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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73294_cuf0 >transcript:BL73294_cuf0-protein ID=transcript:BL73294_cuf0-protein|Name=transcript:BL73294_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=179bp
HTHTRTHNKLCIPIDVHQQLECGFESPHLFRVWVDGRELNQHVEEEDRRP
AHGVQEHHHQQHLHHLVGQFGVLPGKLAAEGANGGQVGSLEVSGVAAAGA
VRRGLGHLQWSKRNQNNLHRNKENKNKQRGLIWNMFEGRPAVGGYHDDDR
DEEEEDGDVDGVQTRVERAGPDLLAVVDR Run BLAST on NCBI mRNA from alignment at Sc0000001:8068729..8070777+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73294_cuf0 ID=transcript:BL73294_cuf0|Name=transcript:BL73294_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2049bp|location=Sequence derived from alignment at Sc0000001:8068729..8070777+ (Branchiostoma lanceolatum)
CACACACACACACACGCACACACAATAAACTTTGCATACCTATTGATGTA
CACCAGCAGCTCGAATGTGGTTTTGAGAGCCCACACTTGTTCCGTGTTTG
GGTTGATGGCCGAGAACTCAATCAGCATGTTGAGGAGGAGGATCGGCGCC
CAGCACATGGTGTACAGGAACACCACCATCAGCAGCATCTTCATCACCTG
GTGGGGCAGGTAAATCCATTGTTTTCTTTGATAAAATTCATGTACATCCA
TTCAATAACAGGCTTCAGTAGAGACAAGGCACGTAAAGGAAGGCATTACT
CATTTTACGTAAGGAGACTATTAAGTTTACATATGCGAACATCATCCGAT
TCCCCTTGACAACTTTGGCCTTTTGCTCAACTGTTCATCCGCTCGAATTC
GGATACCAGGTGACAAAATGAAGACATTTCACAGTAAGAGAAACTCTTCA
TTTTTGACTCCGTGTATTGAGTTTTCGGCGTTTGGGTTTTGCACATATTT
GGGTGACAGCAAGTGATTGAGAAGATGACCGGAAAGGTCAGACTTGTCGG
AGTGGAAGGAAGTACAGGAAGAACAGGTCAGAGGTGGTAGAACTGGCGGT
GATTACGACATGACAGTCCAGGTCAAACAAGAGGCTTCTACATGTAATTT
ATGGGGAGACATTTTTTGGGTCTGTCTGTTAACGTTTATCCCTGTTTTCG
CAGTTATATATTTTCCACATGTTAGTCTAACCTGTTGTTTTTCCAGTTTG
GAGTTCTTCCTGGAAAACTTGCCGCTGAAGGGGCTAATGGTGGACAGGTG
GGTTCTCTGGAAGTCTCGGGTGTCGCCGCGGCCGGAGCTGTTAGGCGTGG
ACTTGGTCACCTGCAATGGTCGAAGAGGAATCAGAACAACCTGCATCGAA
ATAAAGAAAACAAAAACAAACAACGGGGGTTGATTTGGAACATGGTAGGC
ATCGAAATAAAACAATGGTGTAGATTTGGAACTGTATCCACAAACAGTAC
CGTGACTTCTGAAACAAGTTTTAAATGTAATTTCCAACACAAAAATTGGA
CTTACCCAATTTTGTTACTGTAACAACATTAGTCTCTGTCAAGACTGGTG
TTGTACAGTCAAAAATTTGAGTAAGTTCAATTTTTGTGTTGGAAATTACA
GTTAAAGCTCGTTTCAGAATGATTTCTACCAACACAGATGAACTTTCATG
TTAAGAATCGTTACTTATAAAAGTAGGGTGGTGTTGTGATAGAACGTAAT
GAGACAAAGAAACAAAGCTAACAAAGCATACACATCTGCGGTATGCACTT
AACGAAATGCATGTACATTCGTAAATGTGAATTTTAACAGCGCTATGAAG
GGGAAAGGGATATCTGGCAACACAGAGAGTGAAGCTAGCTACTGAAACTG
CTCAAAAGCTATAATAAGTACAATGCTAGAAGGAAACGATTACTAGTGCA
TCCGTCCCTGGCAAATTTCTCATCACTCTCTGCATAGAACAATATATATA
GCCTGGGTGACATTCTATTTATTGAGGGAACGAGTATGGGAGCGCCGGTG
AATTAAGTAGGATGGCATTCAGGCTACCCGCACAATGCCCTTGCTAAGAA
TGGTCATTCTTGCGCTCCGAATCACCATCTTGGATCTATGCGTTCCACCA
ATATGGCGGCGCGCTGATACATGTATAATCTACATATCATCTTTGAGCAT
