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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71337_cuf4 >transcript:BL71337_cuf4-protein ID=transcript:BL71337_cuf4-protein|Name=transcript:BL71337_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=251bp
MESRIGIREYEDRNGNKQEVSTSYPYRNEKSNKILAHIQPPHKHMGTHSG
EKPYKCEECNRLFSKLSNLKRHLMSHTGEKPYRCEECNKQFSELGSLKRH
VRTHTGEKPYRCEVCSRQFSLLGDLKRHMRIHTGEKPYDCEECSRQFIQQ
GDLKRHIMRTHTGEKPYRCEECSKQFMELGSLKAHMRTHTGEKPYKCEEC
SRQFSWLGSLKTHMRTHTGEKPYRCDECNKRFSRLGNLKRHIKTHIGGRD
L Run BLAST on NCBI mRNA from alignment at Sc0000364:44750..47624- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71337_cuf4 ID=transcript:BL71337_cuf4|Name=transcript:BL71337_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2875bp|location=Sequence derived from alignment at Sc0000364:44750..47624- (Branchiostoma lanceolatum)
CAAACATTGTACCTCCTTTTGTTTCATAATCAAGAGTAACACACCAAACC
TGTTTTATTCACCAACTCCGTCATTATATAAACCCGCCATTGGCTCCTTC
TGCCATAACCGACTCGGCAGACGTGGAGACCTGTGTGTGTACCGCCGTGA
AAACATCGTTCAGTCCTTTGGAGCGTTGTATTTTGGTAGGTACTGCCTTA
ATTACATGTCTAAGTTGCTGAGATTGCTTGTGCGGATCCATTACACTGAT
AGTATTAAAAAGAGACAAGGCAAGCATACAGGTAACAATCACTGTTCCTA
GACCAGCAAGGAGCTTTATCAGGCTTACAATGTATGTAGATATTGAAGCA
CTAAACTAAATTTTGATCTGTGATCGAGAATTTTATAAAACGTGGGTTTT
ATCCGCGCTAAGGAATGAGGCTTTTAGCCGTCTTAGATCCTGTCCGCGAC
GAGGCTTTTAGCCGTGCTGTCCGTGACGAGGCTTTCAGCCGTGCTCGCTT
ACGAGACCTTTAGCCGCGCTCGGTAACGAGGCTTTTAGCAACGCTGTCCG
TCTTTACTTTTGGCCGTGCGGGTTGAAACAAGGCTAAAGCCGTGTTTGTG
CCAATATATCTAAGCCGGTGTGGAGTCCTTTTTAGAATCATCAATGTCTG
CGATCCATAGAATGCTCAACGACTTCGAATTCTCTTTCAAGAATTTCAAA
ATTGCAGACGACAAAAATGAATAAGTTGGATTTTCCCTTTTAGATTTGGA
CCTCGTTCTATCAATTGGGATCCGCCATCTTGGATCGGTCATTTTGAAAG
TTTTGATGTTCTCATGGGCCGAGAAAGCATGTGAAAAGGTTGATAATTTA
AAAAACAGCGTTCCAAAACTAATGACTGATTTCTACATACCGTTTCTTTC
CTTGTTCTTTCCGATCTCCATGTTTTGTCCATAAAACTCATATTGATTAC
TCCAACATTTCTTTACAGGTATTGCATTGTCATGGAGAGCAGGATTGGGA
TCAGAGAATACGAAGATAGAAATGGGAACAAACAAGAAGTTTCCACCAGT
TACCCGTATAGGAATGAGAAGAGCAACAAAATTCTCGCTCATATCCAGCC
GCCTCATAAGCACATGGGGACTCACAGTGGTGAGAAACCCTATAAGTGTG
AGGAGTGCAACAGACTCTTCAGTAAGCTGAGTAATCTAAAGAGGCATTTG
ATGTCCCACACTGGAGAAAAACCCTACAGATGTGAAGAGTGCAACAAACA
GTTCAGTGAACTGGGCTCTCTAAAGAGACATGTGAGGACTCATACTGGAG
AGAAGCCGTATAGATGCGAGGTGTGTAGCCGGCAGTTCAGTCTACTGGGT
GATCTAAAGAGGCATATGAGGATTCATACTGGAGAGAAACCGTACGATTG
TGAGGAGTGTAGCAGGCAGTTCATTCAACAGGGTGATCTGAAGAGGCATA
TCATGAGGACTCATACTGGAGAGAAACCGTACAGATGTGAGGAGTGCAGC
AAACAGTTTATGGAGCTGGGTTCTCTGAAGGCCCATATGAGGACCCATAC
TGGAGAGAAGCCGTACAAGTGTGAGGAGTGTAGCAGGCAGTTCAGTTGGC
TGGGTTCTCTGAAGACCCATATGAGGACTCATACTGGAGAGAAACCATAT
