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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70785_cuf0 >transcript:BL70785_cuf0-protein ID=transcript:BL70785_cuf0-protein|Name=transcript:BL70785_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=1246bp
LHVATIYFNIFKKMGKKSALVFSSWNVQGSFRKKISDVEFCNYFKNSDIV
CVQETWADNYVDFSIPGYSLFSSNRCRNKRAKRNSGGVATFFKSSFRKGI
SKLESSSVDSIWCKFDKHFFGLENDIFLCNIYIPPESSNSVQIDPFDTIS
SDICKFSNLGDIIILGDLNARTGSLTETYFDVPDDPITNSFSDIKIRNNR
DVKVNNYGKRLIELCSSADLTILNGRFAGDLKGDFTCYHYNGSSVVDYCI
TQRTMLTDIQYIHVNSLSPFSDHCHISFSLSTKHSPLVSKEVSGINPKPT
QFIWNEESKELFEETMKNKDTFSKLSDFCQKTFHSSENAVTSLTEILLDV
SKKSLNRRYNKQNKKTTQAKKNKVWFDQHCWSLRRRLKVLSSTLRKEPWV
QETRIKYFSALRDYKRLIKQRKRNYKNELLTKLEGLNENNPKEFWSLFNF
LDKEVNGKKQSGSIDPNITSNEWTEHFQGLNNLVKHDRFDIAFEKIVTTR
LKHLDNNATSSLDYPFTAQEVLNGLQSLKSGKACGIDSISNEMLKHGAEQ
LCQPLVILFNTILLNGTFPSNWNTSILTPIFKSGDKSNVDNYRGIAISSC
LSKLFTLLLNSRLQNFVESNDLLADTQFGFRKKCRTSDNIFILKSLIEKY
IQKKKGKLYVCFVDMKKAFDSVWRDGLFYKLSNYGVGGKFFNVLQSMYCD
VNYVVRLQNGLSSPFVSTCGVRQGCNLSPLLFNLFINDLPQCFDCDECDP
ASLSYKSLNCLSWADDLALISLSKDGLQNCISKLEMYCNKWKLSVNVSKT
KVLVFSKGATNISLNKFYIYGKEINVTDSYTYLGIPLTSSGKFKTARKYL
KTKAMRALFKLKSLLYSERNIPIHLGLSLFDKFVRPIFLYGAELTCFDQT
SKTVKYIVSKQIPQSSPKNVLSILLKKLGLEDSFPASIRKSVCSDSTHSY
VIRFEKKIDKDKLLRLASDLNLEKDNLVIENLRLPPHIPEFDIIDMNFHK
FLLGVHGKSSNDGIRGELGTFPIKIKAEIQIIKYWHRLLNLPQDTLLREA
YDVLHSGNHDWVNHVNDILNYNGFGHVWTNPRLYQTDMLTNQLRQRLQDI
YIQEWHSSIQNNSKLSIYSALKTRYGQEKYLASIHNFEIRRSITKIRICS
HKLNIEAGRYRKIPRDQRFCPFCPNEIEDESHFIMNCSRYKDKRSKLFTF
ISGCSNEFNALRSVDRFNYILGGDNPYCVQIGIFIKECLDIRTSNV Run BLAST on NCBI mRNA from alignment at Sc0000008:5914456..5918341+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70785_cuf0 ID=transcript:BL70785_cuf0|Name=transcript:BL70785_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3886bp|location=Sequence derived from alignment at Sc0000008:5914456..5918341+ (Branchiostoma lanceolatum)
CTTCATGTAGCTACTATATACTTCAATATCTTCAAGAAGATGGGGAAAAA
GTCCGCATTAGTTTTCTCAAGTTGGAATGTCCAAGGTAGTTTTAGGAAAA
AAATTAGTGACGTAGAGTTTTGTAATTATTTCAAAAATAGCGATATTGTC
