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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000487:72571..80672- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01952.0 ID=Blg01952.0|Name=Blg01952.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8102bp|location=Sequence derived from alignment at Sc0000487:72571..80672- (Branchiostoma lanceolatum)
CAGGTGCTCTGAACAGGTGCCAAAGGAACAGGTGGCCCCATGAGGTTGGC
ATGACCTTTATCATCATCAACATGGCTGCCCCGGTAGACGTTCCGAGCCC
GTACAGGGGTGTTTCGGCCCCGTATCGCACGATACTCGGCATCGACCTCG
GCACAACGTCCGTGAAAGTCTCCCTAGTGGACATGGACTCCTCCACGACC
ATTTTTTCCACGAGTCAGGAGACCGGAGCGACGGTAGGCTTCCCTACAGA
CCCGCGGGGTGACGAACAAGATGTCGCCAAGATCCTGACCTGTGTACAGG
ACTGTGTGGAGAAGATTCCGGAGGAGCTCGTTGCGGGGGTGACACGCATC
GGGGTGACCGGGCAGATGCACGGGGTGATGCTGTGGAGGGCCCGGGAGGG
CTGGCGCTACTCCCCGATGTCTCACCGCTTCGAGACGGGGAAGGTTAGCC
ACCTCTACACCTGGCAAGATGGCCGCTGCACCCCCGAGTTCCTCCAAACC
ATCCCCTCCCCCCGCGCGCACCTACCCGTTGCTACTGGTAACATTTCAGT
TTAATTTCTTCTTCATATATTTATTCGCACAAATTGCAAAATTTACAGAA
AGGTAACGAAATATATAAAAGAAATGCAATGTGCAGGAGAAAGGGGAGAA
GCCTACCTCCTTCAAACTTAACAAATATTGTTTATTGTTTAAAAGATCTC
CATTAGTGACAGTATAAATCTGTACCTCACTACATGAAATAATCGTAAAA
TTGATTAAGAGAAATAAAGATGTGACAAACGAAAAATACAGCTCAATGGG
TAAGCAAAAGCCAAATTCACTATTGGCCAAAGTATCACAGGACAGGAAAA
GTAATATACTAGAAATTAACACAGCTGAATTATTACACACATGAAAAAAC
ATACTATTAGGTGTATGCATAACCATAATGTAATACATATTCAATATATA
GGAATACGCAAAATAGGAATACGCAACAAATGATCAAAATACATTTACAT
TAGTTGAAAATGCTTTTAGGTAACGGCTGTGCGACGCTGCTGTGGCTGGC
CAGGCACATGCCTGAGGCTCTGGAGGGGTTTGACCGGGCGGGGACAGTGA
TGGACTACCTGGTGGCGATGTTGTGCGGGATGGAGCTACCGGTGATGTCC
ATACAGAACGCCGCCAGCTGGGGGTACTTTGACTGTGGCAGCAGGCTCTG
GAACAGGGAAATGTAAGGACCTCTTGAAATATGAAAATGCAACTTTGCAG
TTGTGCTTTTATTGATCATTTTAAAAAAAAACTGGGAGGAGACCTTGGAA
CATTGGGGAAACGTACAAAAAGTGAAACACTGGCTTTAAAAGTTTAATGA
GAAAGAGTAAATATATATTATAATATAAAGAAGGGACTTTTAAAGAAGGC
AAGATTTTTATGATCTTACTCCATATGGTACGTCAATGACTAAACCATTT
ATTTTTGTTAAGGCCACAGTAAGTAAATTTTATGGATGACATCCTCCGCG
GACTCCAAAATTAATGAGATAGGGCACAAAAAAAACAAGGCGGGCAAAAA
AAAACAAGATTCTTATGTTTTCAAATTTCGAGATCATAAATCTTGTTTAA
CAAGAATTGAGGCGACAAAATATGATATCATGACCGACAGGTCTTTTATT
CCTGTATTCAACCAATGAGGTTCATATATAATATAAAACCTCCGTGATTT
AATGTAAACATGTCCTTGTAGATGTGTATACATCTCAATAGACAAACTAC
