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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75059_cuf1 >transcript:BL75059_cuf1-protein ID=transcript:BL75059_cuf1-protein|Name=transcript:BL75059_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
MCTTRFFGRPQRKSRRSKVTGTEGGPKMPMFGKRTLFQWFRFAWEREPVI
VAAIVVGVLPPFGVLFMPESWREDVMRRQHMVTTRYPVPVRDEGDDTKA Run BLAST on NCBI mRNA from alignment at Sc0000183:579643..585204- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75059_cuf1 ID=transcript:BL75059_cuf1|Name=transcript:BL75059_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=5562bp|location=Sequence derived from alignment at Sc0000183:579643..585204- (Branchiostoma lanceolatum)
AGGGAAATTAAATCATTTCCGTTTTTTAATCAGGATATACCACTAAAAAG
ATATAAACTACCCATAGCCATGAATGTGTACAACTAGATTCTTTGGTCGG
CCACAGAGAAAGAGTCGCAGGTCAAAGGTTACAGGGACTGAAGGAGGACC
GAAGATGCCTATGTTTGGGAAAAGAAGTAAGAAAATTCCTTTACTACGAC
GCGTAGATTATTTTAGCGACATATTTCATGTGCTGGGGTACTTACAGTAG
TTTATGGCGGCTTTTAGAGTTTCAGAAATGTCAGTTTTTTGTCGTAGATC
ATCGTTAAACATTGTCAATTTTTGAAGGACATTATCTGGGGGAGGGGGGC
GGTACAGGGCTGCCATAGTTTTGAAACAATAAAATGTAGCAGAATTTCAA
ATCTGTTGCAGAGGACATGTGATGTACATTTACTTTTGAGATTTATGATA
TGCAATATAAGGTAGTTTAGGGGTGAAAGCAAATCTTATGACACGTTTGT
ATATCCAAACTTGGATATGAAATCAAAATGACAGCTGAAATTATTTCGTA
AAATTTTCAGATTTCATTTCATATCCAGATTCAAATTAAACTTGATTATA
TTCACCTTGAATATTCACCTTGAAGTTCAGCCAGTAGGTACCCATTAAGA
GTAATGAGGCTGTGCCTAGTTGGTGCTAGTAGTGCGCATGATACTAGTAG
TTTCTTTTGTTCGCTTCTTTTTTCTTCCTTCCTTCCTTCCTTCCTTCTTC
TTATGAAATGTAATCTGAAATTAAATCTTTGAAATCCTTCAAATTGTATT
TCATATGCAGGCCTCGAAATACTGGGTACATGTGCACCTGTGTGCACCCA
AAATTGGTGCTGTGCACCTAATTTTTGATTATGGGTGCGCTGGTGCTCCT
AGATATTTTCATAAGCTGCTATAGGGTAAAGGTACTATTGTACACTAGTA
TACAGAATATTCTTGAAATGTAAGTATCAGAAAAGGCAATTTAACCTTTT
GTAGTACTTTATATTTGATGTATTATTACTTATTTGAAATTTTGAAGTTA
GCTTTTAAATTACAGATTCGACAAGTTGTGTAATTTTTAAAGAGCATTAA
ACTTTGTACTTTGTAATCATGTTTTGCTGACATTCAACTTCATTTTATGT
GGTGCACCCAAAATGCGTTCTGTGCACCTAATGTTTTTGGTTGGGTGCAC
CAGTGCACCTATATTCCCCAAAATGAATTTCAAGCCCTGATATGTTCAAA
TCCATTTAGTACTATATTATTGCCAGTGTAACAACTAACTGAATATGCCT