TGTGTCCAGGAAACTTGGGCAGACAACTATGTAGATTTTTCTATTCCAGG
ATATAGTCTGTTTAGTAGTAATAGATGTAGGAATAAGAGGGCAAAACGCA
ACTCGGGTGGAGTAGCGACTTTTTTCAAAAGCTCATTTAGAAAAGGGATT
AGTAAATTAGAAAGTAGTTCAGTGGATAGTATTTGGTGCAAATTTGATAA
ACACTTTTTCGGTCTTGAAAATGATATATTTCTTTGCAATATCTACATCC
CTCCTGAATCCTCAAATTCTGTACAAATTGACCCATTTGATACAATATCC
AGTGATATTTGTAAATTTTCGAATCTAGGTGATATAATTATTCTAGGAGA
CCTCAATGCAAGAACTGGATCACTCACAGAAACATATTTTGATGTCCCAG
ATGACCCCATAACAAACAGCTTTTCTGACATCAAGATAAGAAACAACAGG
GATGTTAAAGTAAACAATTATGGTAAACGTCTTATAGAATTATGCTCATC
GGCTGACTTGACTATACTAAATGGTAGATTTGCTGGGGATCTCAAAGGTG
ATTTTACCTGTTATCATTATAATGGGTCGAGTGTCGTAGACTACTGCATT
ACTCAAAGGACAATGCTTACTGATATACAATATATCCATGTTAATTCCCT
ATCACCATTTTCCGATCACTGTCACATCTCTTTTTCGTTGTCGACTAAGC
ATTCTCCTCTTGTTTCAAAAGAGGTTAGTGGAATCAATCCTAAACCAACA
CAATTTATATGGAACGAGGAATCAAAAGAATTATTTGAAGAAACAATGAA
AAACAAAGACACTTTTTCAAAACTGAGTGATTTCTGCCAAAAAACATTTC
ACTCGTCAGAGAACGCCGTCACAAGTTTAACTGAAATACTATTAGACGTA
TCAAAAAAATCCCTAAATAGAAGATATAATAAACAAAACAAGAAAACCAC
ACAAGCTAAAAAGAACAAAGTATGGTTTGACCAACATTGTTGGTCCTTGC
GTCGACGATTAAAAGTATTGTCGTCCACACTGCGGAAAGAACCATGGGTT
CAGGAAACAAGAATTAAGTATTTTTCAGCTTTGAGAGATTATAAAAGACT
TATTAAGCAACGTAAACGGAATTATAAAAATGAGCTACTAACCAAATTGG
AAGGACTAAATGAAAATAATCCTAAAGAATTTTGGTCATTATTTAACTTT
CTTGACAAGGAAGTAAACGGCAAAAAACAAAGTGGTAGTATAGACCCCAA
CATTACTAGTAATGAATGGACAGAACATTTCCAAGGATTAAATAATTTAG
TGAAACATGATAGATTTGACATTGCTTTCGAAAAAATCGTCACTACTCGT
CTCAAACATTTAGATAACAACGCTACAAGCTCCTTAGATTACCCTTTCAC
AGCACAAGAAGTTCTAAATGGTTTGCAATCACTGAAATCTGGAAAAGCAT
GTGGTATAGATTCTATCTCAAATGAGATGCTAAAGCACGGGGCAGAACAA
TTATGTCAACCATTGGTAATTCTGTTTAACACAATTCTACTTAACGGCAC
GTTTCCATCCAACTGGAATACAAGTATTCTAACACCGATTTTTAAATCAG
GAGACAAATCTAATGTTGACAACTACAGAGGGATTGCCATTTCAAGTTGT
TTGTCAAAATTATTTACACTTCTTCTAAATTCTCGATTACAGAACTTTGT
AGAAAGTAATGATCTATTAGCCGACACTCAGTTTGGCTTTAGAAAAAAGT
GCCGAACCTCGGATAATATTTTCATTCTCAAATCACTTATTGAAAAATAT
ATACAAAAAAAGAAAGGGAAATTATATGTTTGCTTTGTCGACATGAAGAA
GGCATTTGACAGTGTATGGCGGGATGGCCTATTCTATAAATTATCGAATT
ATGGTGTTGGTGGTAAATTCTTCAATGTGTTACAATCCATGTACTGTGAT
GTTAATTATGTAGTCAGACTACAAAATGGTTTGTCAAGTCCCTTTGTCTC
