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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000487:72571..80644- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01952.1 ID=Blg01952.1|Name=Blg01952.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8074bp|location=Sequence derived from alignment at Sc0000487:72571..80644- (Branchiostoma lanceolatum)
CAGGTGGCCCCATGAGGTTGGCATGACCTTTATCATCATCAACATGGCTG
CCCCGGTAGACGTTCCGAGCCCGTACAGGGGTGTTTCGGCCCCGTATCGC
ACGATACTCGGCATCGACCTCGGCACAACGTCCGTGAAAGTCTCCCTAGT
GGACATGGACTCCTCCACGACCATTTTTTCCACGAGTCAGGAGACCGGAG
CGACGGTAGGCTTCCCTACAGACCCGCGGGGTGACGAACAAGATGTCGCC
AAGATCCTGACCTGTGTACAGGACTGTGTGGAGAAGATTCCGGAGGAGCT
CGTTGCGGGGGTGACACGCATCGGGGTGACCGGGCAGATGCACGGGGTGA
TGCTGTGGAGGGCCCGGGAGGGCTGGCGCTACTCCCCGATGTCTCACCGC
TTCGAGACGGGGAAGGTTAGCCACCTCTACACCTGGCAAGATGGCCGCTG
CACCCCCGAGTTCCTCCAAACCATCCCCTCCCCCCGCGCGCACCTACCCG
TTGCTACTGGTAACATTTCAGTTTAATTTCTTCTTCATATATTTATTCGC
ACAAATTGCAAAATTTACAGAAAGGTAACGAAATATATAAAAGAAATGCA
ATGTGCAGGAGAAAGGGGAGAAGCCTACCTCCTTCAAACTTAACAAATAT
TGTTTATTGTTTAAAAGATCTCCATTAGTGACAGTATAAATCTGTACCTC
ACTACATGAAATAATCGTAAAATTGATTAAGAGAAATAAAGATGTGACAA
ACGAAAAATACAGCTCAATGGGTAAGCAAAAGCCAAATTCACTATTGGCC
AAAGTATCACAGGACAGGAAAAGTAATATACTAGAAATTAACACAGCTGA
ATTATTACACACATGAAAAAACATACTATTAGGTGTATGCATAACCATAA
TGTAATACATATTCAATATATAGGAATACGCAAAATAGGAATACGCAACA
AATGATCAAAATACATTTACATTAGTTGAAAATGCTTTTAGGTAACGGCT
GTGCGACGCTGCTGTGGCTGGCCAGGCACATGCCTGAGGCTCTGGAGGGG
TTTGACCGGGCGGGGACAGTGATGGACTACCTGGTGGCGATGTTGTGCGG
GATGGAGCTACCGGTGATGTCCATACAGAACGCCGCCAGCTGGGGGTACT
TTGACTGTGGCAGCAGGCTCTGGAACAGGGAAATGTAAGGACCTCTTGAA
ATATGAAAATGCAACTTTGCAGTTGTGCTTTTATTGATCATTTTAAAAAA
AAACTGGGAGGAGACCTTGGAACATTGGGGAAACGTACAAAAAGTGAAAC
ACTGGCTTTAAAAGTTTAATGAGAAAGAGTAAATATATATTATAATATAA
AGAAGGGACTTTTAAAGAAGGCAAGATTTTTATGATCTTACTCCATATGG
TACGTCAATGACTAAACCATTTATTTTTGTTAAGGCCACAGTAAGTAAAT
TTTATGGATGACATCCTCCGCGGACTCCAAAATTAATGAGATAGGGCACA
AAAAAAACAAGGCGGGCAAAAAAAAACAAGATTCTTATGTTTTCAAATTT
CGAGATCATAAATCTTGTTTAACAAGAATTGAGGCGACAAAATATGATAT
CATGACCGACAGGTCTTTTATTCCTGTATTCAACCAATGAGGTTCATATA
TAATATAAAACCTCCGTGATTTAATGTAAACATGTCCTTGTAGATGTGTA
TACATCTCAATAGACAAACTACAACAAATGCAGAAAAGAGCTTGTTATAC
CATCATCTGAAGCAACTACACTGGGTATTCATATGCGATGAAACACCTTG
TGTATACAGCTAAATTAACTAGAACCCCCCCCCCCCCATTATTTATATTA
