|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75035_cuf0 >transcript:BL75035_cuf0-protein ID=transcript:BL75035_cuf0-protein|Name=transcript:BL75035_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=124bp
MVHRAAFLLKAVGIVLLTSTIQLSHASGYFELQINSIQNIAGQLISGNCC
DGVKDYDGSCTQNACDTYFRVCLKEYQVKPSASGSCTFGRYTSPVLGGNS
FSLLTNNGNNAGRVRLSFDFGWTV Run BLAST on NCBI mRNA from alignment at xfSc0003069:815..1961+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75035_cuf0 ID=transcript:BL75035_cuf0|Name=transcript:BL75035_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1147bp|location=Sequence derived from alignment at xfSc0003069:815..1961+ (Branchiostoma lanceolatum)
GGAGAGTCAAGACGAAGTAAAGCGATCGCCCCCACGGCTGTTGGCAAAGA
GTGCGAGGGGGTGATCCAGAGAAGGCCTTCTCATGTTCCCCCTACCAACC
GCAGCCTATCGACCGCCCTGTCCCACCGACACCGTACGGTATTTACCCGC
CTGTCCCCCGCAGCCATGCCCTCTCAGGTCCCCGCCAGCAGTCGGGCATG
GTCTTCCTTCGTCATTCCCCGATATTTCGTCCAATTTCCTCACTTCTTGT
GCGATGTACGGTGCGTACAGCATACCCTGGGAAAATTTTAGGTCAAATTA
GTCACACGCCTATCAACTTTCGCCTATAATAGACAATGTTTACACAACAT
CTCATTAAAATAGGACAATAGCCAATAGAAAGAAACGTCAACTTGTCGGC
ACGGAATACATAATTGATCTGCGCATGCGGCCTGTGGGCGGCGCCTCCAA
AATAATGCATCTGTCGGCCGCTGCGGTTCCCACAGCTCGAAGCCCAGGCT
GCTGTGTAATTATTTTTTCGATCGGCTAGGAATACCGTCGTCGTGCATGC
TCAACTTAAGCGATTCCAGCGCCGTTGATCGGCCCCCGTTTCCCCCACGA
TCACTCAGGAAGACTGTTGGGAACTTTGCACGAAGTAGGCATGGTTCATA
GAGCGGCTTTCCTACTTAAAGCTGTTGGAATAGTGCTGCTAACTTCCACG
ATACAGGTACTATTTTCAGTTTTATAATGAGCGGTACGCGTGCTATTTCA
CATTGCATTTTTCATTACACTGATATGACTTTCTCATGTTTCTTATATAT
GTATATAATATCGTGTGTTTTTGTGAATTTGTTCTTCCAGCTTTCCCATG
CTTCTGGATACTTTGAGCTGCAAATCAACTCGATACAGAATATCGCGGGC
CAGCTCATCAGTGGAAACTGCTGCGATGGAGTGAAAGATTATGACGGGTC
TTGTACACAAAATGCGTGTGATACTTACTTCAGGGTTTGCCTTAAGGAGT
ACCAAGTGAAACCATCGGCAAGTGGAAGCTGTACGTTTGGGAGATACACC
AGTCCCGTGTTGGGTGGAAATTCTTTTTCCCTGCTGACAAACAATGGAAA
CAATGCGGGACGAGTCCGGCTTTCTTTCGACTTCGGTTGGACGGTAA Coding sequence (CDS) from alignment at xfSc0003069:815..1961+ >transcript:BL75035_cuf0 ID=transcript:BL75035_cuf0|Name=transcript:BL75035_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=744bp|location=Sequence derived from alignment at xfSc0003069:815..1961+ (Branchiostoma lanceolatum)
ATGGTTCATAGAGCGGCTTTCCTACTTAAAGCTGTTGGAATAGTGCTGCT
AACTTCCACGATACAGCTTTCCCATGCTTCTGGATACTTTGAGCTGCAAA
TCAACTCGATACAGAATATCGCGGGCCAGCTCATCAGTGGAAACTGCTGC
GATGGAGTGAAAGATTATGACGGGTCTTGTACACAAAATGCGTGTGATAC
TTACTTCAGGGTTTGCCTTAAGGAGTACCAAGTGAAACCATCGGCAAGTG
GAAGCTGTACGTTTGGGAGATACACCAGTCCCGTGTTGGGTGGAAATTCT
TTTTCCCTGCTGACAAACAATGGAAACAATGCGGGACGAGTCCGGCTTTC
TTTCGACTTCGGTTGGACGGTAATGGTTCATAGAGCGGCTTTCCTACTTA
AAGCTGTTGGAATAGTGCTGCTAACTTCCACGATACAGCTTTCCCATGCT
TCTGGATACTTTGAGCTGCAAATCAACTCGATACAGAATATCGCGGGCCA
GCTCATCAGTGGAAACTGCTGCGATGGAGTGAAAGATTATGACGGGTCTT
GTACACAAAATGCGTGTGATACTTACTTCAGGGTTTGCCTTAAGGAGTAC
CAAGTGAAACCATCGGCAAGTGGAAGCTGTACGTTTGGGAGATACACCAG
TCCCGTGTTGGGTGGAAATTCTTTTTCCCTGCTGACAAACAATGGAAACA
ATGCGGGACGAGTCCGGCTTTCTTTCGACTTCGGTTGGACGGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003069 | genome | xfSc0003069:815..1961 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75035_cuf0 |
| Biotype | protein_coding |
|
