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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL29963_evm0 >transcript:BL29963_evm0-protein ID=transcript:BL29963_evm0-protein|Name=transcript:BL29963_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=130bp
MLPDVLDEFKFQTGKELDTYFYAAYNTIMMLGTIIAASVITASLEISGYK
TGACSQPESVGFALRIVMSVFPIANLLLSSIFVWKHPITEATRQRTKAAL
QETRSPNLSTVSSDVTTETLGNDVDISTKT Run BLAST on NCBI mRNA from alignment at xpSc0039675:184034..186874- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL29963_evm0 ID=transcript:BL29963_evm0|Name=transcript:BL29963_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2841bp|location=Sequence derived from alignment at xpSc0039675:184034..186874- (Branchiostoma lanceolatum)
ATGTTGCCTGACGTCTTGGATGAGTTCAAGTTCCAAACGGGGAAAGAGTT
GGACACCTACTTCTATGCCGCATACAATACTATCATGATGCTTGGAACAA
TCATCGCTGCTTCGGTCATAACGGCGTCACTAGAGTAAGTACATCTAAAT
GTGCAGGGTGAATTTTGGTAATATTTAAATGCACGTATTGCAGAATGAGT
GACATTTGTGACTAATATTCAACATGTTCGCGACATTTTTCACATTTTCA
GCGAGAACGGGAAAGCAAACCGCGCGATGTTCTCTAGTTTTGGTAGCCTA
CCGAAATCTTCCCAGCAAGACAAAATGGCTGACTAACATGAACGGCAGGG
GGAAGTTGCGCATCCTTATTATTTCAAGGCGTTATCACAACACAACAAAG
TCGCATTGAACCGCTGTGAATGTCTCTATACAGTGTGAAAAGGTATATTC
AGCCTGTGATGTAGGAAATTACTAAGGTCATTTTAGGTGTTCACGAATAC
CGAGTTTCAAAACCGATTTGCCCCCCCCCCCATCATAACTTCAGAACAGC
ATCGTNAAAGCAAGCCGCGCGATGTTCTCTAGTTTTGGTAGTTTTGGCTC
ATTCGCCCCCCCCCCATCATAACTTCAGAACAGCATTGTGTATAATCACC
AAATTTGCAGAGAGTGATGTATATGTAAAGTTTTATAATTCCTACAATTT
TGGTACTATTATGACGTAATATGACGTAATTATGACGTCATTAATGTCAT
TTTTTGGCTAAAACCGTCTAAATAGGGAATTCCCGTAATATCTGATGGTG
TTAACCGATCATGTAACAAAAAAGATATTGAAGTCTGACAAGACTTCTGG
TGCCAATGGTAACTGCGCTGACGTCAAATTGACGTCATAGAATCCGCCAT
CTTGGATAGACGATCTTCAAATATAATTTTTGCTACTTAAGACCCCAAAA
CATAAAACAGACAAGAAACGTTGATTTGAATTTTTTTGTCGAAAACATAG
CAGGTATGGGTGAATTTGAAGGGAAGAAGCCTGTTTACACTTAAACTAAT
GATGTTGTCCGCCATCTTGGATTTTGACCGATGACGTCATCAAATTAGCA
TGATTTATGAATATTTAGTCCTGAAAATTACATTAGATTACATAGGGTCT
TACTAATGTAGGAAAACAAATGTGGTAGAGCAAATAAGCCTTGAAACCTC
ATTGTTTAAACCGAAATTAGTAAATTTTGTAAAATATGCTTTTCAGAAAC
ACGTTGCCATGGCAACTCAAAAAATGATTAACTTACACTTTTACAATAAA
ATTGTTGCAAACTAAATATTTGGAAAAGTCACCAAGTTTGGTAGTCCTAG
CACACGTCGTTCAGGAGTTATTTTTCCAAAGAAAGTCGTCTTCCTTGTTA
ATTACACTCATATCATAAAGCCAAGATCTAATACAATGATAAACTGAAAC
GTACAAGGAGGAGGGTCTTATAACTTGAAGGAGACTGTGGAAGGGTCATA
GAAAATGTTGATCTCAGTATCCTCAACAGCTGTAAATTTTGCCATTATCT
ATTTTGTTAATTTCCAGCCAAAATTATGTAGATCAAATATCTATAATGTA
TATATGTCTTAAGATTGTATGTCATTTTCTGTAGTTATAACTAAACCTTT
AAACTGTATGTTATTTTCCGTAATTGTAAACAGTAAGGCTGACGGGAATA
CCACGTATTACTTTGTTGCAAGCCAACTAGATAGTTAGTTTAGGTGATTT
TCTTATACGGTTAGAAGTAAATACACCGGAACTCTTATGTCTTTTAAAGG
ATCAGTGGATACAAGACAGGAGCCTGTTCCCAGCCAGAGTCTGTGGGTTT
TGCCTTACGAATCGTCATGTCCGTATTTCCCATCGCAAATCTGCTGCTAT
