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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72683_cuf0 >transcript:BL72683_cuf0-protein ID=transcript:BL72683_cuf0-protein|Name=transcript:BL72683_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=581bp
DSLIAVRIDLNGCQLLCVCVYMPCDMQANTDSFLEKLGKLEALLEDYNSY
ATVILGDFNASPTSRFGVLLQTFCEETGLHCSDRELLPADSYTYLSDVHA
STSWIDHCLASDTAHQNINNIQVLHDYISSDHFPLCISLDANFPAIAKAA
HSEIPRKITDWARAMPGQIDMYRLSVDSFLSNVEIPLDAMICKDPNCQDQ
AHTNALNLFTCQLIATLKDSANSTITQRTGCNSFTPVPGWNEVVKDLHTA
AREAYILWRESGRPRSGPIFSLMNKARAKFKYALRQCKQEENRARADSTA
KSFNAGHTREFWKKVRSTKSSHSVLPNTIDGCSGAEQIADMWRSHFDKLL
NSVNSEVHRPAVMSDLSTGCPFEFDSGMQISAVEVYDIIRNLPNGKAVGS
DKISNEHLKYAGPKLSICLSLLFSAALVHNFIPKSMLDTTIIPVVKNKTG
NISDSDNYRPIAIASALSKVLEAVLLNRLEPYLQTTAHQFGFKRGHGLDM
CVFTLKQTIEYYRGLGSPVFACFLDASKAFDRVNHWTLFKKLLDRKVPVY
LVRFLVIGTRTKQCVLDGTMFCLPAFMYQMG Run BLAST on NCBI mRNA from alignment at Sc0000094:494812..497022+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72683_cuf0 ID=transcript:BL72683_cuf0|Name=transcript:BL72683_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2211bp|location=Sequence derived from alignment at Sc0000094:494812..497022+ (Branchiostoma lanceolatum)
ATGATAGTCTCATTGCTGTTAGAATAGATTTGAATGGATGTCAATTACTT
TGTGTATGTGTATATATGCCTTGTGATATGCAAGCAAATACTGACTCATT
TCTTGAGAAGCTGGGTAAACTTGAGGCACTCTTGGAGGATTATAATTCGT
ATGCTACGGTAATCTTGGGCGATTTTAATGCCTCTCCTACAAGTAGATTT
GGTGTATTGTTACAGACGTTTTGCGAGGAAACTGGATTACACTGCTCAGA
CAGGGAACTTCTTCCGGCCGATTCTTACACTTACCTCAGTGATGTCCATG
CTTCCACATCATGGATCGATCACTGTCTGGCAAGTGACACGGCTCACCAA
AACATCAACAATATTCAGGTGTTGCATGATTATATCTCCTCTGATCACTT
TCCACTCTGTATCTCTTTAGATGCAAATTTCCCAGCCATAGCTAAGGCTG
CACACTCCGAGATTCCTCGCAAAATCACTGACTGGGCCAGGGCGATGCCA
GGCCAAATAGACATGTATCGTTTATCTGTGGACAGTTTTCTGTCAAACGT
GGAAATTCCACTGGACGCAATGATTTGTAAGGATCCGAATTGTCAGGATC
AAGCGCATACTAATGCCCTCAACCTGTTTACCTGCCAATTAATTGCCACT
CTAAAAGATTCTGCAAATTCCACTATAACTCAAAGAACGGGTTGCAATTC
CTTTACACCTGTCCCCGGATGGAATGAGGTTGTTAAGGATTTGCATACGG
CTGCACGTGAGGCCTACATTCTTTGGAGGGAAAGTGGCCGCCCTCGATCA
GGTCCGATTTTTTCCTTAATGAATAAAGCCAGGGCAAAGTTTAAGTACGC
CCTAAGACAGTGTAAACAGGAGGAAAACAGGGCAAGAGCCGACTCGACTG
CGAAAAGTTTCAATGCCGGCCATACTAGAGAATTCTGGAAAAAGGTCCGT
AGTACTAAATCCTCTCATTCTGTATTACCTAACACTATAGATGGTTGCTC
TGGGGCTGAGCAGATCGCAGACATGTGGAGGAGTCATTTTGATAAACTGC
TGAACTCTGTTAATAGTGAGGTACATAGACCTGCTGTTATGTCTGATTTG
TCGACAGGTTGTCCTTTTGAATTTGATTCGGGGATGCAAATCTCTGCTGT
GGAAGTATATGATATAATTAGAAACTTACCCAATGGAAAAGCGGTAGGGT
CTGACAAAATCAGTAATGAACACCTTAAATATGCGGGGCCTAAGCTTAGC
ATATGCTTATCACTATTGTTTTCAGCCGCGCTTGTCCATAACTTCATTCC
GAAAAGTATGTTAGATACTACCATCATTCCGGTTGTTAAAAACAAAACTG
GTAATATTTCTGATAGTGATAACTATAGACCAATAGCAATTGCATCAGCA
TTATCCAAAGTTCTGGAGGCTGTTTTATTGAACAGGCTAGAGCCATATCT
TCAAACCACTGCTCATCAGTTCGGTTTCAAACGTGGTCATGGTCTTGACA
TGTGTGTATTTACTTTAAAACAGACAATTGAGTACTACCGGGGTCTCGGC
TCTCCAGTTTTTGCTTGTTTTTTAGACGCCTCCAAGGCTTTTGATAGGGT
AAACCATTGGACCCTATTTAAAAAACTCCTTGACAGAAAGGTCCCGGTGT
