transcript:BL11138_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL11138_evm0
Unique Nametranscript:BL11138_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL11138_evm0

>transcript:BL11138_evm0-protein ID=transcript:BL11138_evm0-protein|Name=transcript:BL11138_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MSCNKVYIGETGRTFGCRLEEHRKEAESTKVGRYTRAQKQVAEKEENKSA
VTDHIMRNNCAIDWDGAKVIDREDNRVTRWIKESVWIRKSAPVMNRDEGG
YRLSHVWDRILKK
Run BLAST on NCBI

mRNA from alignment at Sc0000217:136591..137297+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL11138_evm0 ID=transcript:BL11138_evm0|Name=transcript:BL11138_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=707bp|location=Sequence derived from alignment at Sc0000217:136591..137297+ (Branchiostoma lanceolatum)
CACAACATTGCCACAGCAGTCAGACCCAAAACCACGCTAAGAAACCTACT
GGTGCATCCCAAAGACAAACTACAAGACTCAGTAAAGACGGACTGTGTAT
ACAAGATACCTTGCATGAGTTGCAACAAGGTATACATAGGGGAGACAGGG
AGAACATTTGGATGCAGACTGGAAGAACACAGGAAAGAAGCTGAGAGCAC
CAAGGTGGGAAGGTACACCAGAGCACAGAAGCAGGTAGCTGAGAAGGAAG
AGAACAAATCAGCAGTGACAGACCACATCATGAGAAACAACTGTGCTATA
GACTGGGATGGGGCCAAGGTGATAGACCGAGAGGACAATAGAGTAACACG
TTGGATTAAGGAGTCTGTATGGATCAGGAAATCCGCTCCAGTCATGAACC
GTGATGAGGGGGGATATAGACTCAGTCACGTTTGGGACCGCATCCTAAAG
AAATAATCGTTGCATTGTTTGTTGATCGATATGTAGTTGTGTATGTGTTA
CACTTCTGTACGTTTGGGACCGCATAGTGATGTCATCCCCTGTGTTTGTA
CATATGTAAATATTTTGCGTTTGCATCTCATTAATATGTATAAGCAGCAA
CACCTGTGCTGCATTGCTATGTGAACCAGTCAGAATTGCCTTGAAGAAGG
TGACAGAGGGTCACCGAAACGTCGGTTGAATAAATCCCTTGGTTGTGTAA
AAAGAGT

Coding sequence (CDS) from alignment at Sc0000217:136591..137297+

>transcript:BL11138_evm0 ID=transcript:BL11138_evm0|Name=transcript:BL11138_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at Sc0000217:136591..137297+ (Branchiostoma lanceolatum)
ATGAGTTGCAACAAGGTATACATAGGGGAGACAGGGAGAACATTTGGATG
CAGACTGGAAGAACACAGGAAAGAAGCTGAGAGCACCAAGGTGGGAAGGT
ACACCAGAGCACAGAAGCAGGTAGCTGAGAAGGAAGAGAACAAATCAGCA
GTGACAGACCACATCATGAGAAACAACTGTGCTATAGACTGGGATGGGGC
CAAGGTGATAGACCGAGAGGACAATAGAGTAACACGTTGGATTAAGGAGT
CTGTATGGATCAGGAAATCCGCTCCAGTCATGAACCGTGATGAGGGGGGA
TATAGACTCAGTCACGTTTGGGACCGCATCCTAAAGAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL11138gene:BL11138Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL11138_evm0-E1BL11138_evm0-E1-1564476830-393464Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL11138_evm0transcript:BL11138_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000217genomeSc0000217:136591..137297 +
Properties
Property NameValue
Transcript idBL11138_evm0
Biotypeprotein_coding