CTTCTATCTTCGTCTGGAAGCATCCCATCACGGAGGCTACCCGTCAACGG
ACGAAAGCGGCACTACAGGAAACTCGGTGAGAACAATTCAATTGTCCTTG
TTTGTGCGTTTGCATATTTTAATAAGTTTTTGTCTTTCATAGTGCTTTCT
GAGGTGTTCTAATTCGATATCATGGACGTTTTATAATGTAAAAACGGACA
ATTTACTTTGCGGACAGCATAGTGTTATTTAATGGTTAATTGTGGTTGGA
TGAACGGGAAGTGCAAAAGTGTATATCTTTTTAGATGTTAACAAAAGATT
GCTTACACGAAAGGGGCTTTGGAATTTCATATAAGACTACAATGCATCAC
GATTGCTCATGCGCACCTGGAACTGTGAATTGGCTTATTCTTCTTAGTGG
CTTACATGTCAGGTAGCCTATCTAATGCATTACGTTAATGAATTGTAGAC
ATTCAGGTAAACAATGTATAAGGACAATTCAACTCTTCAACTGGATAAAA
TTCGGAGACTTAATTCCGACCATTTTGAGTGACACCCATTACTATTTTTC
AGCGTCACTAACATGAACTGACAAAACGAGTTTCGAGTCAGTGTCTTTGA
CATGTTCTTCCGGTTTTCCAGCAGCATTGTATTCATTTTGGCAGTTGATT
TTAGTGACTCTGAAGAAGAGTGATTGATGTCCCTCGAAACGTCCGGAATT
AAGTCCCCGAATTTTATCCAGTTTAAGAGTTTGAATTGTCCTTATGTAAT
GTATTGTGCTTACATGAAGGTTTACCCGTTCTAGCGTGCTCTGCATCACC
ACTCTTTAAGCTTTTGTTTTTCTCGAAAACCTGACATTCTCTACTTGATG
TGTTAACAGATCACCCAACTTGTCGACCGTGAGTAGCGACGTCACGACAG
AGACACTGGGTAACGATGTCGACATCAGCACGAAAACTTAG Coding sequence (CDS) from alignment at xpSc0039675:184034..186874- >transcript:BL29963_evm0 ID=transcript:BL29963_evm0|Name=transcript:BL29963_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1179bp|location=Sequence derived from alignment at xpSc0039675:184034..186874- (Branchiostoma lanceolatum)
ATGTTGCCTGACGTCTTGGATGAGTTCAAGTTCCAAACGGGGAAAGAGTT
GGACACCTACTTCTATGCCGCATACAATACTATCATGATGCTTGGAACAA
TCATCGCTGCTTCGGTCATAACGGCGTCACTAGAGATCAGTGGATACAAG
ACAGGAGCCTGTTCCCAGCCAGAGTCTGTGGGTTTTGCCTTACGAATCGT
CATGTCCGTATTTCCCATCGCAAATCTGCTGCTATCTTCTATCTTCGTCT
GGAAGCATCCCATCACGGAGGCTACCCGTCAACGGACGAAAGCGGCACTA
CAGGAAACTCGATCACCCAACTTGTCGACCGTGAGTAGCGACGTCACGAC
AGAGACACTGGGTAACGATGTCGACATCAGCACGAAAACTTAGATGTTGC
CTGACGTCTTGGATGAGTTCAAGTTCCAAACGGGGAAAGAGTTGGACACC
TACTTCTATGCCGCATACAATACTATCATGATGCTTGGAACAATCATCGC
TGCTTCGGTCATAACGGCGTCACTAGAGATCAGTGGATACAAGACAGGAG
CCTGTTCCCAGCCAGAGTCTGTGGGTTTTGCCTTACGAATCGTCATGTCC
GTATTTCCCATCGCAAATCTGCTGCTATCTTCTATCTTCGTCTGGAAGCA
TCCCATCACGGAGGCTACCCGTCAACGGACGAAAGCGGCACTACAGGAAA
CTCGATCACCCAACTTGTCGACCGTGAGTAGCGACGTCACGACAGAGACA
CTGGGTAACGATGTCGACATCAGCACGAAAACTTAGATGTTGCCTGACGT
CTTGGATGAGTTCAAGTTCCAAACGGGGAAAGAGTTGGACACCTACTTCT
ATGCCGCATACAATACTATCATGATGCTTGGAACAATCATCGCTGCTTCG
GTCATAACGGCGTCACTAGAGATCAGTGGATACAAGACAGGAGCCTGTTC
CCAGCCAGAGTCTGTGGGTTTTGCCTTACGAATCGTCATGTCCGTATTTC
CCATCGCAAATCTGCTGCTATCTTCTATCTTCGTCTGGAAGCATCCCATC
ACGGAGGCTACCCGTCAACGGACGAAAGCGGCACTACAGGAAACTCGATC
ACCCAACTTGTCGACCGTGAGTAGCGACGTCACGACAGAGACACTGGGTA
ACGATGTCGACATCAGCACGAAAACTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039675 | genome | xpSc0039675:184034..186874 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL29963_evm0 |
| Biotype | protein_coding |
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