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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72134_cuf0 >transcript:BL72134_cuf0-protein ID=transcript:BL72134_cuf0-protein|Name=transcript:BL72134_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=295bp
MEPTFKDPESGTTYPFTSPTYMYAAPPVTYSVPSSMISHPTVAFQPIPQP
AVSAGTSMSALPNPDVGLPPPVRPKTTSVQRPPPSSMYAPTAPSSFPHSQ
AASKGPPQQFPTEFGPGPTVQHGVTAAKTYGLPPQFSPGYMPAQPQTHCK
THLPPRFRGEGEEDYAVWHHKFYLYTVSQSYDYNACSKVFPTFLDGAAFT
YFISLPRSVQEDYSQAHEALSHAFSQDRFLFTFQHQLASRKRQPGETFTV
FAAELERLVQRAYKGCDAVAIKGMTLTHFINGLDADTLQRVVEAN Run BLAST on NCBI mRNA from alignment at Sc0000143:212970..214018+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72134_cuf0 ID=transcript:BL72134_cuf0|Name=transcript:BL72134_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1049bp|location=Sequence derived from alignment at Sc0000143:212970..214018+ (Branchiostoma lanceolatum)
CTTGAGTCGGCCTGTAAGTGGTAACTTACATTGGCGGCAGCGGCGGGATC
ACTTCGAGCCAACGTCACCGGCGTTCCAGCCCTTCCACGTACTCGGAGGA
CATTTTTTTACACACCGACTTCTCCTCGCCCCCCTCCCACCCCACCTACG
ACCGACTGAACAATGGAGCCAACGTTCAAAGACCCGGAGTCAGGTACTAC
ATACCCGTTCACGTCTCCTACCTACATGTACGCTGCGCCTCCCGTTACCT
ATTCTGTACCATCCTCGATGATTTCCCACCCTACAGTAGCATTCCAACCA
ATTCCACAGCCAGCAGTTAGTGCCGGGACATCCATGTCTGCCCTCCCCAA
CCCAGACGTGGGTCTCCCACCACCAGTCCGTCCAAAGACTACCTCAGTGC
AGCGGCCACCACCCTCATCCATGTATGCACCGACTGCTCCATCCTCATTC
CCCCACAGCCAGGCAGCCAGCAAGGGCCCTCCACAGCAGTTTCCCACGGA
ATTCGGCCCTGGGCCTACCGTCCAGCATGGGGTCACTGCAGCCAAAACGT
ATGGTCTCCCACCACAGTTTTCCCCTGGATACATGCCAGCACAACCACAG
ACCCACTGCAAAACACATTTACCCCCCCGTTTTAGGGGTGAGGGAGAGGA
GGACTATGCAGTTTGGCACCACAAGTTCTATCTCTACACGGTATCTCAGA
GCTATGACTACAACGCATGTTCAAAGGTGTTCCCAACCTTTCTAGATGGG
GCGGCGTTCACATACTTCATCAGCCTGCCTCGCTCCGTCCAAGAAGACTA
CTCCCAAGCTCATGAAGCGTTGTCTCATGCCTTCTCACAGGACCGTTTCT
TGTTCACATTCCAGCACCAGCTGGCATCCCGCAAACGTCAACCTGGTGAG
ACCTTTACCGTGTTTGCTGCAGAACTGGAACGGCTGGTGCAACGCGCCTA
CAAAGGTTGCGACGCGGTTGCCATCAAGGGCATGACGCTAACCCACTTTA
TCAATGGTCTAGATGCGGATACACTGCAGCGTGTAGTTGAGGCAAATCC Coding sequence (CDS) from alignment at Sc0000143:212970..214018+ >transcript:BL72134_cuf0 ID=transcript:BL72134_cuf0|Name=transcript:BL72134_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000143:212970..214018+ (Branchiostoma lanceolatum)
ATGGAGCCAACGTTCAAAGACCCGGAGTCAGGTACTACATACCCGTTCAC
GTCTCCTACCTACATGTACGCTGCGCCTCCCGTTACCTATTCTGTACCAT
CCTCGATGATTTCCCACCCTACAGTAGCATTCCAACCAATTCCACAGCCA
GCAGTTAGTGCCGGGACATCCATGTCTGCCCTCCCCAACCCAGACGTGGG
TCTCCCACCACCAGTCCGTCCAAAGACTACCTCAGTGCAGCGGCCACCAC
CCTCATCCATGTATGCACCGACTGCTCCATCCTCATTCCCCCACAGCCAG
GCAGCCAGCAAGGGCCCTCCACAGCAGTTTCCCACGGAATTCGGCCCTGG
GCCTACCGTCCAGCATGGGGTCACTGCAGCCAAAACGTATGGTCTCCCAC
CACAGTTTTCCCCTGGATACATGCCAGCACAACCACAGACCCACTGCAAA
ACACATTTACCCCCCCGTTTTAGGGGTGAGGGAGAGGAGGACTATGCAGT
TTGGCACCACAAGTTCTATCTCTACACGGTATCTCAGAGCTATGACTACA
ACGCATGTTCAAAGGTGTTCCCAACCTTTCTAGATGGGGCGGCGTTCACA
TACTTCATCAGCCTGCCTCGCTCCGTCCAAGAAGACTACTCCCAAGCTCA
TGAAGCGTTGTCTCATGCCTTCTCACAGGACCGTTTCTTGTTCACATTCC
AGCACCAGCTGGCATCCCGCAAACGTCAACCTGGTGAGACCTTTACCGTG
TTTGCTGCAGAACTGGAACGGCTGGTGCAACGCGCCTACAAAGGTTGCGA
CGCGGTTGCCATCAAGGGCATGACGCTAACCCACTTTATCAATGGTCTAG
ATGCGGATACACTGCAGCGTGTAGTTGAGGCAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000143 | genome | Sc0000143:212970..214018 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72134_cuf0 |
| Biotype | protein_coding |
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