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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71134_cuf0 >transcript:BL71134_cuf0-protein ID=transcript:BL71134_cuf0-protein|Name=transcript:BL71134_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
WICGAKPQDETPSETLHAKLGLVDIVSVLWSCRLRWYGHVERASGCINTI
TKMQLPGSRGRGRPRKSWMECVRKDMKVCGLTSVSPLDRAAWKRGVTTSR
LLPTPVSGTPAAV Run BLAST on NCBI mRNA from alignment at Sc0000592:72412..76155- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71134_cuf0 ID=transcript:BL71134_cuf0|Name=transcript:BL71134_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3744bp|location=Sequence derived from alignment at Sc0000592:72412..76155- (Branchiostoma lanceolatum)
GATGGATCTGTGGTGCCAAACCTCAGGATGAAACACCGTCAGAAACTCTA
CACGCTAAACTTGGTCTTGTGGACATTGTCTCTGTGCTGTGGTCTTGCCG
ACTCCGGTGGTATGGACATGTGGAACGTGCCAGTGGCTGCATCAACACCA
TCACCAAAATGCAGTTGCCAGGCAGCAGAGGTCGTGGTAGACCTAGGAAA
TCGTGGATGGAGTGTGTCAGGAAGGACATGAAGGTGTGCGGCCTGACCAG
CGTTAGCCCCCTGGACAGAGCTGCATGGAAGAGGGGTGTGACGACTAGCC
GGCTGCTGCCCACCCCTGTGTCAGGGACCCCGGCAGCAGTATAATCAAAA
TACTGGACACTACTACTACCCTATCGCTTCGCTCCACGCTCCGCGAAGAG
CTTGCTTGCGGCTTTGCCGATGGGTTCCTCGCAGCTTCGCTCGGAACACT
CACCCCAGCTAGGGTTATACCATATTGGGGGACAGCCCTATCGTATGTTC
AACCATAGTGATACCCGAGTACTTCATTTTGGGTCACGGTCACGGTCTAG
TAACCGTTGCCAGTCTAAAGTGGGTCTAATGCACAATACACCTGGACATG
TGGACGTGGCCCAAAGTGGATGATAATTGGTAGTGCATGATAACTGGGAG
TGCTATGTTACAAACATGTACATACTTATGTATAAAACATAATATTACAT
TGTTGTCACGCACAGCATTTCCCTTTATTTTGCAGAAAACAAACACAATT
ATAGTAATAAAATCTTAGCTAGCAACTATTTGCCATGTTGTGCTGAGATA
ATTTATATTGTTCCTTCAAACATGGAAATAGAAGAGGTGAATAAGAATGG
GTCAGCAACCTCTAACCATCTGTTCAACAACTTCAGGTAACTGTTCTAGA
CCACAGGATCTGACTCTGCTCTGTTGTGTTCCCTACAGATGGGTCCTCCC
AGTGTGATCCAGATCCAGGCACAGGACCTGTACCAGCTGCAGCAGTATCT
ACAGGTTAGTAACAAAATAGCCTTAAACTCAAGCATTCAGACTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTAGCTATTGTTTGAGCTAGAAAAAGCTGATAAGATACG
CGGTGTTGAATTTACTTGTGAAATAGGTCAAACATTACACTTCCAGGTAA
ATTGTTTGCAGGGCTCGAAATACTGGGTGCTTGTGCACCTTTGTGCACCT
GAAATTGGAGTTGTGCACCTGATTTTTGACTGTGGGTGCACCAGTGCACC
TAGATATTTTTGTAGGCAATAGGGTAGAGGTACTATATTGAACACTAGTA
TACAGGATATTCTTCAAATCTAAGAATCAGAAAAAGTGATATGATCTTTT
TTGTACTTTGTTTGATGTATTACTTGACAATGTTTAAAATTTTGCACCAG
TGCACCAGTATTCCCAAAAAGGAATTTCGAGCTCTGTGTTGTTACGGCTT
CAGGAGTTTATTCTGTTGTGTACCTAGATGCAAACCTATCTCAGTGCTTT
GTATAAAGAAGAGTCATGACTACGGATCATACTTATGTCTTTCTTTATTT
TATTGCTCATGAATACTAGCTTAGAGTTAGACCCACTTTAGACTGACGAC
GGAATATGGCCGCGTGCCTATTTTTGTAAGCGACAGTTGTCTTTAGACAC
ACAGTCTGGAAGTATCGCGGGACAACCGTCATGCAGGATTCGATTGCATG
TGACCCACAGTGACCTCATCATCATCATCTACTGGTCTCTGCATCTGCAG
TCGTTGAAACGTCCTGCAGCTGCATTCAGTCTTTCTTCATCTTCTTCCAC
