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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71443_cuf0 >transcript:BL71443_cuf0-protein ID=transcript:BL71443_cuf0-protein|Name=transcript:BL71443_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=273bp
LDTKTIIEKDGNLQFEVYRKPTHTDQYLAFDSHHPLEHKLAVIKTLFHRA
DNVITSDEAKTEEHRHLRVALAKCGYQNWTFNKALKPSDQSKKTLKCRPL
TNRNKANITIPYAQGVSEKLRRIFQNFNIATNFKPHSTLRQKLVHPKDRP
EKGIKANVIYKLKCEEPNCNNMYIGETSRPLKERYKEHCRKSANRYSSAI
YHHLKHNQGHSFNFESTDILDREERWFERGIREAIYERMYNPALNRKGGL
RVQLSGTWDNALPTTPHPRTSNI Run BLAST on NCBI mRNA from alignment at Sc0000022:3161326..3162194- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71443_cuf0 ID=transcript:BL71443_cuf0|Name=transcript:BL71443_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=869bp|location=Sequence derived from alignment at Sc0000022:3161326..3162194- (Branchiostoma lanceolatum)
TCTTAGACACCAAAACCATCATAGAGAAGGATGGCAACCTTCAGTTCGAA
GTGTACAGGAAACCGACCCACACTGATCAATATCTGGCCTTTGATTCCCA
TCACCCTTTGGAACACAAACTAGCAGTGATTAAAACTCTCTTCCATCGAG
CAGACAATGTCATTACCTCAGACGAAGCAAAAACAGAAGAACACAGACAT
CTCCGTGTGGCTTTAGCCAAGTGTGGCTACCAAAATTGGACCTTCAACAA
GGCCCTCAAACCTTCTGACCAGTCTAAGAAAACACTCAAGTGCAGACCAT
TGACCAACAGAAACAAGGCCAACATTACCATTCCCTACGCCCAAGGAGTA
TCGGAAAAACTCAGACGTATCTTCCAAAACTTCAACATTGCCACTAACTT
CAAACCTCACTCAACTCTCAGGCAGAAACTAGTCCATCCAAAAGACAGGC
CTGAAAAAGGCATCAAAGCCAATGTCATCTACAAACTGAAATGTGAGGAA
CCGAACTGCAATAACATGTACATTGGGGAGACAAGTCGACCACTAAAAGA
AAGGTACAAGGAACATTGCAGAAAGAGCGCTAACCGCTACTCCTCTGCCA
TTTACCACCATCTAAAACACAACCAGGGACACTCATTCAATTTCGAATCC
ACGGACATCCTAGATCGTGAAGAACGCTGGTTCGAACGGGGAATTAGAGA
AGCAATATATGAGAGGATGTACAACCCCGCCCTCAACAGGAAAGGGGGTC
TACGCGTTCAACTTTCAGGCACCTGGGATAATGCACTGCCCACCACCCCC
CACCCCCGGACAAGCAACATTTAGTTACTGTACTAGAACAACAGTAGCTA
ATTGAACTATTGGCATAAC Coding sequence (CDS) from alignment at Sc0000022:3161326..3162194- >transcript:BL71443_cuf0 ID=transcript:BL71443_cuf0|Name=transcript:BL71443_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=822bp|location=Sequence derived from alignment at Sc0000022:3161326..3162194- (Branchiostoma lanceolatum)
TTAGACACCAAAACCATCATAGAGAAGGATGGCAACCTTCAGTTCGAAGT
GTACAGGAAACCGACCCACACTGATCAATATCTGGCCTTTGATTCCCATC
ACCCTTTGGAACACAAACTAGCAGTGATTAAAACTCTCTTCCATCGAGCA
GACAATGTCATTACCTCAGACGAAGCAAAAACAGAAGAACACAGACATCT
CCGTGTGGCTTTAGCCAAGTGTGGCTACCAAAATTGGACCTTCAACAAGG
CCCTCAAACCTTCTGACCAGTCTAAGAAAACACTCAAGTGCAGACCATTG
ACCAACAGAAACAAGGCCAACATTACCATTCCCTACGCCCAAGGAGTATC
GGAAAAACTCAGACGTATCTTCCAAAACTTCAACATTGCCACTAACTTCA
AACCTCACTCAACTCTCAGGCAGAAACTAGTCCATCCAAAAGACAGGCCT
GAAAAAGGCATCAAAGCCAATGTCATCTACAAACTGAAATGTGAGGAACC
GAACTGCAATAACATGTACATTGGGGAGACAAGTCGACCACTAAAAGAAA
GGTACAAGGAACATTGCAGAAAGAGCGCTAACCGCTACTCCTCTGCCATT
TACCACCATCTAAAACACAACCAGGGACACTCATTCAATTTCGAATCCAC
GGACATCCTAGATCGTGAAGAACGCTGGTTCGAACGGGGAATTAGAGAAG
CAATATATGAGAGGATGTACAACCCCGCCCTCAACAGGAAAGGGGGTCTA
CGCGTTCAACTTTCAGGCACCTGGGATAATGCACTGCCCACCACCCCCCA
CCCCCGGACAAGCAACATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:3161326..3162194 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71443_cuf0 |
| Biotype | protein_coding |
|