CACCTGTGGAGTAAGGCAGGGCTGCAACCTCAGCCCATTATTATTCAATC
TCTTTATCAATGACCTGCCGCAATGCTTTGATTGTGATGAATGTGATCCA
GCATCTTTAAGTTACAAATCACTAAATTGTTTATCTTGGGCAGATGACCT
TGCCTTGATCTCATTGTCCAAAGATGGGCTCCAGAATTGTATAAGTAAGC
TGGAAATGTATTGCAACAAATGGAAACTAAGTGTGAATGTATCTAAAACG
AAGGTGCTTGTTTTCTCAAAAGGCGCCACAAACATATCATTAAATAAATT
CTATATATACGGTAAAGAAATAAACGTTACCGACAGTTATACTTACCTTG
GTATTCCCCTGACGTCTTCGGGTAAATTTAAAACTGCCAGAAAGTATTTA
AAGACTAAAGCCATGAGAGCATTATTCAAACTCAAGTCACTTCTATATTC
TGAAAGAAATATTCCAATTCACTTAGGGCTCAGCCTATTTGACAAATTTG
TACGGCCTATATTTTTATATGGAGCCGAACTAACATGTTTCGACCAAACC
TCTAAAACAGTGAAATATATTGTATCTAAACAAATTCCTCAATCTTCTCC
AAAAAACGTACTCTCTATTCTTTTAAAGAAACTTGGTCTGGAGGATAGTT
TTCCTGCAAGTATTAGAAAAAGTGTCTGTTCAGACTCCACCCATTCTTAT
GTGATTCGTTTTGAGAAAAAAATAGACAAAGATAAATTACTCAGGCTGGC
GTCTGACCTAAATTTAGAAAAAGACAACTTAGTAATTGAAAATTTACGTC
TTCCTCCACATATACCAGAATTTGATATTATTGATATGAATTTCCATAAA
TTTTTACTCGGTGTGCATGGAAAATCATCCAATGACGGTATCCGTGGCGA
ATTAGGAACATTCCCAATCAAGATTAAGGCCGAGATACAAATTATCAAAT
ACTGGCATCGTTTATTAAATTTACCCCAAGATACCCTGTTACGTGAAGCT
TACGACGTTCTACATTCTGGTAATCATGACTGGGTGAACCATGTTAATGA
TATTCTTAACTATAACGGGTTTGGGCATGTATGGACAAACCCTAGACTAT
ATCAGACCGATATGTTAACCAACCAGTTACGACAACGTCTGCAGGATATA
TATATACAAGAATGGCATAGTTCTATTCAAAACAATTCAAAACTGTCCAT
TTATTCCGCCTTAAAGACAAGATATGGACAAGAAAAGTATCTCGCAAGCA
TACATAATTTTGAAATTCGTAGATCAATTACAAAGATAAGAATATGTAGC
CATAAATTGAACATTGAAGCTGGAAGGTATCGTAAAATTCCCCGTGATCA
AAGGTTTTGTCCATTCTGCCCAAATGAAATTGAAGATGAAAGTCACTTTA
TCATGAATTGTTCAAGATATAAGGATAAACGCTCAAAGCTATTCACCTTT
ATATCCGGTTGTTCAAATGAATTCAATGCGCTCCGTTCTGTCGATAGATT
CAATTACATACTAGGAGGTGATAATCCTTACTGTGTACAGATAGGTATAT
TCATCAAAGAATGTTTGGACATTAGAACAAGCAATGTATAAGTATATCAC
ATGCGATATTTCGATATGTTGCCCTATCCCATATGATTGTATGTAATCAA
ACTCATTTGTATGCACTTATTCGTTTGTATGTATGTATGTAGTAGACCTT
ACGAAAGTCGCTGTGCTTTTGTTGTGTCAATAAAGA Coding sequence (CDS) from alignment at Sc0000008:5914456..5918341+ >transcript:BL70785_cuf0 ID=transcript:BL70785_cuf0|Name=transcript:BL70785_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3741bp|location=Sequence derived from alignment at Sc0000008:5914456..5918341+ (Branchiostoma lanceolatum)