TTTTCCTTGTATCCTGCGAGCTCCCTTAGCTCTCGGAGTTTCTTTCCTGT
TGTGGGAGGGCCCCGCCCTCTGTGCTGCAGGTCTCCCTTCAGCATGCTGA
GTAGATTGACTCAATGTCTTCCTCTGCATGCCTTGTATCTGCTGGACCTC
AATGTGTACAAATGAGGTGAAACAGTGACCTCCTGCGTGCAAAATCAAAC
TGAACCTCTTCTTTTCGTCATGCAACAGGTATTTCTATTTGCAACAAGCA
TTGCCCTGCCGATGAGACACTGAGCATGTGCTCAAGAAAGAAAGCCAGCC
TTCTGTTTTCATGATTTTTTTTTCTAAAAGGCCAGCCCTCTGTTTTCATG
ATTTTTTTTTCTAAAATTTTTTTTTTTTTGGAAAATAAAAATCCGTTAAC
CAAGAAATTAAATTGGTNTTTTTTTCTAAAGGCCAGCCTTCTGTTTTCAT
GATTTTTTTTCCAAAATTTTTTTTTTTTTTTAAATAAAAATCCATTAACC
AAGAAATTAAATTGGTGTGGCCCAAAGGCAGAATCTTGGTAAAGAAACTG
CAGATACGAGTTCTGTATGATGCATTGTTTATTTTTTGTGTGCATGTGTG
TTCTGGTAACGCAGAGCCCCGGAAGTCGTGCAAAGTTCGGCAACACAAAA
TGTTGTATGTTTTTATTTTGAATAGGTATTATGCCCGCCATGTACTTTAG
ATTGAACGTAAATGTCCCATCGATGATAAATCATATTTCAATATAGCGCT
CTGCATCACAAAACTCGCATAAAATGAAGATATTTGAAAGGCCGTTTCTT
AGTCTTATTAATTATTCTATACAGTACCAAAACGCGTGGCAAGGTGTTTG
ACTCCTGCGTACGAGCAGCCATACTCCATGGGAGTGAATCTTGCCACGGA
TCTGCAGCACTTGCGTCGCAACGACCGAGCTATGATTAGATGGATCTGTG
GTGCCAAACCTCAGGATGCATATGAAACACCGTCAGAAACTCTACACGCT
AAACTTGGTCTTGTGGACATTGCTTCTGTGCTGCGGTCTCGCCGACTCCG
GTGGTATGGACATGTTGAACGTGCCAGTGACTGCATCAACACCATCACCA
AAATGCAGTTGCCAGGCAGCAGAGGTCGTGGTAGACCTAGGAAATCGTGG
ATGGAGTGTGTCAGGAAGGACATGAAGGTGTGCGGCCTGACCAGCGTAAA
CCCCCTGGACAGAGCTGCATGGAAGAGGGGTGTGACGACTAGCCGGCTGC
TGACCACCCCTGTGTCAGGGACCCCGGCAGCAGTATAATCAAAATACTGG
ATACTACTACTACCCTATCGCTTCGCTCCACGCTCCGCGAAGAGCTTGCT
TGCGGCTTTGCCGATGGGTTCCTCGCAGCTTCGCTCGGAACACTCACTCC
AGCTAGGGTTATACCATATTGGGGGACAGCCCTATTGTATGTTCAACCAT
ATATAGTGATACCCGAGTACTTCATTTTGGGTCATGGTCACGGTCTAGTA
ACCGTTGTCTGTCTAAAGTGGGTCTAATGCACAATACACCTGGACATGTG
GACGTGGCCCAAAGTGGATGATAATTGGTAGTGCTATGTTACAAACATGT
ACATACTTATGTATAAAACATAATATTACATTGTTTTCACGCACAGCATT
TCCCTTTATTTTGCAGAAAACAAACACAATTATAGTAATAAAATCTTAGC
TAGCAACTATTTGCCATGTTGTGCTGAGATAATTTATATTGTTC Coding sequence (CDS) from alignment at Sc0000592:72412..76155- >transcript:BL71134_cuf0 ID=transcript:BL71134_cuf0|Name=transcript:BL71134_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at Sc0000592:72412..76155- (Branchiostoma lanceolatum)
TGGATCTGTGGTGCCAAACCTCAGGATGAAACACCGTCAGAAACTCTACA
CGCTAAACTTGGTCTTGTGGACATTGTCTCTGTGCTGTGGTCTTGCCGAC
TCCGGTGGTATGGACATGTGGAACGTGCCAGTGGCTGCATCAACACCATC
ACCAAAATGCAGTTGCCAGGCAGCAGAGGTCGTGGTAGACCTAGGAAATC
GTGGATGGAGTGTGTCAGGAAGGACATGAAGGTGTGCGGCCTGACCAGCG
TTAGCCCCCTGGACAGAGCTGCATGGAAGAGGGGTGTGACGACTAGCCGG
CTGCTGCCCACCCCTGTGTCAGGGACCCCGGCAGCAGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000592 | genome | Sc0000592:72412..76155 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71134_cuf0 |
| Biotype | protein_coding |
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