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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71122_cuf0 >transcript:BL71122_cuf0-protein ID=transcript:BL71122_cuf0-protein|Name=transcript:BL71122_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
VSCSNGYTMWRGIWYKAFNIRKTFSDAAAACGEDGGTLAMPRDAETNAFL
ISLYKSVSDSLSFWLGLHDQRKEGTFEWVDGSALGTYNNWGPGHPENYGD
NKDCVLYSAVPSEKDKWADLRCGSNIPFICQAVPGNHNPTISRNHFIELT
CSIRLSTLDHHCSFDGVAHHSSSHPC Run BLAST on NCBI mRNA from alignment at Sc0000081:645087..646264+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71122_cuf0 ID=transcript:BL71122_cuf0|Name=transcript:BL71122_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1178bp|location=Sequence derived from alignment at Sc0000081:645087..646264+ (Branchiostoma lanceolatum)
GTATCTTGTTCCAATGGTTACACAATGTGGCGAGGAATCTGGTACAAGGC
CTTCAACATACGGAAGACCTTCAGCGATGCAGCCGCGGCCTGTGGTGAAG
ACGGCGGCACCCTCGCCATGCCCCGAGACGCTGAGACCAACGCCTTCCTG
ATTTCCTTGTACAAGTCCGTGAGCGACAGTTTGTCCTTCTGGCTCGGCCT
GCACGATCAGCGCAAGGAAGGAACCTTTGAGTGGGTGGATGGTTCTGCAC
TTGGGACGTATAACAACTGGGGACCGGGACATCCGGAAAACTACGGGGAC
AACAAAGATTGCGTTTTATACTCCGCAGTCCCATCCGAGAAAGACAAGTG
GGCCGACTTAAGATGTGGCAGCAATATTCCCTTCATATGCCAGGCTGTTC
CAGGTAATCATAATCCTACCATTTCCCGAAACCATTTCATCGAGTTAACA
TGCAGCATCAGACTTAGCACGTTAGACCATCATTGCTCCTTTGATGGCGT
TGCACATCATTCCTCATCCCATCCCTGCTAATTCTGCTCCCTGTTTTCCA
GGACGTCCATAGACGACAGGCGGAACTCTAATCACCACACTGCACAACGG
CCCTCTGACAATTAGCAGTTAACGTAAAACAGGGAATCATGACAATGGGC
CAAAATCAGCACGTCGTTTTCTAAATATTCTGAATAGTTGGTTGGGAAAC
TAATTATATAATGGTGCAGAGGAAATGATAAATGGTATATAATAAAGCAG
TACTGTACAATGGCCTCACGCCACAGTTTTCATATATAAAGAATTTACTG
ATCTTGTTGCACGTAGCCAGAATTTGTTAACATGAAATTCCTTTTTCTGT
TTCTGAAGCGATTTTTTTCCTACAAAATACTTAACAGGCAAGAAGGCAAA
ATGTAAGACGTAAAATCTATNAGAAGGCAAAATGTAAGACCTAAAATCTA
TCAAAAGATTATTTTGTAGTGTTTTTACAATAAGCTGACTTTCTTTTGTT
GTAGTAAGCACGATGCCAGAACTGTTGGTATTTATAGGTTGACGTTCCCT
CGTATAATCAAAGTTGCAGAGATTTTCTTGCTGTTATCAGACGTTTGTAT
ACTGTGCTCATTTCAGCCTTAAGACACCATCGGTGAAATTGTGCACACGT
GCCAGACTGAATAAAAGTTGTACACGGA Coding sequence (CDS) from alignment at Sc0000081:645087..646264+ >transcript:BL71122_cuf0 ID=transcript:BL71122_cuf0|Name=transcript:BL71122_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=531bp|location=Sequence derived from alignment at Sc0000081:645087..646264+ (Branchiostoma lanceolatum)
GTATCTTGTTCCAATGGTTACACAATGTGGCGAGGAATCTGGTACAAGGC
CTTCAACATACGGAAGACCTTCAGCGATGCAGCCGCGGCCTGTGGTGAAG
ACGGCGGCACCCTCGCCATGCCCCGAGACGCTGAGACCAACGCCTTCCTG
ATTTCCTTGTACAAGTCCGTGAGCGACAGTTTGTCCTTCTGGCTCGGCCT
GCACGATCAGCGCAAGGAAGGAACCTTTGAGTGGGTGGATGGTTCTGCAC
TTGGGACGTATAACAACTGGGGACCGGGACATCCGGAAAACTACGGGGAC
AACAAAGATTGCGTTTTATACTCCGCAGTCCCATCCGAGAAAGACAAGTG
GGCCGACTTAAGATGTGGCAGCAATATTCCCTTCATATGCCAGGCTGTTC
CAGGTAATCATAATCCTACCATTTCCCGAAACCATTTCATCGAGTTAACA
TGCAGCATCAGACTTAGCACGTTAGACCATCATTGCTCCTTTGATGGCGT
TGCACATCATTCCTCATCCCATCCCTGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000081 | genome | Sc0000081:645087..646264 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71122_cuf0 |
| Biotype | protein_coding |
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