AACAAATGCAGAAAAGAGCTTGTTATACCATCATCTGAAGCAACTACACT
GGGTATTCATATGCGATGAAACACCTTGTGTATACAGCTAAATTAACTAG
AACCCCCCCCCCCCCATTATTTATATTATTTATATAATGTCCTTGCTAGA
ACAAATGCAGAAAACAGCTTGTTATTATACCATCATGAGCAGGACCCACA
CTGGGTATTCATATGCAACGAAACACCTTAGACTGTCAACATTAAACTGT
TCTTAAAAGATGTGTATACAGTTCAATTAACTAGAACAAAAGCAGAAAAA
AGCTTGTCATACCATCATAGGCAGGAACTACACTGGGTATTCATATGCAA
TGAAACACCTTAGACTGTCAACGTTTACGACATATTTGCCCATTTTTGGC
ATGTTGACCACCGTCGGAGGGCAATGAAATTTCTTGTTTTTTATTTCGAA
ATCAGGGGAAAATTAATGAGCGCGCTGATGTCATCCATAAAAATTACTTG
TTGTGGCCTAAGCAAGAACTACAGTGAAATACATGGACCAAAAAGACAAC
TTTGGTGCATACTGCATTGAACAGGTTGTCACACTAAAGCCCTGCAGATT
CTAACTTCAACATTCATTTGCATTCATCAAATCAAGATGTCCCTGTTGCT
TTTGATCATAAATGACTAAGCAATCTAATGCACTATGCTTATGGCAATAA
TGTCCATTTCCTTCTCCCCAGTCTGGAGGAGGCAGGTTTCCCGTGTGATG
TCCTGCCCAGAGTGCTGGACCCGGGGGAGGTGGCTGGGACCCTGCGGCAG
CCCTGGTGCTGCGTGCCGCCTCGCATCGACGTGGGCGTGGCCCTGGGGGA
CCTCCAGTGTTCCGTACTCCCCAGTCTAGTACAGAGGGGAGACGCAGGTG
TGTTTCTAAAAAAAGGAAGGAGGTGTTTTTTTTTGGTGTGTCTGGATGTT
GTTGTTTTTATCTCCATGAAAAATAGAGATATAGTTTTTGGCCTGTCTGT
GTTCTTGTTTCCGAATTTTTGTATATAGTTAGCATAATTTACTCAAGAAC
CTCTGATGATGTATGTGGGTAGGTGTTGGGTAGACCTGAGCGTGGCCTTG
GGGGATCTTCAGTTCTCCGTACTCCCAAGTCTGGTACAGACTGAGGAGAC
CTAGGTGTGTTTCTGAAAACTTAAGAGGATTTTTTTGTAGTCAGCATAAC
TCAAGAACCTCTGGATGGATTATGATGATATTTTGTATGTGGGTAGGTGT
TGGGAAGAGTTGGGCATGGCACTGGGGGATCTCCAGTGTTCCGTACTCCC
CAGTCTGGTACAGAGGGGAGATGCAGGTGTGTTGCTGAAAGCTTAAGAGT
CTTTATTTTTGTAGTCAGCATAACTCAAGAACCTCTAGATGGATTACGAT
GATATTTTGTATGTGGGTAGGTGTAGAAGGTGTTAGAAAGAGTTGGGCAT
GGCACTGGGGGATCTCCAGTGTTTCGTACTCCCAAGTTTGGTACAGAGGG
GAGATGTAGATGTGTCTTCCAAAACTGAGTCTGGATTTTATTTTTTTTTG
CCTTTGTGTAAGGGGGTTATGTTTTCGGTGTTTCTGGATGATGTTTTTAC
CTACCAGTACAATAGCAGGATGTGAGTAGGAAGATGGTGTCACCGCAAAG
GTCAGACAAGTAATCAATCAGGCATGACAGACATTTGGTTAATTGAAGAG
GCTACTAAGTCACTGGAAGGTATTGTATTTGTCAGTCTATTTGTCAGTGT
TTTCACAGTTACATGTATATGTATTTTCCATATGCTGGTCACATTCACTG
GAGTGACAGGAAGGAATCAATGAAACACATGTAATGTTAATCTAAACCTT
ATTTGCTTAGTTAATGAACTACAATTAAATAAGACATACAAGAACCCACA
GAGACATAAGATCTTCAAACTTTTGTATTGAGTTATAAGTACAATACTAG
TACTGTTGCCTGACTGATACCCAATGTTCTATGGGCTCTGGTTTTCAACA
ACATCTATTCAGACAAATGTTGTAGGCATCGGGACCAGTTAGACAACACA
GTGGTAGCCGCAAACTAGTCACTAATGAGCCATTTACGGGATATGGTGTC
