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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73032_cuf0 >transcript:BL73032_cuf0-protein ID=transcript:BL73032_cuf0-protein|Name=transcript:BL73032_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=699bp
HFKTLHEKSRLKRQDFDATFEKVILNKLEVLQNHNQSQGPLDYLITESEV
NVAIQRLKNKKASGEDMITNEMLKAGKTLLLRPLLNLFNNVLSSGTFPLD
WSRSYIVPVFKAGRKDDPNNYRGISISSCLGKLFTSILNKRLSNFLDEND
ILKPNQTGFRKNYRTSDNIFLLKTLISKYTQSRKQLFACFVDLSKAFDSI
WHGGLLYKLLSTGISGRFFDVMKNLYSQSKASVKTNRGLSETFPVEIGVR
QGCVLSPSLFNLYISDLANELNTGDLDSPLLNTTKVSSLFYADDLVLLST
SQQGLQKAINTLSLYCKKWKLSINLNKTKIMIFNKRGHLFSNFKFQLFNQ
NIEIVSSYSYLGVMFTTGCTFSTAMKTLQKKALRALFSIKSTLGNSNPPI
SVYTKLFDACVVPILTYGAEVWGKIGLNDNSPIEQVHLKFCKAILGVRKN
ASNLATRAELGRYPLWIEVYTRIYSYYKRLVREMPKDSLQYEAFLVQQDL
HRRKIPCWLSNISKILEESGFAYLLLNKDRNTLSAQSELKQRLKDNFLQH
FYSQLNSSGEKGKNGNKLRTYKKFKITYEKEKYLDIQNSNYRRAMTKLRI
SDHPLQIEVGRYNQTPPNNRMCTFCDNDCIEDEIHFILECSLYADMRRSL
VSPIQLDKKYTHLKNNELFTCIMSSKNDDIIGKLCEFVYKCFKKREETL Run BLAST on NCBI mRNA from alignment at Sc0000350:177054..179273- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73032_cuf0 ID=transcript:BL73032_cuf0|Name=transcript:BL73032_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2220bp|location=Sequence derived from alignment at Sc0000350:177054..179273- (Branchiostoma lanceolatum)
ACATTTTAAAACCCTTCATGAAAAATCTAGATTAAAAAGACAAGATTTTG
ATGCCACCTTCGAAAAAGTAATTCTAAACAAACTTGAAGTACTACAAAAC
CATAACCAATCCCAAGGCCCTCTAGACTATCTTATTACAGAATCAGAAGT
CAATGTTGCCATCCAAAGACTCAAGAACAAAAAAGCCAGTGGTGAGGACA
TGATAACAAATGAAATGCTAAAAGCAGGTAAAACTCTCTTACTTCGTCCT
CTTTTAAACTTATTTAATAATGTCCTCTCAAGCGGAACCTTTCCCCTTGA
TTGGTCCAGAAGCTATATTGTCCCAGTATTTAAAGCAGGGAGAAAAGATG
ACCCAAACAACTATCGAGGCATCTCCATATCAAGCTGTCTCGGAAAACTA
TTTACCTCGATTCTAAACAAGAGACTATCAAACTTTCTCGACGAAAACGA
TATTCTAAAACCAAACCAGACAGGATTCCGGAAGAACTACAGAACTTCAG
ACAACATATTTTTACTAAAAACCTTAATCTCTAAATATACTCAGTCAAGA
AAACAGCTGTTCGCTTGCTTTGTAGACCTCTCAAAGGCTTTTGACTCCAT
TTGGCACGGAGGTCTGCTATACAAACTTTTATCAACAGGTATATCTGGAA
GATTCTTTGATGTAATGAAAAACCTATACAGCCAATCCAAAGCCAGTGTC
AAAACAAATCGAGGTCTGAGTGAAACTTTCCCCGTCGAAATCGGAGTCAG
