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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73153_cuf0 >transcript:BL73153_cuf0-protein ID=transcript:BL73153_cuf0-protein|Name=transcript:BL73153_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
MGKCFSAAVDAFDDDNHSHHSHGSHGHGHGHHGHGHGHHGHGHHGHHNLL
GCCLGLCCGHKMRSRASSHSSHGSHHSHHSHHSHKHKKHHKKHKHGHGHG
HRRGSHSS Run BLAST on NCBI mRNA from alignment at Sc0000055:1214904..1217593- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73153_cuf0 ID=transcript:BL73153_cuf0|Name=transcript:BL73153_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2690bp|location=Sequence derived from alignment at Sc0000055:1214904..1217593- (Branchiostoma lanceolatum)
TGAGGACAACGCAAACAAACACTGCCATGTGTATATAATTATGTAGCCAC
GGTAAGGGCGGAGTTTACATTTGGTTCAGCTTCAGGATTTCGCTGTCAAA
CTCTCTCTCTTTCTTTGGGTTTGGGGTATAGTGAGTTTGAGCAGCGATGG
GAAAGTGTTTTTCGGCAGCAGTGGACGCCTTCGATGATGATAACCACAGC
CACCACAGTCATGGCAGTCACGGGCACGGGCATGGTCATCACGGGCACGG
GCATGGACATCACGGGCACGGACACCACGGCCATCACAACCTACTGGGCT
GCTGCCTAGGACTGTGCTGTGGCCACAAGATGCGGTCAAGGGCGAGCTCC
CACTCTAGCCACGGCTCGCACCACTCTCATCACTCGCACCATTCTCACAA
GCACAAGAAGCATCATAAAAAACACAAGCACGGCCACGGTCACGGCCACA
GGAGGGGATCACACTCGAGCTGAACAATCTGGTAAGGAATTGTCAAGTTA
TTGCATTGGTTATGTATAATAATTTTAATAATGATTTTACCGCTAGTACA
TGTATATTACAGAGCTGATATGTGATTTTTGTGGCAGAGACTGTCATTCT
CGTCATGATAGGGCTGTTTAGCCATAGTCGATGCTGTAGGGCTGTTGTGA
ATTAGGATTTTACCATGGTCAGTACTGACCGACGGAGGCCATATATATAC
ATAGATATGCTATGTAACATGTGCTATTTTAATATGATCTGTGTATATGT
CTCCCTCTCTCTGTTAGTCTAAAATGATACTGACTGTGAATAAAAAAAGC
AAAGAATCAACTCTAGTTTTTTGCCTTCCGAACCTTCGAAATAAACGCCT
CGCGTCCTTGAAGCGTATTTGGGTCAAAGTTCACTTCACCGCCATGTAGT
AGATACTTAAGTACCCATAGGAGTTATATGCTAAATATCTCAAGTTATTT
TGTAGCTAATATTGGTCTGAGTTGAACAAAAAATTCTCTCAGCTGGTAGG
AAAGTCTGATTTTAACACAGGGGGTTGTCAAAAACAGGGCGTTACCAACG
AACGTCGAACAAATGTATTTACATAGGGCGGACCCTTAACGTGCCATGTT
GTCACCAAGGAACAGGCGTGCCTCGTTACGTAAGGCGTAAGAAAGCAAAC
GGTGGGAAATACAACAATGGTACAACAGGCATATATGTGTCGACTCAGCT
GTGTTCTACACTAAACTAAATTTGGTATATTGAAATTACAAGATTGACAA
CTCAAGCAAGCTTCTTCTGTGATCTCGTAGTGTCCTTTATTAGACCATTA
TTTTGTTGTGAAATTAAATAATCTACGCAATAAAGGTGTCAGTTTATCAA
TAGAAATACCTTCTTGTCCACCCTAGAAAGCTATGTTAAAAATTTTGACG
