAGTCATCCTGAAAAAAAGAGCAGTC
CGTAAAAGTGCTTGTATAGTAAACACTTGACTTCCTGTTACATCTGGGTT
TGTGTACAAGGCGGGACTGTAAAATGTTTTACTGTCAATCTTCTAATCTT
TATGAACTGTGTCTTCGATTTTGTTTCGTAACCCTCCTCATAGAAACTTG
TTCTTGTAAATATTCCAGGTGATCTCAAAGGGAAATGTATAGAGGGTTTA
TATATTAAATGTACACATATAAAGTTAGAAGCTGGCTTCAAGTTTTGAGA
CTTTTTCGGTTGATACAGAGAAAAACATTTAATTTTTGTGACAAACCAAC
AAGTCTTCTCTCTATTGGGTGTTGAAATGTGCTCTTCATAAGTGCTCTTC
ATATGGCTTAAGCCAGTTTCTCATGTTAAAATTGTTGGGTCTGGCCTGTG
TTAGTTTTGACAACTTGGTATGTTCCACCCCATGATTTACTAGCCTGTAA
TAAGTACTGTAGATGTGATTTACAATCAGTGACCTGTGGTTCGACGCACC
TTGCCAAGGATGATCTTTGTATAAAATGGTTTCTTTCTATAGTAGCAGGT
GTTGGGGAAGAGTTACTGGTACTGTTATTATTTTTTTCAATAAATCTCGG
GGAAAGGGTGACCAGGTCTTGACTTCTTTTCGTTTATTCCAGTTTTAGTT
GACTATGAGACCAC Coding sequence (CDS) from alignment at Sc0000024:1282757..1286970+ >transcript:BL75068_cuf3 ID=transcript:BL75068_cuf3|Name=transcript:BL75068_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0000024:1282757..1286970+ (Branchiostoma lanceolatum)
ATGGCTCAAGTCTTCACAGTCACACAGTTCGTAGCAGGGATTGTGGGCAC
GTTCGTGGGCACCCTGCTGGTAGTCGGACTTGTGTTTGCCCTGGTGTACT
ACTTTCGGAGGCGGAGGGATCGCAGGAAGGCCATGGAGAACAACATGCAG
GTGACCATCGAGAACGCTCACGTGGAGAACCCCATCACTCTGAACAGTGT
ATCCGACGGATACACCATAGAAAACCCTCACGCGGGGAGGAGGCAAAGAA
CTGACAACGGCAGCCGGTCCTCCGCTCTTCCCAACGGATCTCACGGGGGT
GCAAATAGAAATATTGCCACGATATCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000024 | genome | Sc0000024:1282757..1286970 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75068_cuf3 |
| Biotype | protein_coding |
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