ACAAGGCTGTGTCCTTAGTCCTTCACTATTCAATCTGTACATCAGCGATC
TAGCAAACGAACTAAATACAGGAGATCTAGATTCCCCCCTACTAAACACA
ACCAAAGTATCTAGCCTTTTCTATGCAGACGACCTTGTCCTGTTATCAAC
AAGCCAACAAGGTCTTCAAAAAGCAATAAACACTTTAAGCCTTTACTGTA
AAAAATGGAAGTTATCAATAAACCTAAACAAAACTAAAATAATGATATTT
AATAAAAGAGGACACTTGTTCTCAAACTTTAAATTCCAATTGTTTAACCA
AAACATAGAGATTGTATCGTCTTATAGTTATCTAGGAGTGATGTTTACAA
CGGGTTGTACTTTCAGCACCGCTATGAAAACCCTGCAAAAGAAGGCTTTA
CGAGCCCTCTTCAGTATTAAATCAACTCTTGGAAACAGCAATCCCCCTAT
ATCAGTGTACACTAAGCTATTCGATGCATGTGTAGTTCCAATATTAACTT
ATGGTGCGGAGGTATGGGGCAAGATTGGACTAAACGACAACTCTCCAATT
GAACAAGTACATCTCAAATTCTGTAAAGCAATCCTGGGCGTAAGAAAAAA
TGCCAGCAACCTTGCCACAAGAGCAGAGCTTGGTAGATATCCCCTCTGGA
TTGAAGTGTATACTAGAATCTATTCATACTATAAAAGATTAGTTAGAGAA
ATGCCGAAAGATAGCTTACAATATGAAGCTTTTTTAGTACAGCAGGACCT
ACATAGGAGAAAGATACCATGCTGGCTTTCAAATATTAGTAAAATCTTGG
AGGAGTCAGGCTTTGCCTACCTTTTACTTAACAAAGACCGAAACACGCTA
TCCGCTCAATCTGAACTAAAACAGAGGCTGAAAGACAACTTTCTTCAACA
TTTCTACTCACAACTTAATTCTTCTGGTGAAAAAGGGAAGAATGGAAACA
AATTGAGAACTTACAAAAAATTCAAGATTACGTATGAAAAAGAAAAATAT
CTAGATATACAAAATTCTAACTATCGCCGAGCCATGACTAAACTAAGGAT
CAGCGATCATCCATTGCAAATTGAAGTTGGTAGGTACAACCAGACTCCAC
CAAATAACAGAATGTGTACTTTCTGTGACAATGATTGTATAGAAGATGAA
ATACATTTTATCTTAGAATGCTCACTATACGCAGACATGCGCAGATCCCT
TGTAAGTCCCATACAACTAGACAAAAAATATACGCATCTTAAAAATAACG
AGCTATTCACATGTATCATGTCATCTAAAAACGACGATATAATTGGAAAA
CTATGTGAATTTGTATACAAATGTTTCAAGAAGAGAGAAGAGACTCTGTA
GATTTAGATGGAATATATAACAATGTTCCATTTCTTTTACTTTATGTTAC
CTAATGCATTTAGCCCATGCTGGGCATGAATATGCAATAAAGGTCATTGT
CATTGTCATTGTCATTGTAT Coding sequence (CDS) from alignment at Sc0000350:177054..179273- >transcript:BL73032_cuf0 ID=transcript:BL73032_cuf0|Name=transcript:BL73032_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2100bp|location=Sequence derived from alignment at Sc0000350:177054..179273- (Branchiostoma lanceolatum)
CATTTTAAAACCCTTCATGAAAAATCTAGATTAAAAAGACAAGATTTTGA
TGCCACCTTCGAAAAAGTAATTCTAAACAAACTTGAAGTACTACAAAACC
ATAACCAATCCCAAGGCCCTCTAGACTATCTTATTACAGAATCAGAAGTC
AATGTTGCCATCCAAAGACTCAAGAACAAAAAAGCCAGTGGTGAGGACAT
GATAACAAATGAAATGCTAAAAGCAGGTAAAACTCTCTTACTTCGTCCTC