TTACGTCACACGTTTGGCATTAGTGTGCCTAGCAACGGTACAATGCAAAA
TGTTCGGATGAATTTTGGTATGTTACGTATGAAAAAGGGAAAATAGTAAG
ACCTACATATAAGACAAGCGAACTCTACTTTTGACTGACAAAAATGGTGC
CTTAACGTTTCTTAAAACATGTACTGTACTTCTCTGAGACAGTCTAGAAT
TTACGCTTCATTTGTACGTTTCAGAAGTTGGACTATACGATCTCTGGGTC
AGCAAACGACGGACCTTTTCTACGGAGAGGGGCACAGGAGCAACAGTCTA
CTGCAGTACTCAGCCGTCCATCTATCTAAAGACCTTCTATGCACAGCCCA
ACACATTGATTTCTATTGTTTGTATACATATAGAACGACACAAAATTCAC
AGGTGCAAAAGTAACATGCAACCTCCAAACTTCAAGGCTGAACTTGAGTT
CTGAGCTTTCGAAACAAAGCAACTAGACTCACTCATTGCTTTTGCTCACA
AAATGTTTCATAAAAATGTTGTAAAATACTGAAGAATATTTTTTAAATGT
CTGAGAGATGATGATATAGATATGTTGTACATCTATTTTTGATAAAGACA
TATGTGCCAGAGTACAGTTTGAAACGTTTTGATACTCTGCGTGTTTAAAT
CAAAGCAGTGCCGAGGCAATATAGCGATTACAAAGACCCTGTGCACTTTA
TTGTGGTCATAGTAAGCTAATTTGTTTTCTTGTGTTTGTGTGTATCCATG
ACTAAATGAGTTGACCTATCTTAATACAATACTCCAAAGTGCACAGGGGT
CAATGTGAATGTCTAATAGGTCTGTAACAAAACGGAAGGTCCTGTTGATA
GTTTTGTTTTGTAGTTCTCTATACAGAACTGTATGTGCCGAAAGTTTTCT
GAATCGCGAGGAAGTTTTCATAGTCTCTAAAGGATCATAATTAGAGGAGC
CAACAGACATCGCTTCCTCATTTCTAAATCATAAACAGTTACATGTGTTA
CCGAAATACGTTCCTAGTAAAAATGCCTGTTCTACTTTGTGTACATGATT
TCAAAGCATGTTTTGGCAACTGATGCATACTGACGACTTTTCCATTTGTT
GATTTGATGATAGTTTGTTCACAGTTTTTATCAAGCACACTTATTGTTTT
TCTGTATAAGATCACCTCTAACTGTCATAAATCATCTAATATATCGGAGT
TGTTATAAACAAGATGTGTGAATATTTGTTTTGCATTTTTCATGTTTGTA
AGGAGATCAAGGCTCACTCAACCCTCACCGCATTCTCGTG Coding sequence (CDS) from alignment at Sc0000055:1214904..1217593- >transcript:BL73153_cuf0 ID=transcript:BL73153_cuf0|Name=transcript:BL73153_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000055:1214904..1217593- (Branchiostoma lanceolatum)
ATGGGAAAGTGTTTTTCGGCAGCAGTGGACGCCTTCGATGATGATAACCA
CAGCCACCACAGTCATGGCAGTCACGGGCACGGGCATGGTCATCACGGGC
ACGGGCATGGACATCACGGGCACGGACACCACGGCCATCACAACCTACTG
GGCTGCTGCCTAGGACTGTGCTGTGGCCACAAGATGCGGTCAAGGGCGAG
CTCCCACTCTAGCCACGGCTCGCACCACTCTCATCACTCGCACCATTCTC
ACAAGCACAAGAAGCATCATAAAAAACACAAGCACGGCCACGGTCACGGC
CACAGGAGGGGATCACACTCGAGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1214904..1217593 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73153_cuf0 |
| Biotype | protein_coding |
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