ATTTGGTGAGGTTTCTGGTTATTGGTACCAGAACCAAACAGTGTGTATTA
GATGGAACAATGTTTTGTCTCCCTGCTTTTATGTATCAAATGGGGTAAGG
CAAGGGAGTCTGCTATCCCCGCTACTATTCAATGTTTATATAGATGATTT
AAGCTCGAGACTCAGTTGTACTAAAGTAGGTTGCTATATAGGAGGCTGTC
TTGTGAACCATCTTTTTTACGCTGACGACATGTGTTTGTTATGTCCTAGC
CTTAAGTCTCTGCAAAAACTTGTAAGTACTTGTGAGGACTTTGGTTTAGA
AAATGATGTATTATTCAATGTAAACAAGACATGCTGCATGTACTTCCCGA
GTGCTAGTTTGCCACTTTTACATCCGCTCCCGTCGATCAAACTGTATGGA
GAGTGTCTGAGATTTGTGACATCATTTGTATATCTTGGAATTGCTATTAA
TGACAGACTGAGTGATGATGACTGTATCCTTGCCCAACTAAGGGGCCTGT
ATTGTCGAGCAAATACTATAATTCGAAAATTTTGTCTTTGTTCACCTACT
ATTAAGAAAAC Coding sequence (CDS) from alignment at Sc0000094:494812..497022+ >transcript:BL72683_cuf0 ID=transcript:BL72683_cuf0|Name=transcript:BL72683_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1746bp|location=Sequence derived from alignment at Sc0000094:494812..497022+ (Branchiostoma lanceolatum)
GATAGTCTCATTGCTGTTAGAATAGATTTGAATGGATGTCAATTACTTTG
TGTATGTGTATATATGCCTTGTGATATGCAAGCAAATACTGACTCATTTC
TTGAGAAGCTGGGTAAACTTGAGGCACTCTTGGAGGATTATAATTCGTAT
GCTACGGTAATCTTGGGCGATTTTAATGCCTCTCCTACAAGTAGATTTGG
TGTATTGTTACAGACGTTTTGCGAGGAAACTGGATTACACTGCTCAGACA
GGGAACTTCTTCCGGCCGATTCTTACACTTACCTCAGTGATGTCCATGCT
TCCACATCATGGATCGATCACTGTCTGGCAAGTGACACGGCTCACCAAAA
CATCAACAATATTCAGGTGTTGCATGATTATATCTCCTCTGATCACTTTC
CACTCTGTATCTCTTTAGATGCAAATTTCCCAGCCATAGCTAAGGCTGCA
CACTCCGAGATTCCTCGCAAAATCACTGACTGGGCCAGGGCGATGCCAGG
CCAAATAGACATGTATCGTTTATCTGTGGACAGTTTTCTGTCAAACGTGG
AAATTCCACTGGACGCAATGATTTGTAAGGATCCGAATTGTCAGGATCAA
GCGCATACTAATGCCCTCAACCTGTTTACCTGCCAATTAATTGCCACTCT
AAAAGATTCTGCAAATTCCACTATAACTCAAAGAACGGGTTGCAATTCCT
TTACACCTGTCCCCGGATGGAATGAGGTTGTTAAGGATTTGCATACGGCT
GCACGTGAGGCCTACATTCTTTGGAGGGAAAGTGGCCGCCCTCGATCAGG
TCCGATTTTTTCCTTAATGAATAAAGCCAGGGCAAAGTTTAAGTACGCCC
TAAGACAGTGTAAACAGGAGGAAAACAGGGCAAGAGCCGACTCGACTGCG
AAAAGTTTCAATGCCGGCCATACTAGAGAATTCTGGAAAAAGGTCCGTAG
TACTAAATCCTCTCATTCTGTATTACCTAACACTATAGATGGTTGCTCTG
GGGCTGAGCAGATCGCAGACATGTGGAGGAGTCATTTTGATAAACTGCTG
AACTCTGTTAATAGTGAGGTACATAGACCTGCTGTTATGTCTGATTTGTC
GACAGGTTGTCCTTTTGAATTTGATTCGGGGATGCAAATCTCTGCTGTGG
AAGTATATGATATAATTAGAAACTTACCCAATGGAAAAGCGGTAGGGTCT
GACAAAATCAGTAATGAACACCTTAAATATGCGGGGCCTAAGCTTAGCAT
ATGCTTATCACTATTGTTTTCAGCCGCGCTTGTCCATAACTTCATTCCGA
AAAGTATGTTAGATACTACCATCATTCCGGTTGTTAAAAACAAAACTGGT
AATATTTCTGATAGTGATAACTATAGACCAATAGCAATTGCATCAGCATT
ATCCAAAGTTCTGGAGGCTGTTTTATTGAACAGGCTAGAGCCATATCTTC
AAACCACTGCTCATCAGTTCGGTTTCAAACGTGGTCATGGTCTTGACATG
TGTGTATTTACTTTAAAACAGACAATTGAGTACTACCGGGGTCTCGGCTC
TCCAGTTTTTGCTTGTTTTTTAGACGCCTCCAAGGCTTTTGATAGGGTAA
ACCATTGGACCCTATTTAAAAAACTCCTTGACAGAAAGGTCCCGGTGTAT
TTGGTGAGGTTTCTGGTTATTGGTACCAGAACCAAACAGTGTGTATTAGA
TGGAACAATGTTTTGTCTCCCTGCTTTTATGTATCAAATGGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000094 | genome | Sc0000094:494812..497022 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72683_cuf0 |
| Biotype | protein_coding |
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