TTTATATAATGTCCTTGCTAGAACAAATGCAGAAAACAGCTTGTTATTAT
ACCATCATGAGCAGGACCCACACTGGGTATTCATATGCAACGAAACACCT
TAGACTGTCAACATTAAACTGTTCTTAAAAGATGTGTATACAGTTCAATT
AACTAGAACAAAAGCAGAAAAAAGCTTGTCATACCATCATAGGCAGGAAC
TACACTGGGTATTCATATGCAATGAAACACCTTAGACTGTCAACGTTTAC
GACATATTTGCCCATTTTTGGCATGTTGACCACCGTCGGAGGGCAATGAA
ATTTCTTGTTTTTTATTTCGAAATCAGGGGAAAATTAATGAGCGCGCTGA
TGTCATCCATAAAAATTACTTGTTGTGGCCTAAGCAAGAACTACAGTGAA
ATACATGGACCAAAAAGACAACTTTGGTGCATACTGCATTGAACAGGTTG
TCACACTAAAGCCCTGCAGATTCTAACTTCAACATTCATTTGCATTCATC
AAATCAAGATGTCCCTGTTGCTTTTGATCATAAATGACTAAGCAATCTAA
TGCACTATGCTTATGGCAATAATGTCCATTTCCTTCTCCCCAGTCTGGAG
GAGGCAGGTTTCCCGTGTGATGTCCTGCCCAGAGTGCTGGACCCGGGGGA
GGTGGCTGGGACCCTGCGGCAGCCCTGGTGCTGCGTGCCGCCTCGCATCG
ACGTGGGCGTGGCCCTGGGGGACCTCCAGTGTTCCGTACTCCCCAGTCTA
GTACAGAGGGGAGACGCAGGTGTGTTTCTAAAAAAAGGAAGGAGGTGTTT
TTTTTTGGTGTGTCTGGATGTTGTTGTTTTTATCTCCATGAAAAATAGAG
ATATAGTTTTTGGCCTGTCTGTGTTCTTGTTTCCGAATTTTTGTATATAG
TTAGCATAATTTACTCAAGAACCTCTGATGATGTATGTGGGTAGGTGTTG
GGTAGACCTGAGCGTGGCCTTGGGGGATCTTCAGTTCTCCGTACTCCCAA
GTCTGGTACAGACTGAGGAGACCTAGGTGTGTTTCTGAAAACTTAAGAGG
ATTTTTTTGTAGTCAGCATAACTCAAGAACCTCTGGATGGATTATGATGA
TATTTTGTATGTGGGTAGGTGTTGGGAAGAGTTGGGCATGGCACTGGGGG
ATCTCCAGTGTTCCGTACTCCCCAGTCTGGTACAGAGGGGAGATGCAGGT
GTGTTGCTGAAAGCTTAAGAGTCTTTATTTTTGTAGTCAGCATAACTCAA
GAACCTCTAGATGGATTACGATGATATTTTGTATGTGGGTAGGTGTAGAA
GGTGTTAGAAAGAGTTGGGCATGGCACTGGGGGATCTCCAGTGTTTCGTA
CTCCCAAGTTTGGTACAGAGGGGAGATGTAGATGTGTCTTCCAAAACTGA
GTCTGGATTTTATTTTTTTTTGCCTTTGTGTAAGGGGGTTATGTTTTCGG
TGTTTCTGGATGATGTTTTTACCTACCAGTACAATAGCAGGATGTGAGTA
GGAAGATGGTGTCACCGCAAAGGTCAGACAAGTAATCAATCAGGCATGAC
AGACATTTGGTTAATTGAAGAGGCTACTAAGTCACTGGAAGGTATTGTAT
TTGTCAGTCTATTTGTCAGTGTTTTCACAGTTACATGTATATGTATTTTC
CATATGCTGGTCACATTCACTGGAGTGACAGGAAGGAATCAATGAAACAC
ATGTAATGTTAATCTAAACCTTATTTGCTTAGTTAATGAACTACAATTAA
ATAAGACATACAAGAACCCACAGAGACATAAGATCTTCAAACTTTTGTAT
TGAGTTATAAGTACAATACTAGTACTGTTGCCTGACTGATACCCAATGTT
CTATGGGCTCTGGTTTTCAACAACATCTATTCAGACAAATGTTGTAGGCA
TCGGGACCAGTTAGACAACACAGTGGTAGCCGCAAACTAGTCACTAATGA
GCCATTTACGGGATATGGTGTCAAGATGCCACCTGAGGAACCTGGAATTG
AAGCTATGTTGTTTAATTGGATCAGGCTTTTCTGACAACAGCTCTACAGC
TCAAAGATTTGAGGTGAGCTGTTATGGCTACCACCAAGCTTCAGTTCAGC
AGATGCTTTCTGAAATGTCAGACTGTTCCAAGATTTTACACAGTTGCTTG
AGTACTAGTAACTGTCATTTGGCATATCTTATTACCTGGATGTCTATACT