CTTCATGTAGCTACTATATACTTCAATATCTTCAAGAAGATGGGGAAAAA
GTCCGCATTAGTTTTCTCAAGTTGGAATGTCCAAGGTAGTTTTAGGAAAA
AAATTAGTGACGTAGAGTTTTGTAATTATTTCAAAAATAGCGATATTGTC
TGTGTCCAGGAAACTTGGGCAGACAACTATGTAGATTTTTCTATTCCAGG
ATATAGTCTGTTTAGTAGTAATAGATGTAGGAATAAGAGGGCAAAACGCA
ACTCGGGTGGAGTAGCGACTTTTTTCAAAAGCTCATTTAGAAAAGGGATT
AGTAAATTAGAAAGTAGTTCAGTGGATAGTATTTGGTGCAAATTTGATAA
ACACTTTTTCGGTCTTGAAAATGATATATTTCTTTGCAATATCTACATCC
CTCCTGAATCCTCAAATTCTGTACAAATTGACCCATTTGATACAATATCC
AGTGATATTTGTAAATTTTCGAATCTAGGTGATATAATTATTCTAGGAGA
CCTCAATGCAAGAACTGGATCACTCACAGAAACATATTTTGATGTCCCAG
ATGACCCCATAACAAACAGCTTTTCTGACATCAAGATAAGAAACAACAGG
GATGTTAAAGTAAACAATTATGGTAAACGTCTTATAGAATTATGCTCATC
GGCTGACTTGACTATACTAAATGGTAGATTTGCTGGGGATCTCAAAGGTG
ATTTTACCTGTTATCATTATAATGGGTCGAGTGTCGTAGACTACTGCATT
ACTCAAAGGACAATGCTTACTGATATACAATATATCCATGTTAATTCCCT
ATCACCATTTTCCGATCACTGTCACATCTCTTTTTCGTTGTCGACTAAGC
ATTCTCCTCTTGTTTCAAAAGAGGTTAGTGGAATCAATCCTAAACCAACA
CAATTTATATGGAACGAGGAATCAAAAGAATTATTTGAAGAAACAATGAA
AAACAAAGACACTTTTTCAAAACTGAGTGATTTCTGCCAAAAAACATTTC
ACTCGTCAGAGAACGCCGTCACAAGTTTAACTGAAATACTATTAGACGTA
TCAAAAAAATCCCTAAATAGAAGATATAATAAACAAAACAAGAAAACCAC
ACAAGCTAAAAAGAACAAAGTATGGTTTGACCAACATTGTTGGTCCTTGC
GTCGACGATTAAAAGTATTGTCGTCCACACTGCGGAAAGAACCATGGGTT
CAGGAAACAAGAATTAAGTATTTTTCAGCTTTGAGAGATTATAAAAGACT
TATTAAGCAACGTAAACGGAATTATAAAAATGAGCTACTAACCAAATTGG
AAGGACTAAATGAAAATAATCCTAAAGAATTTTGGTCATTATTTAACTTT
CTTGACAAGGAAGTAAACGGCAAAAAACAAAGTGGTAGTATAGACCCCAA
CATTACTAGTAATGAATGGACAGAACATTTCCAAGGATTAAATAATTTAG
TGAAACATGATAGATTTGACATTGCTTTCGAAAAAATCGTCACTACTCGT
CTCAAACATTTAGATAACAACGCTACAAGCTCCTTAGATTACCCTTTCAC
AGCACAAGAAGTTCTAAATGGTTTGCAATCACTGAAATCTGGAAAAGCAT
GTGGTATAGATTCTATCTCAAATGAGATGCTAAAGCACGGGGCAGAACAA
TTATGTCAACCATTGGTAATTCTGTTTAACACAATTCTACTTAACGGCAC
GTTTCCATCCAACTGGAATACAAGTATTCTAACACCGATTTTTAAATCAG
GAGACAAATCTAATGTTGACAACTACAGAGGGATTGCCATTTCAAGTTGT
TTGTCAAAATTATTTACACTTCTTCTAAATTCTCGATTACAGAACTTTGT
AGAAAGTAATGATCTATTAGCCGACACTCAGTTTGGCTTTAGAAAAAAGT
GCCGAACCTCGGATAATATTTTCATTCTCAAATCACTTATTGAAAAATAT