AAGATGCCACCTGAGGAACCTGGAATTGAAGCTATGTTGTTTAATTGGAT
CAGGCTTTTCTGACAACAGCTCTACAGCTCAAAGATTTGAGGTGAGCTGT
TATGGCTACCACCAAGCTTCAGTTCAGCAGATGCTTTCTGAAATGTCAGA
CTGTTCCAAGATTTTACACAGTTGCTTGAGTACTAGTAACTGTCATTTGG
CATATCTTATTACCTGGATGTCTATACTTCGTTGACTGACAGTCCAGTTT
TACGCAACTTTGTACCTAGCTAGTGTACAGAACTGGTGTGTAACACCTAA
AGGTGGTGTACCAGTTTTGTGAAACAAACAAAGAAACAAACTCAACATTA
TACCCTTATTAAGGTAGCTGTCTAGTAGCTGAAACAGCAGCAGGTACAAA
ACATTGTTTGTGTCAGACAGAAATTTCACTAAGTATTAAAAAAAATGCCC
AAAATAGTTACTCTTGAGCAACTGGATAAAATTTTGAAACAGCATCAGTG
ACTAAAGACAGCGAATGCTGCCTGAAACGTCTGACTGTTTCAAAATTTTA
TCCAGTTGCTTGAGTACCTATTTTTGGTGTATCTTATTACCTGGATGTCT
AACCTTCATCAACGTATTCAAAAAAACCCTTTATTTTCTCCAGTCCTTAA
CATAGGTACATCAGCCCAGCTGGCCTTCCAGATGACCGGGGGGTTCCTGC
CCCCTCCTGCCGACCCCTCCTCCCCGGTACAGTACTACCCGTACTTCAGG
GGGCAGTACCTGGCCGTGGCCGCAGCGCTGACCGGGGGGAACGCCCTGGC
CTGCTTCGTCAAGATGATACAGAGCTGGCTGCAGGACCTGGGTAAGGCTG
GGGTATGACAGGGTCACATTTCGAAACCGGAGCCCTGCCAGGCTGTTTGT
GGGAAGAAATAATCAAATCATGACTGATTTTTCCGTTTTGTGTGTTTTGT
CGTCTTTTATATCATACTTTTTATTCCTGCAAACTGTTCCGGCCGAGCAC
AGGTTTGGAATTGTAACCCTTAGGCTAGTAGCACATGGCTAAAGCTTAGA
GCAAGGAGGTTTAAAACCTTGTTGGTTAGAGCTGTATTCAGCCATGACTT
GTCTTGATTTTCTGAACAGATTATCTAGATTACGGTTGACTTTGTGTTGC
TCAAGCTAGAGACAACTCCCCCCAGGTAGAAGTTATAGTTGCTTACTATA
GATATAAGTATACCTATCATTTTTCTAAATTCTATGTCTGTAAGTTATGT
AGTGTTTTGTGCCTTGAAAGATGAGAGGAAAGTTGTGTCAATGAAACATG
TCAATATATTATGAGAACAGCCGTATCATTTTTCTGAAGACTGCACAAAC
AAAAGTAAAGGGAAACAGGGTCTTTGGAGGTCATGAAGTAGTTTTGTCTC
AACAGAATAGCTATTTGAATGGCAATCTCCTGTGATACTGACATTGTTAA
AAGTGTAATGTACAAGAAGACCTTAGTTGCCATTAATCCTAAGTCCCTTC
CAATCCACAGGAATCCCCTCCATACAGGAGGACTTGCTGTATGAACGTCT
TCTGGCCTCGGCCCAAACATCTGACGACACCCCCCTCACCATCATCCCCA
CCATATTCGGCGAGCGACACATCCCAGACCAGCGGGCATCCGCGTCCAAC
ATCACGATCGACAGTCTCAGCGTTGGCCAGGTCACGCGCTCGCTCTGCAA
GGGCGTCGCTGACAACCTTCACGCCATGATGCCGCGAGAGTTCCTCACGG
AGTGTGGCGTGCAGAGGATTGTGGGTACGGGAAGTGCCCTCACGAGAAAC
GGGATCCTACAGGAAGAGTTAGAGAGGGCGTACGACATCCCCCTGGTGTA
TACTAAGACCACCTGCGGGGATGCTGCATATGGAGCGGCGTTTGCCATGT
TGTTGGAGATGCAGAAAAGATGAAGAAAATAATGACCTCGCTCCTGAGGT
GTCACAAAAAAAAGCACTCCACAGCCTTCATAGCAAAGCCTTCATAGCAC
AGGCTCTATGGCTGGTTTCTATGTCACTGTTTTTGCTGGTCATGTACACT
TATTTTCTGCATTCTGTTTTGATAGCTCCCATTTTCGAAAAATTTTATAT