AGATGTGACGAGTGCAACAAGCGGTTCAGTCGGCTTGGTAATTTGAAGAG
ACACATAAAGACACACATTGGGGGAAGGGATCTGTGAAAAAGACAAAAAT
TTTCAAAAAGTTTCAATTAATCTTATCAACTTCCCAACTCAAGTCAAAGT
GGTCAACAAAAAATGATTGTGAAGACTGCATTGGGCGTTTCGGTAGTTTC
GGGGATCAGAAAAGACATACATGTACATTAAAAGAAAGCCGCATAAATGA
AGTTTGCCTGTGCTCGGCTATAGGGTACGGGGCTAGTTACTAAATTAACA
TGATGACTGACTCGCGAGCTTAGAGCGGTCCACCCAAAACGATCATGAAT
ACTACATTGAGCAAATCGCCAGTAGAACAGACGGCGGGAAGGGTGTACTA
GAAAAAGTCACAAAAAAGTTTGATTGTGTCCAACAATAGGATATGAGGCT
ATTTAGAATGTAAGTTGCATTTCATAGGGTCTGGCTACATTTTCGTCACC
AATGTACAGGGAACGCCTCTATTTGTTAGTGGGTCTCGGGTTGATTTTAA
ATCCGAGTTAGAATAATTCATGGATGGTCTCTTTTATTTATCAATTGTGC
TCGTAGCATCACTAGTGTGTATATTGTTGTTAAATGTCTCTCTCCCTTGA
CTCTAGCTTGTTGACCTATGTAGATTAGTCCCAATATAATACACGAATAT
CTTTAAGCTAATTCAAAAGTTTTCTTATAACTTGTATGCAGTTGCTAGTA
TTACATCTAAAAATCAGTTGCTAGTATTACATCTATGAATATGTCCATGT
GTCGAAATTTCTTGTTAATTTGTGTTAGTGATGAATAAAGGTGAAACCAT
TTTCATGTGTACGTGATCTTTCCTTCTTATGAGAAAAATAGTACAGACGG
TTAAACGAAGCGTCAAAACGTTGATTTGATTTGACAGCAACCTCATCGAC
CCCTGATTGACTTATACTAAAAATTTTGGCTGGGGGCATTGGTTAAGTCG
GTAATCTACCTGTAACAAAGTACATAGAATGATCTTTCTATGGATTTTTG
TCGAAAAAGCAACTGCACTGCAAACTAAGGCTTTTATTTCACATTTGGCA
TGTTAACCGGTTAACGTGCCAAACGTAGTCGATGTTAATGGACTAAGGGA
CGTGAAAACGTAATAGACTGGTGCCCTGGACTGAATCCAATAAATAGTAC
ATTGAACTTAATCCTCTCTGTCAAA Coding sequence (CDS) from alignment at Sc0000364:44750..47624- >transcript:BL71337_cuf4 ID=transcript:BL71337_cuf4|Name=transcript:BL71337_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=756bp|location=Sequence derived from alignment at Sc0000364:44750..47624- (Branchiostoma lanceolatum)
ATGGAGAGCAGGATTGGGATCAGAGAATACGAAGATAGAAATGGGAACAA
ACAAGAAGTTTCCACCAGTTACCCGTATAGGAATGAGAAGAGCAACAAAA
TTCTCGCTCATATCCAGCCGCCTCATAAGCACATGGGGACTCACAGTGGT
GAGAAACCCTATAAGTGTGAGGAGTGCAACAGACTCTTCAGTAAGCTGAG
TAATCTAAAGAGGCATTTGATGTCCCACACTGGAGAAAAACCCTACAGAT
GTGAAGAGTGCAACAAACAGTTCAGTGAACTGGGCTCTCTAAAGAGACAT
GTGAGGACTCATACTGGAGAGAAGCCGTATAGATGCGAGGTGTGTAGCCG
GCAGTTCAGTCTACTGGGTGATCTAAAGAGGCATATGAGGATTCATACTG
GAGAGAAACCGTACGATTGTGAGGAGTGTAGCAGGCAGTTCATTCAACAG
GGTGATCTGAAGAGGCATATCATGAGGACTCATACTGGAGAGAAACCGTA
CAGATGTGAGGAGTGCAGCAAACAGTTTATGGAGCTGGGTTCTCTGAAGG
CCCATATGAGGACCCATACTGGAGAGAAGCCGTACAAGTGTGAGGAGTGT
AGCAGGCAGTTCAGTTGGCTGGGTTCTCTGAAGACCCATATGAGGACTCA
TACTGGAGAGAAACCATATAGATGTGACGAGTGCAACAAGCGGTTCAGTC
GGCTTGGTAATTTGAAGAGACACATAAAGACACACATTGGGGGAAGGGAT
CTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000364 | genome | Sc0000364:44750..47624 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71337_cuf4 |
| Biotype | protein_coding |
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