ATACAAAAAAAGAAAGGGAAATTATATGTTTGCTTTGTCGACATGAAGAA
GGCATTTGACAGTGTATGGCGGGATGGCCTATTCTATAAATTATCGAATT
ATGGTGTTGGTGGTAAATTCTTCAATGTGTTACAATCCATGTACTGTGAT
GTTAATTATGTAGTCAGACTACAAAATGGTTTGTCAAGTCCCTTTGTCTC
CACCTGTGGAGTAAGGCAGGGCTGCAACCTCAGCCCATTATTATTCAATC
TCTTTATCAATGACCTGCCGCAATGCTTTGATTGTGATGAATGTGATCCA
GCATCTTTAAGTTACAAATCACTAAATTGTTTATCTTGGGCAGATGACCT
TGCCTTGATCTCATTGTCCAAAGATGGGCTCCAGAATTGTATAAGTAAGC
TGGAAATGTATTGCAACAAATGGAAACTAAGTGTGAATGTATCTAAAACG
AAGGTGCTTGTTTTCTCAAAAGGCGCCACAAACATATCATTAAATAAATT
CTATATATACGGTAAAGAAATAAACGTTACCGACAGTTATACTTACCTTG
GTATTCCCCTGACGTCTTCGGGTAAATTTAAAACTGCCAGAAAGTATTTA
AAGACTAAAGCCATGAGAGCATTATTCAAACTCAAGTCACTTCTATATTC
TGAAAGAAATATTCCAATTCACTTAGGGCTCAGCCTATTTGACAAATTTG
TACGGCCTATATTTTTATATGGAGCCGAACTAACATGTTTCGACCAAACC
TCTAAAACAGTGAAATATATTGTATCTAAACAAATTCCTCAATCTTCTCC
AAAAAACGTACTCTCTATTCTTTTAAAGAAACTTGGTCTGGAGGATAGTT
TTCCTGCAAGTATTAGAAAAAGTGTCTGTTCAGACTCCACCCATTCTTAT
GTGATTCGTTTTGAGAAAAAAATAGACAAAGATAAATTACTCAGGCTGGC
GTCTGACCTAAATTTAGAAAAAGACAACTTAGTAATTGAAAATTTACGTC
TTCCTCCACATATACCAGAATTTGATATTATTGATATGAATTTCCATAAA
TTTTTACTCGGTGTGCATGGAAAATCATCCAATGACGGTATCCGTGGCGA
ATTAGGAACATTCCCAATCAAGATTAAGGCCGAGATACAAATTATCAAAT
ACTGGCATCGTTTATTAAATTTACCCCAAGATACCCTGTTACGTGAAGCT
TACGACGTTCTACATTCTGGTAATCATGACTGGGTGAACCATGTTAATGA
TATTCTTAACTATAACGGGTTTGGGCATGTATGGACAAACCCTAGACTAT
ATCAGACCGATATGTTAACCAACCAGTTACGACAACGTCTGCAGGATATA
TATATACAAGAATGGCATAGTTCTATTCAAAACAATTCAAAACTGTCCAT
TTATTCCGCCTTAAAGACAAGATATGGACAAGAAAAGTATCTCGCAAGCA
TACATAATTTTGAAATTCGTAGATCAATTACAAAGATAAGAATATGTAGC
CATAAATTGAACATTGAAGCTGGAAGGTATCGTAAAATTCCCCGTGATCA
AAGGTTTTGTCCATTCTGCCCAAATGAAATTGAAGATGAAAGTCACTTTA
TCATGAATTGTTCAAGATATAAGGATAAACGCTCAAAGCTATTCACCTTT
ATATCCGGTTGTTCAAATGAATTCAATGCGCTCCGTTCTGTCGATAGATT
CAATTACATACTAGGAGGTGATAATCCTTACTGTGTACAGATAGGTATAT
TCATCAAAGAATGTTTGGACATTAGAACAAGCAATGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000008 | genome | Sc0000008:5914456..5918341 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70785_cuf0 |
| Biotype | protein_coding |
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