TCGTTGACTGACAGTCCAGTTTTACGCAACTTTGTACCTAGCTAGTGTAC
AGAACTGGTGTGTAACACCTAAAGGTGGTGTACCAGTTTTGTGAAACAAA
CAAAGAAACAAACTCAACATTATACCCTTATTAAGGTAGCTGTCTAGTAG
CTGAAACAGCAGCAGGTACAAAACATTGTTTGTGTCAGACAGAAATTTCA
CTAAGTATTAAAAAAAATGCCCAAAATAGTTACTCTTGAGCAACTGGATA
AAATTTTGAAACAGCATCAGTGACTAAAGACAGCGAATGCTGCCTGAAAC
GTCTGACTGTTTCAAAATTTTATCCAGTTGCTTGAGTACCTATTTTTGGT
GTATCTTATTACCTGGATGTCTAACCTTCATCAACGTATTCAAAAAAACC
CTTTATTTTCTCCAGTCCTTAACATAGGTACATCAGCCCAGCTGGCCTTC
CAGATGACCGGGGGGTTCCTGCCCCCTCCTGCCGACCCCTCCTCCCCGGT
ACAGTACTACCCGTACTTCAGGGGGCAGTACCTGGCCGTGGCCGCAGCGC
TGACCGGGGGGAACGCCCTGGCCTGCTTCGTCAAGATGATACAGAGCTGG
CTGCAGGACCTGGGTAAGGCTGGGGTATGACAGGGTCACATTTCGAAACC
GGAGCCCTGCCAGGCTGTTTGTGGGAAGAAATAATCAAATCATGACTGAT
TTTTCCGTTTTGTGTGTTTTGTCGTCTTTTATATCATACTTTTTATTCCT
GCAAACTGTTCCGGCCGAGCACAGGTTTGGAATTGTAACCCTTAGGCTAG
TAGCACATGGCTAAAGCTTAGAGCAAGGAGGTTTAAAACCTTGTTGGTTA
GAGCTGTATTCAGCCATGACTTGTCTTGATTTTCTGAACAGATTATCTAG
ATTACGGTTGACTTTGTGTTGCTCAAGCTAGAGACAACTCCCCCCAGGTA
GAAGTTATAGTTGCTTACTATAGATATAAGTATACCTATCATTTTTCTAA
ATTCTATGTCTGTAAGTTATGTAGTGTTTTGTGCCTTGAAAGATGAGAGG
AAAGTTGTGTCAATGAAACATGTCAATATATTATGAGAACAGCCGTATCA
TTTTTCTGAAGACTGCACAAACAAAAGTAAAGGGAAACAGGGTCTTTGGA
GGTCATGAAGTAGTTTTGTCTCAACAGAATAGCTATTTGAATGGCAATCT
CCTGTGATACTGACATTGTTAAAAGTGTAATGTACAAGAAGACCTTAGTT
GCCATTAATCCTAAGTCCCTTCCAATCCACAGGAATCCCCTCCATACAGG
AGGACTTGCTGTATGAACGTCTTCTGGCCTCGGCCCAAACATCTGACGAC
ACCCCCCTCACCATCATCCCCACCATATTCGGCGAGCGACACATCCCAGA
CCAGCGGGCATCCGCGTCCAACATCACGATCGACAGTCTCAGCGTTGGCC
AGGTCACGCGCTCGCTCTGCAAGGGCGTCGCTGACAACCTTCACGCCATG
ATGCCGCGAGAGTTCCTCACGGAGTGTGGCGTGCAGAGGATTGTGGGTAC
GGGAAGTGCCCTCACGAGAAACGGGATCCTACAGGAAGAGTTAGAGAGGG
CGTACGACATCCCCCTGGTGTATACTAAGACCACCTGCGGGGATGCTGCA
TATGGAGCGGCGTTTGCCATGTTGTTGGAGATGCAGAAAAGATGAAGAAA
ATAATGACCTCGCTCCTGAGGTGTCACAAAAAAAAGCACTCCACAGCCTT
CATAGCAAAGCCTTCATAGCACAGGCTCTATGGCTGGTTTCTATGTCACT
GTTTTTGCTGGTCATGTACACTTATTTTCTGCATTCTGTTTTGATAGCTC
CCATTTTCGAAAAATTTTATATGAAAACAGTATGTTATTAGCAAAAATGC
CAATTGTAAAGTGCTTTTCAAAGAGCCTGCTATGGTGGCTTGGTTGTTTT
CATGTACAAGTGTGATTAGGATTGCTGTATGATGCAGTATAAGCCATCAA
ATTAATGTTACCTCCTTATTCCAGAATAGCCATATTATTCCCATATATTA
TAACATATGCCAATACTGTAAGGACCCTATCTTAATGGAGGTTTCGATTT
CGGAGTGTGTGTCTGTCGTTAATGCAGTAGAGTGGTTGGTGTCCATTTGC
TACATGTAGCCACATCTAGGACACTGACAGAAAGTTAGGTCAAAAGTCCC
