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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71020_cuf0 >transcript:BL71020_cuf0-protein ID=transcript:BL71020_cuf0-protein|Name=transcript:BL71020_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=337bp
MSTTEDSVDGQNDDRKRELGNSSTDGGASTEGLPLSKEELKTEEACTSND
FIGHSAREHSRRKTVLFNYVPRHHSPGKSTEDARCLLRQKEEPANACKAS
AGTSSAGETTVTTGRSRHGVDPERSEAERSVEKSSDSDQKRFKKGGKELD
TPAISTGVDKQSRCGSPLDALSLLADVGVSLQKIPRGCHDNRPCFVSDET
GVIETFVKTTGKQRDQHRDGISSKRGVSKTMPATRVSHSTQNAIQNTTEY
RDSKAYYQRPYQLAMLSTPSKAPYPTFLAQYQQSQSNLKKQVDGTSAKRK
GLCSPKSTTTGKKQKTTTMSMKAGGTTTNSGAQNVAD Run BLAST on NCBI mRNA from alignment at Sc0000030:1747857..1749005- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71020_cuf0 ID=transcript:BL71020_cuf0|Name=transcript:BL71020_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1149bp|location=Sequence derived from alignment at Sc0000030:1747857..1749005- (Branchiostoma lanceolatum)
AAACAATAAACGAATCTATGTTATCTCTTAACATTGCAATCGGAGATGAA
GACACATAAAGCGTTGCTAGGACTGTCCTTCCAAACGGTGGTAACTGAGT
GAGCCAAGACTATTTTAATGTCCTTCCAGGTCTTGTAATGTCCACAACAG
AAGATTCCGTAGATGGGCAAAATGATGATAGAAAAAGAGAACTCGGTAAC
TCCTCCACAGATGGTGGCGCAAGTACAGAGGGCCTGCCTCTGTCCAAAGA
AGAACTTAAGACAGAGGAGGCGTGTACTAGTAACGATTTTATAGGACATT
CAGCAAGGGAACACAGCCGCCGGAAGACCGTTCTATTCAACTACGTTCCA
AGACATCACAGTCCCGGGAAAAGCACGGAAGACGCCCGCTGTCTCTTGCG
ACAGAAAGAAGAACCGGCTAACGCCTGTAAAGCGTCGGCAGGCACAAGTA
GTGCTGGTGAGACGACAGTGACCACAGGGCGTTCACGGCATGGAGTAGAC
CCAGAGCGTTCTGAGGCAGAGAGGTCAGTAGAAAAGTCGTCTGATTCTGA
CCAGAAACGTTTTAAAAAAGGCGGGAAAGAACTGGACACGCCAGCCATAA
GTACCGGTGTTGACAAGCAGTCTAGATGCGGGTCCCCTCTTGACGCTCTG
TCGCTGCTCGCCGATGTGGGCGTTTCTTTGCAGAAAATACCACGCGGCTG
TCATGACAACAGACCCTGTTTCGTATCAGACGAGACCGGAGTTATCGAGA
CATTCGTGAAGACGACTGGAAAACAGCGTGATCAGCATAGGGACGGTATC
AGCAGCAAACGCGGTGTTTCTAAGACTATGCCTGCTACAAGAGTCTCTCA
TAGCACACAGAACGCCATACAAAATACAACAGAGTACAGGGACTCTAAGG
CATATTATCAACGACCCTATCAGCTAGCCATGCTTTCAACACCGTCTAAA
GCGCCATACCCGACCTTCCTGGCTCAGTATCAACAAAGTCAGAGTAACTT
GAAAAAGCAAGTTGATGGAACATCTGCAAAACGCAAAGGCCTATGCTCCC
CAAAGTCAACGACGACAGGGAAAAAACAAAAGACAACTACAATGAGTATG
AAGGCAGGGGGAACGACAACAAATTCCGGGGCACAAAATGTCGCAGACA Coding sequence (CDS) from alignment at Sc0000030:1747857..1749005- >transcript:BL71020_cuf0 ID=transcript:BL71020_cuf0|Name=transcript:BL71020_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1011bp|location=Sequence derived from alignment at Sc0000030:1747857..1749005- (Branchiostoma lanceolatum)
ATGTCCACAACAGAAGATTCCGTAGATGGGCAAAATGATGATAGAAAAAG
AGAACTCGGTAACTCCTCCACAGATGGTGGCGCAAGTACAGAGGGCCTGC
CTCTGTCCAAAGAAGAACTTAAGACAGAGGAGGCGTGTACTAGTAACGAT
TTTATAGGACATTCAGCAAGGGAACACAGCCGCCGGAAGACCGTTCTATT
CAACTACGTTCCAAGACATCACAGTCCCGGGAAAAGCACGGAAGACGCCC
GCTGTCTCTTGCGACAGAAAGAAGAACCGGCTAACGCCTGTAAAGCGTCG
GCAGGCACAAGTAGTGCTGGTGAGACGACAGTGACCACAGGGCGTTCACG
GCATGGAGTAGACCCAGAGCGTTCTGAGGCAGAGAGGTCAGTAGAAAAGT
CGTCTGATTCTGACCAGAAACGTTTTAAAAAAGGCGGGAAAGAACTGGAC
ACGCCAGCCATAAGTACCGGTGTTGACAAGCAGTCTAGATGCGGGTCCCC
TCTTGACGCTCTGTCGCTGCTCGCCGATGTGGGCGTTTCTTTGCAGAAAA
TACCACGCGGCTGTCATGACAACAGACCCTGTTTCGTATCAGACGAGACC
GGAGTTATCGAGACATTCGTGAAGACGACTGGAAAACAGCGTGATCAGCA
TAGGGACGGTATCAGCAGCAAACGCGGTGTTTCTAAGACTATGCCTGCTA
CAAGAGTCTCTCATAGCACACAGAACGCCATACAAAATACAACAGAGTAC
AGGGACTCTAAGGCATATTATCAACGACCCTATCAGCTAGCCATGCTTTC
AACACCGTCTAAAGCGCCATACCCGACCTTCCTGGCTCAGTATCAACAAA
GTCAGAGTAACTTGAAAAAGCAAGTTGATGGAACATCTGCAAAACGCAAA
GGCCTATGCTCCCCAAAGTCAACGACGACAGGGAAAAAACAAAAGACAAC
TACAATGAGTATGAAGGCAGGGGGAACGACAACAAATTCCGGGGCACAAA
ATGTCGCAGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000030 | genome | Sc0000030:1747857..1749005 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71020_cuf0 |
| Biotype | protein_coding |
|
