transcript:BL19969_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL19969_evm0
Unique Nametranscript:BL19969_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL19969_evm0

>transcript:BL19969_evm0-protein ID=transcript:BL19969_evm0-protein|Name=transcript:BL19969_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=91bp
MTESEFEELVRAVKMVPEGFDAICLVWDYNNSERNEDKEVQVFQSLHRLF
GDELYKHLVILVTHAQQEDIQEFMEKLPENMKKIANKEKLE
Run BLAST on NCBI

mRNA from alignment at Sc0000026:278596..279220+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL19969_evm0 ID=transcript:BL19969_evm0|Name=transcript:BL19969_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=625bp|location=Sequence derived from alignment at Sc0000026:278596..279220+ (Branchiostoma lanceolatum)
ATGACAGAGTCTGAGTTTGAGGAGCTGGTTCGAGCTGTGAAGATGGTTCC
TGAGGGCTTTGATGCCATCTGTCTGGTCTGGGACTACAACAACTCTGAGA
GGAATGAAGACAAGGAGGTCCAAGTGTTCCAGTCCCTCCACAGGCTGTTT
GGTGATGAACTGTACAAGCATCTTGTCATCCTGGTCACACATGCTCAGCA
GGAGGACATCCAAGAGTTTATGGAGAAACTACCAGAGAACATGAAGAAAA
TTGCTAACAAGGTAAATGGGCACTACAGAATAACTCTCATGGAAACGATT
AAGGAGACTGGTGCCAGCTGTAAGGCAGCCGTAGTTGTGCATAACCAGCA
GCAAGCTCTATCAGGATTACATCATGACCCAACAGATTCTGATCAGAGCA
AAGAAATGAAAGAAACATCTTCTTATTATTGTAAGTTTCATGAGAGGATC
ATTGCTATGGATAACAAGCTTAAAGAGCCACGTGAAGAGGTAAAACTATT
TCTGAGCCTCATTAAAGAATTGTCCAATAAAACTGGAAAATATACAGCCG
TAAATCTTTCTCCTAACTGTCAAATCCCATCCGGAGAAGATCTCTGTCTT
GTGCTTTTAGGAAAAACTGGAGTAG

Coding sequence (CDS) from alignment at Sc0000026:278596..279220+

>transcript:BL19969_evm0 ID=transcript:BL19969_evm0|Name=transcript:BL19969_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=552bp|location=Sequence derived from alignment at Sc0000026:278596..279220+ (Branchiostoma lanceolatum)
ATGACAGAGTCTGAGTTTGAGGAGCTGGTTCGAGCTGTGAAGATGGTTCC
TGAGGGCTTTGATGCCATCTGTCTGGTCTGGGACTACAACAACTCTGAGA
GGAATGAAGACAAGGAGGTCCAAGTGTTCCAGTCCCTCCACAGGCTGTTT
GGTGATGAACTGTACAAGCATCTTGTCATCCTGGTCACACATGCTCAGCA
GGAGGACATCCAAGAGTTTATGGAGAAACTACCAGAGAACATGAAGAAAA
TTGCTAACAAGGAAAAACTGGAGTAGATGACAGAGTCTGAGTTTGAGGAG
CTGGTTCGAGCTGTGAAGATGGTTCCTGAGGGCTTTGATGCCATCTGTCT
GGTCTGGGACTACAACAACTCTGAGAGGAATGAAGACAAGGAGGTCCAAG
TGTTCCAGTCCCTCCACAGGCTGTTTGGTGATGAACTGTACAAGCATCTT
GTCATCCTGGTCACACATGCTCAGCAGGAGGACATCCAAGAGTTTATGGA
GAAACTACCAGAGAACATGAAGAAAATTGCTAACAAGGAAAAACTGGAGT
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL19969gene:BL19969Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL19969_evm0-E1BL19969_evm0-E1-1564476830-163458Branchiostoma lanceolatumexon
BL19969_evm0-E2BL19969_evm0-E2-1564476830-163460Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL19969_evm0transcript:BL19969_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:278596..279220 +
Properties
Property NameValue
Transcript idBL19969_evm0
Biotypeprotein_coding