transcript:BL73106_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL73106_cuf0
Unique Nametranscript:BL73106_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL73106_cuf0

>transcript:BL73106_cuf0-protein ID=transcript:BL73106_cuf0-protein|Name=transcript:BL73106_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
QSLVSKASSRLHYLRLLTKQGMCVADLVQIYLSLIRSVLEYGHVLLVGCS
KEQSDSIERVQKRALRIISLGGRRSVPNLPSLKERREAAAVKLFKDMLSP
EHPLHDLVPPQRRTVTGRQLRNKNAFTLPKARTDRLKQSFLHTAVRLYND
SIS
Run BLAST on NCBI

mRNA from alignment at Sc0000243:346714..347335+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL73106_cuf0 ID=transcript:BL73106_cuf0|Name=transcript:BL73106_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=622bp|location=Sequence derived from alignment at Sc0000243:346714..347335+ (Branchiostoma lanceolatum)
ACAATCCCTCGTTTCAAAAGCATCGAGCAGGCTGCACTATCTCAGACTAC
TGACTAAACAGGGGATGTGCGTGGCTGACCTGGTTCAGATTTACCTGTCA
CTTATTCGTAGCGTTCTTGAATACGGTCACGTTCTGCTGGTAGGTTGTAG
CAAAGAACAATCGGACAGCATAGAACGTGTACAGAAACGGGCCCTCCGTA
TTATCTCTCTCGGGGGTAGGCGATCAGTTCCCAACCTACCTTCCTTGAAG
GAACGGAGAGAAGCTGCTGCAGTAAAGCTCTTTAAGGACATGTTAAGTCC
CGAACATCCACTGCATGATCTTGTGCCTCCTCAAAGACGCACAGTTACTG
GCAGGCAACTGAGGAACAAGAACGCGTTCACTCTCCCCAAGGCAAGAACT
GACAGACTGAAACAGTCGTTTCTCCACACTGCAGTCAGACTTTATAATGA
CTCTATTTCCTAGCATTACCATCAGCCTGTGAGTTCGGATCTATGCTTAG
TGTTTGTTAATATATTATGTATTTTTGTTTGTTGACATTCTGCACGTATA
AGTTTCTTTGTAACAAACCTACGCAATTCAGGGTATATCATGTGTGTATT
TCCCTGCCTATGTACGTTTGAG

Coding sequence (CDS) from alignment at Sc0000243:346714..347335+

>transcript:BL73106_cuf0 ID=transcript:BL73106_cuf0|Name=transcript:BL73106_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=462bp|location=Sequence derived from alignment at Sc0000243:346714..347335+ (Branchiostoma lanceolatum)
CAATCCCTCGTTTCAAAAGCATCGAGCAGGCTGCACTATCTCAGACTACT
GACTAAACAGGGGATGTGCGTGGCTGACCTGGTTCAGATTTACCTGTCAC
TTATTCGTAGCGTTCTTGAATACGGTCACGTTCTGCTGGTAGGTTGTAGC
AAAGAACAATCGGACAGCATAGAACGTGTACAGAAACGGGCCCTCCGTAT
TATCTCTCTCGGGGGTAGGCGATCAGTTCCCAACCTACCTTCCTTGAAGG
AACGGAGAGAAGCTGCTGCAGTAAAGCTCTTTAAGGACATGTTAAGTCCC
GAACATCCACTGCATGATCTTGTGCCTCCTCAAAGACGCACAGTTACTGG
CAGGCAACTGAGGAACAAGAACGCGTTCACTCTCCCCAAGGCAAGAACTG
ACAGACTGAAACAGTCGTTTCTCCACACTGCAGTCAGACTTTATAATGAC
TCTATTTCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL73106gene:BL73106Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL73106_cuf0-E1BL73106_cuf0-E1-1564476830-406006Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL73106_cuf0transcript:BL73106_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000243genomeSc0000243:346714..347335 +
Properties
Property NameValue
Transcript idBL73106_cuf0
Biotypeprotein_coding