AGAATAGCTAGGTTACATGTGGATCTCATCCCATGTCTTCAATTGCATCC
TATAACTACGGTATGTCTGTTGTCTTATGAGAGCCAGTGGGAAAATATTA
GACGGAATCAGAAAGACAAGACAAGAAATTCACAAACCTAGAAATATTTC
ATGGCCGTATGAGATCTTTGATTTCATGTTATCGTTGTGCTTCGTTGCAT
TTTGTGTAAGTAGTTGATAAGGAATCTGGATTGCAGAAGTTTGTTTAAGA
TTTTATTCTGATTTATTGATGAAGTTGCCAAAATGCTGCTATGGTGTTCA
TTGAATTGAAATGTAAATACTCAATAATTGGTCCAGTCTTTGAAATCTAA
AGCCATGTATTTTAGAGAGAAGTATTTGGCATTTGAGAAGTGTCATATTT
CATTAGCTCTAATATCTCTGATGTATGCTTGTGAGGTTTTAATATGCAGA
TGAGTTGCTATTTTTGCTAATTGTGGGAATTAGGCTAAAGCCAGTATGAT
TCAAAGTGTTTTAATGCACAGAGTGCAGAATATGTCGGACAATTTGTAAT
GCTGTGACGTGCCAGGTTGTTGTTTAAAAGTGCCATCCACATTTTTAATT
TGAAATGAAAAGAATATTTACAAACAGATTATTATATTTCTGATAGATAT
AGTACCAAGTGTGGGTCTGCGTGTCTTTTTTGTTTTTTTTTGTTTTTTGT
TTGTTTGTTTGTTGAAAAAGTCAAACTGTGAAAGTTGTTTTGCATATAGG
ATTTTGGATTTATTCATAAAATTGAACTGGTGACTTACATTTCTATCAAA
CGTACACCTCTTAAAATAACCAATTGCAAAGTTAGGCAGGCTTGGCGTTG
TACCTAACCCGACAAGCTGTTAGGCGGTAACTGAGTTAGGCAGAAGTTCT
GGGCAATATGGTCACCAGTTTCTAGCAGCGGTCCTCCAATGAGTTAGGCA
CATTATATTATGGTCGCATGGAGTCATCAGAGCTATTATGCCGTCCGATT
AATTTGATGTACCTTAATGTCTTCTTCATTACTGTCATTACGTCGACCTG
TTGCATCTGTTAAGTACTGAATTCCTGAAACAGCCACTGTCGCGGGATAG
TTAACCTGGCATTCAGTCTACCATGGTTTGGCCGGGCTCTCTTCGTGGTC
GGCCAATTAAACTCCTATCACGTAAAACTATTACCGTCCGGATACGTGTG
CCAAATATTACCCCGACGGCAGAGTGCCCCGAAGAGGCTAGTGCCTGACC
GAACCACGTGCACGGTAGACTAGATGCCAATTTAGGGGGATGTTTATTCG
TTTTGCTTACAAGGCTACTTCTGAACCCCTAGAGCTGGCATGTTATCAGG
GCTATTTCATTACTACTTTGTTTAAAAAACAGAATTAAGGGGCGCACAAA
ATCATAATAATAGGAAATATTTCCATCCCTTTATTTTACGAAAGCATCTG
GTATAGTCTCCCCTCCTCGTACTAAAAACCAATGCCAGGTTTCAGTTCCC
ATCTTTTTTAGGAAGTCGTGTTTCAGGTCTTGTATCTGCTACTGTTATAT
GTTGTATGAATGGGAAACAAGAAGAAACGATGATACTTTTCTAATTAATA
TCTACATCAAAACAATCCTGCAACTGAAGGGGGAATATACAGGGACAAAC
TCGTGAATTTGACAAAACCTCGCATATTTTTATTCACTCGTATTTACTCG
TATACATCGAAGCATCAAAGATCATGTCAGACTTTGAAGACATTATGAGT
GCTTTAATTGTATCTATGATATTGAACTTAAATCTATAGCTAATACACAA
TGTAGAATAAACTGTACAACAGAA Coding sequence (CDS) from alignment at Sc0000487:72571..80644- >Blg01952.1 ID=Blg01952.1|Name=Blg01952.1|organism=Branchiostoma lanceolatum|type=CDS|length=1467bp|location=Sequence derived from alignment at Sc0000487:72571..80644- (Branchiostoma lanceolatum)
ATGACCTTTATCATCATCAACATGGCTGCCCCGGTAGACGTTCCGAGCCC
GTACAGGGGTGTTTCGGCCCCGTATCGCACGATACTCGGCATCGACCTCG
GCACAACGTCCGTGAAAGTCTCCCTAGTGGACATGGACTCCTCCACGACC
