transcript:BL71193_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL71193_cuf0
Unique Nametranscript:BL71193_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL71193_cuf0

>transcript:BL71193_cuf0-protein ID=transcript:BL71193_cuf0-protein|Name=transcript:BL71193_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=228bp
LATRNELGWETLSDRRHLHRLCLFYKIVNGQTRNYLSQLAPTPILSSCSY
ELRNRMNLKPLNYSTNRFARSFVPYSTHHWNNLDLSTRSLNYCQFRTVLL
KTIRPVKLNYLSHGPRLSCVHLLRLRIGTCSLNHSLFTRGLLNSPACNCG
CQRETVPHYLLHCPMYNAQRSTLLGKLSRLLGHTLNFPSLSDNAKVSVLL
RGSPSHSSVVNSNILLTTQNFITTTKRF
Run BLAST on NCBI

mRNA from alignment at Sc0000145:244595..245464+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL71193_cuf0 ID=transcript:BL71193_cuf0|Name=transcript:BL71193_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=870bp|location=Sequence derived from alignment at Sc0000145:244595..245464+ (Branchiostoma lanceolatum)
TTGGCAACTAGGAACGAACTTGGTTGGGAAACACTGTCAGACAGAAGACA
CCTTCATAGATTATGTTTGTTCTATAAAATTGTAAATGGTCAAACCCGAA
ACTACCTGTCTCAACTAGCACCCACACCTATCCTCTCATCATGTTCATAC
GAATTGCGTAATAGGATGAACTTAAAACCTCTAAATTATTCAACAAATCG
TTTTGCCAGGTCCTTTGTTCCGTACTCGACGCACCACTGGAACAACCTCG
ATTTGTCAACTCGCTCTTTAAACTACTGTCAATTTCGAACTGTTCTCCTA
AAAACCATACGACCTGTTAAGCTCAACTATCTTAGCCATGGCCCTCGCCT
TTCCTGTGTTCACCTATTACGCCTTCGCATTGGCACCTGTAGTCTAAACC
ACAGTCTCTTTACTCGAGGATTGCTAAACAGCCCAGCATGTAACTGCGGG
TGCCAACGCGAAACAGTACCACATTATTTACTCCACTGCCCTATGTACAA
TGCCCAACGCTCAACCCTCCTCGGCAAACTCTCCAGGCTCTTAGGACACA
CCCTTAACTTCCCATCATTATCGGACAACGCTAAAGTTTCCGTTTTACTC
CGTGGTAGTCCTTCACATTCATCTGTTGTTAACTCCAATATTCTATTAAC
AACCCAAAACTTCATCACTACAACTAAGCGTTTTTAAAACACAGTTGTCC
TGGCATTTTTTGTAATGTGTCCAACTATTTCATCAGTGGGTGGGAAACTG
GACTTGCGCTTATCCTTTCTTGTAATATTAAGTACAATGTATTATTTTCT
GTCTGATGTGATTTTCCTTTGCTTTTCACTTGTACTTGATTTCTCTCTGT
AAAATATGTATGTTTTTTTT

Coding sequence (CDS) from alignment at Sc0000145:244595..245464+

>transcript:BL71193_cuf0 ID=transcript:BL71193_cuf0|Name=transcript:BL71193_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=687bp|location=Sequence derived from alignment at Sc0000145:244595..245464+ (Branchiostoma lanceolatum)
TTGGCAACTAGGAACGAACTTGGTTGGGAAACACTGTCAGACAGAAGACA
CCTTCATAGATTATGTTTGTTCTATAAAATTGTAAATGGTCAAACCCGAA
ACTACCTGTCTCAACTAGCACCCACACCTATCCTCTCATCATGTTCATAC
GAATTGCGTAATAGGATGAACTTAAAACCTCTAAATTATTCAACAAATCG
TTTTGCCAGGTCCTTTGTTCCGTACTCGACGCACCACTGGAACAACCTCG
ATTTGTCAACTCGCTCTTTAAACTACTGTCAATTTCGAACTGTTCTCCTA
AAAACCATACGACCTGTTAAGCTCAACTATCTTAGCCATGGCCCTCGCCT
TTCCTGTGTTCACCTATTACGCCTTCGCATTGGCACCTGTAGTCTAAACC
ACAGTCTCTTTACTCGAGGATTGCTAAACAGCCCAGCATGTAACTGCGGG
TGCCAACGCGAAACAGTACCACATTATTTACTCCACTGCCCTATGTACAA
TGCCCAACGCTCAACCCTCCTCGGCAAACTCTCCAGGCTCTTAGGACACA
CCCTTAACTTCCCATCATTATCGGACAACGCTAAAGTTTCCGTTTTACTC
CGTGGTAGTCCTTCACATTCATCTGTTGTTAACTCCAATATTCTATTAAC
AACCCAAAACTTCATCACTACAACTAAGCGTTTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL71193gene:BL71193Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL71193_cuf0-E1BL71193_cuf0-E1-1564476830-344779Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL71193_cuf0transcript:BL71193_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000145genomeSc0000145:244595..245464 +
Properties
Property NameValue
Transcript idBL71193_cuf0
Biotypeprotein_coding