TTTTAAACTTATTTAATAATGTCCTCTCAAGCGGAACCTTTCCCCTTGAT
TGGTCCAGAAGCTATATTGTCCCAGTATTTAAAGCAGGGAGAAAAGATGA
CCCAAACAACTATCGAGGCATCTCCATATCAAGCTGTCTCGGAAAACTAT
TTACCTCGATTCTAAACAAGAGACTATCAAACTTTCTCGACGAAAACGAT
ATTCTAAAACCAAACCAGACAGGATTCCGGAAGAACTACAGAACTTCAGA
CAACATATTTTTACTAAAAACCTTAATCTCTAAATATACTCAGTCAAGAA
AACAGCTGTTCGCTTGCTTTGTAGACCTCTCAAAGGCTTTTGACTCCATT
TGGCACGGAGGTCTGCTATACAAACTTTTATCAACAGGTATATCTGGAAG
ATTCTTTGATGTAATGAAAAACCTATACAGCCAATCCAAAGCCAGTGTCA
AAACAAATCGAGGTCTGAGTGAAACTTTCCCCGTCGAAATCGGAGTCAGA
CAAGGCTGTGTCCTTAGTCCTTCACTATTCAATCTGTACATCAGCGATCT
AGCAAACGAACTAAATACAGGAGATCTAGATTCCCCCCTACTAAACACAA
CCAAAGTATCTAGCCTTTTCTATGCAGACGACCTTGTCCTGTTATCAACA
AGCCAACAAGGTCTTCAAAAAGCAATAAACACTTTAAGCCTTTACTGTAA
AAAATGGAAGTTATCAATAAACCTAAACAAAACTAAAATAATGATATTTA
ATAAAAGAGGACACTTGTTCTCAAACTTTAAATTCCAATTGTTTAACCAA
AACATAGAGATTGTATCGTCTTATAGTTATCTAGGAGTGATGTTTACAAC
GGGTTGTACTTTCAGCACCGCTATGAAAACCCTGCAAAAGAAGGCTTTAC
GAGCCCTCTTCAGTATTAAATCAACTCTTGGAAACAGCAATCCCCCTATA
TCAGTGTACACTAAGCTATTCGATGCATGTGTAGTTCCAATATTAACTTA
TGGTGCGGAGGTATGGGGCAAGATTGGACTAAACGACAACTCTCCAATTG
AACAAGTACATCTCAAATTCTGTAAAGCAATCCTGGGCGTAAGAAAAAAT
GCCAGCAACCTTGCCACAAGAGCAGAGCTTGGTAGATATCCCCTCTGGAT
TGAAGTGTATACTAGAATCTATTCATACTATAAAAGATTAGTTAGAGAAA
TGCCGAAAGATAGCTTACAATATGAAGCTTTTTTAGTACAGCAGGACCTA
CATAGGAGAAAGATACCATGCTGGCTTTCAAATATTAGTAAAATCTTGGA
GGAGTCAGGCTTTGCCTACCTTTTACTTAACAAAGACCGAAACACGCTAT
CCGCTCAATCTGAACTAAAACAGAGGCTGAAAGACAACTTTCTTCAACAT
TTCTACTCACAACTTAATTCTTCTGGTGAAAAAGGGAAGAATGGAAACAA
ATTGAGAACTTACAAAAAATTCAAGATTACGTATGAAAAAGAAAAATATC
TAGATATACAAAATTCTAACTATCGCCGAGCCATGACTAAACTAAGGATC
AGCGATCATCCATTGCAAATTGAAGTTGGTAGGTACAACCAGACTCCACC
AAATAACAGAATGTGTACTTTCTGTGACAATGATTGTATAGAAGATGAAA
TACATTTTATCTTAGAATGCTCACTATACGCAGACATGCGCAGATCCCTT
GTAAGTCCCATACAACTAGACAAAAAATATACGCATCTTAAAAATAACGA
GCTATTCACATGTATCATGTCATCTAAAAACGACGATATAATTGGAAAAC
TATGTGAATTTGTATACAAATGTTTCAAGAAGAGAGAAGAGACTCTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000350 | genome | Sc0000350:177054..179273 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73032_cuf0 |
| Biotype | protein_coding |
|