ATTTTTTCCACGAGTCAGGAGACCGGAGCGACGGTAGGCTTCCCTACAGA
CCCGCGGGGTGACGAACAAGATGTCGCCAAGATCCTGACCTGTGTACAGG
ACTGTGTGGAGAAGATTCCGGAGGAGCTCGTTGCGGGGGTGACACGCATC
GGGGTGACCGGGCAGATGCACGGGGTGATGCTGTGGAGGGCCCGGGAGGG
CTGGCGCTACTCCCCGATGTCTCACCGCTTCGAGACGGGGAAGGTTAGCC
ACCTCTACACCTGGCAAGATGGCCGCTGCACCCCCGAGTTCCTCCAAACC
ATCCCCTCCCCCCGCGCGCACCTACCCGTTGCTACTGGTAACGGCTGTGC
GACGCTGCTGTGGCTGGCCAGGCACATGCCTGAGGCTCTGGAGGGGTTTG
ACCGGGCGGGGACAGTGATGGACTACCTGGTGGCGATGTTGTGCGGGATG
GAGCTACCGGTGATGTCCATACAGAACGCCGCCAGCTGGGGGTACTTTGA
CTGTGGCAGCAGGCTCTGGAACAGGGAAATTCTGGAGGAGGCAGGTTTCC
CGTGTGATGTCCTGCCCAGAGTGCTGGACCCGGGGGAGGTGGCTGGGACC
CTGCGGCAGCCCTGGTGCTGCGTGCCGCCTCGCATCGACGTGGGCGTGGC
CCTGGGGGACCTCCAGTGTTCCGTACTCCCCAGTCTAGTACAGAGGGGAG
ACGCAGTCCTTAACATAGGTACATCAGCCCAGCTGGCCTTCCAGATGACC
GGGGGGTTCCTGCCCCCTCCTGCCGACCCCTCCTCCCCGGTACAGTACTA
CCCGTACTTCAGGGGGCAGTACCTGGCCGTGGCCGCAGCGCTGACCGGGG
GGAACGCCCTGGCCTGCTTCGTCAAGATGATACAGAGCTGGCTGCAGGAC
CTGGGAATCCCCTCCATACAGGAGGACTTGCTGTATGAACGTCTTCTGGC
CTCGGCCCAAACATCTGACGACACCCCCCTCACCATCATCCCCACCATAT
TCGGCGAGCGACACATCCCAGACCAGCGGGCATCCGCGTCCAACATCACG
ATCGACAGTCTCAGCGTTGGCCAGGTCACGCGCTCGCTCTGCAAGGGCGT
CGCTGACAACCTTCACGCCATGATGCCGCGAGAGTTCCTCACGGAGTGTG
GCGTGCAGAGGATTGTGGGTACGGGAAGTGCCCTCACGAGAAACGGGATC
CTACAGGAAGAGTTAGAGAGGGCGTACGACATCCCCCTGGTGTATACTAA
GACCACCTGCGGGGATGCTGCATATGGAGCGGCGTTTGCCATGTTGTTGG
AGATGCAGAAAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01952.1-exon-Sc0000487-1570713199:80136..80644 | Blg01952.1-exon-Sc0000487-1570713199:80136..80644 | Branchiostoma lanceolatum | exon |
| Blg01952.1-exon-Sc0000487-1570713199:79461..79653 | Blg01952.1-exon-Sc0000487-1570713199:79461..79653 | Branchiostoma lanceolatum | exon |
| Blg01952.1-exon-Sc0000487-1570713199:78026..78201 | Blg01952.1-exon-Sc0000487-1570713199:78026..78201 | Branchiostoma lanceolatum | exon |
| Blg01952.1-exon-Sc0000487-1570713199:75982..76179 | Blg01952.1-exon-Sc0000487-1570713199:75982..76179 | Branchiostoma lanceolatum | exon |
| Blg01952.1-exon-Sc0000487-1570713199:72571..75312 | Blg01952.1-exon-Sc0000487-1570713199:72571..75312 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000487 | genome | Sc0000487:72571..80644 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01952 |
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