TTGCTGTTACAAGCACTCTTCCAGTGGTTTCGATTTGCATGGGAGAGGGA
ACCTGTGATAGTTGCGGCCATTGTGGTTGGAGTACTCCGTAAGTTTGTTT
GTTTTTGTTAATCCATACACTCTTTAAGTTTTATTTAATGCATACCAATA
ATACTGTGTAAATACTGTATACAAATGTAGCTTCAAATCTATGAAAATAA
AGGTGCAAGAAATGTTTTAAGCCCTGTGGCCTGATCTAGAGAATCAAAAG
AATGTGACAGAGCTGGACACTTTAGTGACTCTCAGATGATCAACTTTATT
CATGTATCTACGGAGGGAATATTGAGTAAATGTAAGCATATAGCAGCTAT
CAGTTATCCTCGTTATCACCCTAGTTTTGGAAATGGCCAGATGTTTCAGG
TAGCATCCACTGCCTTTCGTCAGAGACACTGACCAAGATATGTTGATCCG
TAGCACATGGTCTTCCGACCATTTCCAAAGTCATATCCAGTTGCTTGAGT
AACTGTTATTTGCCATATCTTATGACCTGGATGTCTAACCTTCATCAAAA
TGGTTAACGATATCTTATGCTTATTTGGCCGCAGCTCCCTTTGGTGTGCT
CTTCATGCCTGAGAGCTGGAGAGAGGATGTCATGAGAAGACAACACATGG
TCACGACAAGATACCCAGGTATGTGTCTTGCAATGTGCTGTAAACACCTG
TACTAGTAGTAGTACTGCTGATGATATTTTCATAGCTCATATATCCCATA
GATGCGTGACAAGTTGCCTGTACTAAAGCCACTCTCCCTCTCCAAGCTTT
TTTTTATCAAACTCACCATTCATGTCAGATAAATACTATGATAGGATAAA
AGACTGTAGATTTTCTATTGGTCCGCAAAAAATATAATTGTGTCAGTATC
GTTTTGATATAAGCCATTGTTTCATCCACTCATTCTTTCTCAACCTTCAC
CGCATAATGAAATAGTATAATAGACTTATTACATATTTTTTCTCTCCAGT
TCCAGTGAGGGACGAAGGTGATGACACTAAAGCGTAGTGGCGCCCCCTGG
TTGTCAGAAGTTGTACAACACCCGCACTTCACCTGTGACCTTACCATGTG
TTCAACTTTACTCTGTGCTGCCTAACAACAACAACATAATGATGCTGTAT
ATAATACTGTAGACTTGGTAGAAACATTGCAACTCTTTGTTGTTCACTGG
ACTTATTGCTCTGGTTTTTGAGTTTGCCATCCTACTAGAAACTGTCAAAG
TCCATGAGTGGAAATTTGTTGTCCCCTTGAAAGATGTAATAAAGGAAGTA
TAGAAGACTAATGAATGTCCACCGAAGTCATTAATACACACATGTGTTTG
TCTATGGTTGACAAATTGTGTGATTAAGATTGGCCTTGACATGCATTAGT
GTCCACACTTGACATAAAGCTATACCAGGAACACTTTGTTCACAATGAGG
TAAAACCAGAAATGTCGTTACAGAAATAGCAGGACCATATTTTATCTTGA
TGCTGTAAATTTGCATTAGGAAATTGTCAGAATTAAAGAAATGGGAAGCG
ACAGAAGAGAGATATTGGCCTGCTATATATATACATGCTTACCATTGCCC
ACATCTGCAATACTTGAACACTAAACATTGCATGCAGGCTAATCACATAA
TCCTTAGTGGGCCAGACCATTGCTGCAACATGTATGTCATCCCTTCTAAT
CGACCTCTTCAAAACCTGAATCGGCCATGACCCAACTTATCACACTTCTA
TTTAGCCGTGCAAACATGTCCAGACACACATGTACACGCACCTTTCCCAT
TCCTCTCCTTTGCTCATTTTCAATTCCCAAATAATCCAAACCTACCTAGC
ACGNTTCCAAAATAATCCAAACCTACCTAGCACAATATCTCCGTTGTTTG
TTACAGTGGTTTTGTTCCAAGCCATTTTAGTAACCAGATGTATTAAGGAG
ACAATATCATTGTGGAACTCTTTTTCTTTATTTATCTGCTCAACATCATT