TATAACGCTACTTCACCTAAACCCGGGATTTCACATACATTTTTATAACG
AGGCATTTAAGGATACATGCCAGATGCAATATCAGTAATAATAACGCCGG
AAATAGAAACTTGACAGAATAACGTGTTCAGATCACCGTCTGAAAAGCTT
CGATAACCCCCGGATTAAGATGAAGTAGCGATACATATACACTGCTTACC
TCTTCGCTGGCCCACAGTTCGAAGGACGCCCTGCCGTAGGCGGTTACCAT
GACGATGACAGGGATGAAGAAGAGGAAGATGGCGACGTAGATGGCGTACA
GACGCGAGTAGAGCGGGCCGGGCCAGACCTTCTGGCAGTGGTAGACCGT Coding sequence (CDS) from alignment at Sc0000001:8068729..8070777+ >transcript:BL73294_cuf0 ID=transcript:BL73294_cuf0|Name=transcript:BL73294_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1611bp|location=Sequence derived from alignment at Sc0000001:8068729..8070777+ (Branchiostoma lanceolatum)
CACACACACACACGCACACACAATAAACTTTGCATACCTATTGATGTACA
CCAGCAGCTCGAATGTGGTTTTGAGAGCCCACACTTGTTCCGTGTTTGGG
TTGATGGCCGAGAACTCAATCAGCATGTTGAGGAGGAGGATCGGCGCCCA
GCACATGGTGTACAGGAACACCACCATCAGCAGCATCTTCATCACCTGGT
GGGGCAGTTTGGAGTTCTTCCTGGAAAACTTGCCGCTGAAGGGGCTAATG
GTGGACAGGTGGGTTCTCTGGAAGTCTCGGGTGTCGCCGCGGCCGGAGCT
GTTAGGCGTGGACTTGGTCACCTGCAATGGTCGAAGAGGAATCAGAACAA
CCTGCATCGAAATAAAGAAAACAAAAACAAACAACGGGGGTTGATTTGGA
ACATGTTCGAAGGACGCCCTGCCGTAGGCGGTTACCATGACGATGACAGG
GATGAAGAAGAGGAAGATGGCGACGTAGATGGCGTACAGACGCGAGTAGA
GCGGGCCGGGCCAGACCTTCTGGCAGTGGTAGACCGTCACACACACACAC
GCACACACAATAAACTTTGCATACCTATTGATGTACACCAGCAGCTCGAA
TGTGGTTTTGAGAGCCCACACTTGTTCCGTGTTTGGGTTGATGGCCGAGA
ACTCAATCAGCATGTTGAGGAGGAGGATCGGCGCCCAGCACATGGTGTAC
AGGAACACCACCATCAGCAGCATCTTCATCACCTGGTGGGGCAGTTTGGA
GTTCTTCCTGGAAAACTTGCCGCTGAAGGGGCTAATGGTGGACAGGTGGG
TTCTCTGGAAGTCTCGGGTGTCGCCGCGGCCGGAGCTGTTAGGCGTGGAC
TTGGTCACCTGCAATGGTCGAAGAGGAATCAGAACAACCTGCATCGAAAT
AAAGAAAACAAAAACAAACAACGGGGGTTGATTTGGAACATGTTCGAAGG
ACGCCCTGCCGTAGGCGGTTACCATGACGATGACAGGGATGAAGAAGAGG
AAGATGGCGACGTAGATGGCGTACAGACGCGAGTAGAGCGGGCCGGGCCA
GACCTTCTGGCAGTGGTAGACCGTCACACACACACACGCACACACAATAA
ACTTTGCATACCTATTGATGTACACCAGCAGCTCGAATGTGGTTTTGAGA
GCCCACACTTGTTCCGTGTTTGGGTTGATGGCCGAGAACTCAATCAGCAT
GTTGAGGAGGAGGATCGGCGCCCAGCACATGGTGTACAGGAACACCACCA
TCAGCAGCATCTTCATCACCTGGTGGGGCAGTTTGGAGTTCTTCCTGGAA
AACTTGCCGCTGAAGGGGCTAATGGTGGACAGGTGGGTTCTCTGGAAGTC
TCGGGTGTCGCCGCGGCCGGAGCTGTTAGGCGTGGACTTGGTCACCTGCA
ATGGTCGAAGAGGAATCAGAACAACCTGCATCGAAATAAAGAAAACAAAA
ACAAACAACGGGGGTTGATTTGGAACATGTTCGAAGGACGCCCTGCCGTA
GGCGGTTACCATGACGATGACAGGGATGAAGAAGAGGAAGATGGCGACGT
AGATGGCGTACAGACGCGAGTAGAGCGGGCCGGGCCAGACCTTCTGGCAG
TGGTAGACCGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:8068729..8070777 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73294_cuf0 |
| Biotype | protein_coding |
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