GGACCATAGACATGTACTGTACATGTATTTTACATCATCACTATAAAAAT
ACACTATCCACATATTGTTGGTCCACCTCATAAATACACACTAAAATCAC
CACAGTGACTACATATGTGCACCAAATGTCAGGTTTGTGGCCATGTACAT
GAATATTGTATCATGACTTTGGAATGGGATTTCAGGGTGTCAAGAAAGTT
CTTCAATACATATGGTGCTGACAACATACCAATGTCTTATACAATATCAA
AAGCAATGTTACACGTATGAATGTCTTTTATCGATTTGTCTGTAGTCTGA
ATTGAGTACAAGTTACAACTCTGTGGTAAAAACATGAATATATCAACTAT
TTATCATCTTCCATTAATCTGCCAGGTTACATAAATCAGCCACATTGAAA
TACAGTGGATTTGAGGGATCTCTAGTGCAGCACCACGGGTATGCACAGTT
TAGATATACAGGGGTACATAATACTAGCCTGGAGTCCAGCCTTCTTAGCT
TTAGTCCGCTACCCAAGCTCGATCCGCTCCCAGCGGACTTAAGCTAAGAA
GGCTGGACTCCAGGCTAACACTATACTGGCGAACATTGGGTTGGAGATCT
GTTTGGATGTATCTTTTCAATGTGGCGGACTTACGTACCCTGGTGGAATT
TTGTTACTAGATGTTATATGTATGCAGATAGATTTGTCCTCTTGCTGATT
CATCTAGCATGAGCAACGCAATATAACATCAATCCAGACACTTAATGCTA
CATGTAGACATACAAGTACGTAATACATACTGAACCGCTAACCATTCCTC
GTATGACCTTTTAAGTGCACTACACTCAGACATGAAAAAGAGAATTGATG
ACTCTCAGATATCCCTCAGTTCCACCCCACTACTCTTAGACATAGCGGAT
AGTTCCATTTCTACTGCAAGGGTTGGTGTGCATCTATGGGCCATTTCATT
TTATATGGGCCTATGAGAAATTGATTAGAGCAGAAGTCATCAGCAATTTT
TTTTTCTCCTTCAGTTTGTTACTTACATGCCAACCTGAGCATTCATCTGG
TTTCAATCAATCACGAACTTCTCTTGGTAATGCTGTATTTGTACTCCCAT
ACCTTCTTCATGGGACAGCCAAGAATAATGCATTTTGATATGGAGTGCCC
TTCATATTGCTGAGCTGATCTTGAATGCACTCAAGCAGTAAACATGAGAG
ACTGGCTGAGTGGTCATCTATGATGAAATACTATATCTTCCGAAAATAAT
TTCATCAGACATTGGATATTGGAGTTTTCTTTTTACACAAGCAGGCGAGA
CAATACTGCTTGTGTAAAAAGAAAACTCCAACACCCAATACTACATCTTT
CATGCCATAGTTTATTCAACAGGATCTTTGCAGCAGTTGGCCTTGAAATA
GACGTCAGTATCCTTATCAAAAGAGTTGATATATGTGAAGCGCATATCGG
GGCCACCGTACCCATTACACATGAATATATCATATATAGCGCCGTTGTAA
CCAGGCACATTACATACGTACAGTAGGCCAGACGTCATATTTTATCCACT
GGAATGGTGGTTATAACATCATGTCTAGACATTTAGATACTTCTTCATAG
TGAAGATGCTTTACAGTGCTGTCTTCATTTGTACCATTATACAGATAGCA
TCTTAATCATGATTCAAAATCGTCAATATGAAATTTACATTAAGATATAT
GTCATCTACGCTATCGTTGATATTTTAAGGTAGTACAGATTTTTGATAGT
CCAAGGGGTCTTTCTTAATAGTGCTATCCAAGACGTGAACATTTAACCTC
AGAATCGTGTGATCTATTAGCTATAGAACTAACTGACATTGAATATTCAA
TTTCAGTAATACTAACCACGATTCTAACTGGCATCAGATAGTCTCTCTGC
AAGGTTAGAATTTTCAATATGAGATATCAAAACCGTGTACTAAATCAACT
GAGGATGTTTGCATGGCAGCTAGAACGCTGGTGTATTTCGTTTGAAATTT
GGTCCTTGATGAATATCTTTTGCTGTAGTCAGCCTTTTGGCCGTCCCTTC
GCCCGGCCGAAAAGCTGACTACTGCAAGAAACAGACGAGCCTGGAGACAG
ATGTCCATCTTCCTTGCTACTTTGTCCCCCCAACGACCCGGAGGTCAAAG
GACTAGGTAGGTAGGTAGGTAGAATATCTTTACACATATACAATAATACA
TGTAGTTGGATCGTTGCTTGATTATTCTTTAATCAACTTTCACTGAAAAT
CATATTTCTCCC Coding sequence (CDS) from alignment at Sc0000183:579643..585204- >transcript:BL75059_cuf1 ID=transcript:BL75059_cuf1|Name=transcript:BL75059_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1200bp|location=Sequence derived from alignment at Sc0000183:579643..585204- (Branchiostoma lanceolatum)
ATGTGTACAACTAGATTCTTTGGTCGGCCACAGAGAAAGAGTCGCAGGTC
AAAGGTTACAGGGACTGAAGGAGGACCGAAGATGCCTATGTTTGGGAAAA
GAACACTCTTCCAGTGGTTTCGATTTGCATGGGAGAGGGAACCTGTGATA
GTTGCGGCCATTGTGGTTGGAGTACTCCCTCCCTTTGGTGTGCTCTTCAT
GCCTGAGAGCTGGAGAGAGGATGTCATGAGAAGACAACACATGGTCACGA
CAAGATACCCAGTTCCAGTGAGGGACGAAGGTGATGACACTAAAGCGTAG
ATGTGTACAACTAGATTCTTTGGTCGGCCACAGAGAAAGAGTCGCAGGTC
AAAGGTTACAGGGACTGAAGGAGGACCGAAGATGCCTATGTTTGGGAAAA
GAACACTCTTCCAGTGGTTTCGATTTGCATGGGAGAGGGAACCTGTGATA
GTTGCGGCCATTGTGGTTGGAGTACTCCCTCCCTTTGGTGTGCTCTTCAT
GCCTGAGAGCTGGAGAGAGGATGTCATGAGAAGACAACACATGGTCACGA
CAAGATACCCAGTTCCAGTGAGGGACGAAGGTGATGACACTAAAGCGTAG
ATGTGTACAACTAGATTCTTTGGTCGGCCACAGAGAAAGAGTCGCAGGTC
AAAGGTTACAGGGACTGAAGGAGGACCGAAGATGCCTATGTTTGGGAAAA
GAACACTCTTCCAGTGGTTTCGATTTGCATGGGAGAGGGAACCTGTGATA
GTTGCGGCCATTGTGGTTGGAGTACTCCCTCCCTTTGGTGTGCTCTTCAT
GCCTGAGAGCTGGAGAGAGGATGTCATGAGAAGACAACACATGGTCACGA
CAAGATACCCAGTTCCAGTGAGGGACGAAGGTGATGACACTAAAGCGTAG
ATGTGTACAACTAGATTCTTTGGTCGGCCACAGAGAAAGAGTCGCAGGTC
AAAGGTTACAGGGACTGAAGGAGGACCGAAGATGCCTATGTTTGGGAAAA
GAACACTCTTCCAGTGGTTTCGATTTGCATGGGAGAGGGAACCTGTGATA
GTTGCGGCCATTGTGGTTGGAGTACTCCCTCCCTTTGGTGTGCTCTTCAT
GCCTGAGAGCTGGAGAGAGGATGTCATGAGAAGACAACACATGGTCACGA
CAAGATACCCAGTTCCAGTGAGGGACGAAGGTGATGACACTAAAGCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000183 | genome | Sc0000183:579643..585204 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75059_cuf1 |
| Biotype | protein_coding |
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