GAAAACAGTATGTTATTAGCAAAAATGCCAATTGTAAAGTGCTTTTCAAA
GAGCCTGCTATGGTGGCTTGGTTGTTTTCATGTACAAGTGTGATTAGGAT
TGCTGTATGATGCAGTATAAGCCATCAAATTAATGTTACCTCCTTATTCC
AGAATAGCCATATTATTCCCATATATTATAACATATGCCAATACTGTAAG
GACCCTATCTTAATGGAGGTTTCGATTTCGGAGTGTGTGTCTGTCGTTAA
TGCAGTAGAGTGGTTGGTGTCCATTTGCTACATGTAGCCACATCTAGGAC
ACTGACAGAAAGTTAGGTCAAAAGTCCCAGAATAGCTAGGTTACATGTGG
ATCTCATCCCATGTCTTCAATTGCATCCTATAACTACGGTATGTCTGTTG
TCTTATGAGAGCCAGTGGGAAAATATTAGACGGAATCAGAAAGACAAGAC
AAGAAATTCACAAACCTAGAAATATTTCATGGCCGTATGAGATCTTTGAT
TTCATGTTATCGTTGTGCTTCGTTGCATTTTGTGTAAGTAGTTGATAAGG
AATCTGGATTGCAGAAGTTTGTTTAAGATTTTATTCTGATTTATTGATGA
AGTTGCCAAAATGCTGCTATGGTGTTCATTGAATTGAAATGTAAATACTC
AATAATTGGTCCAGTCTTTGAAATCTAAAGCCATGTATTTTAGAGAGAAG
TATTTGGCATTTGAGAAGTGTCATATTTCATTAGCTCTAATATCTCTGAT
GTATGCTTGTGAGGTTTTAATATGCAGATGAGTTGCTATTTTTGCTAATT
GTGGGAATTAGGCTAAAGCCAGTATGATTCAAAGTGTTTTAATGCACAGA
GTGCAGAATATGTCGGACAATTTGTAATGCTGTGACGTGCCAGGTTGTTG
TTTAAAAGTGCCATCCACATTTTTAATTTGAAATGAAAAGAATATTTACA
AACAGATTATTATATTTCTGATAGATATAGTACCAAGTGTGGGTCTGCGT
GTCTTTTTTGTTTTTTTTTGTTTTTTGTTTGTTTGTTTGTTGAAAAAGTC
AAACTGTGAAAGTTGTTTTGCATATAGGATTTTGGATTTATTCATAAAAT
TGAACTGGTGACTTACATTTCTATCAAACGTACACCTCTTAAAATAACCA
ATTGCAAAGTTAGGCAGGCTTGGCGTTGTACCTAACCCGACAAGCTGTTA
GGCGGTAACTGAGTTAGGCAGAAGTTCTGGGCAATATGGTCACCAGTTTC
TAGCAGCGGTCCTCCAATGAGTTAGGCACATTATATTATGGTCGCATGGA
GTCATCAGAGCTATTATGCCGTCCGATTAATTTGATGTACCTTAATGTCT
TCTTCATTACTGTCATTACGTCGACCTGTTGCATCTGTTAAGTACTGAAT
TCCTGAAACAGCCACTGTCGCGGGATAGTTAACCTGGCATTCAGTCTACC
ATGGTTTGGCCGGGCTCTCTTCGTGGTCGGCCAATTAAACTCCTATCACG
TAAAACTATTACCGTCCGGATACGTGTGCCAAATATTACCCCGACGGCAG
AGTGCCCCGAAGAGGCTAGTGCCTGACCGAACCACGTGCACGGTAGACTA
GATGCCAATTTAGGGGGATGTTTATTCGTTTTGCTTACAAGGCTACTTCT
GAACCCCTAGAGCTGGCATGTTATCAGGGCTATTTCATTACTACTTTGTT
TAAAAAACAGAATTAAGGGGCGCACAAAATCATAATAATAGGAAATATTT
CCATCCCTTTATTTTACGAAAGCATCTGGTATAGTCTCCCCTCCTCGTAC
TAAAAACCAATGCCAGGTTTCAGTTCCCATCTTTTTTAGGAAGTCGTGTT
TCAGGTCTTGTATCTGCTACTGTTATATGTTGTATGAATGGGAAACAAGA
AGAAACGATGATACTTTTCTAATTAATATCTACATCAAAACAATCCTGCA
ACTGAAGGGGGAATATACAGGGACAAACTCGTGAATTTGACAAAACCTCG
CATATTTTTATTCACTCGTATTTACTCGTATACATCGAAGCATCAAAGAT
CATGTCAGACTTTGAAGACATTATGAGTGCTTTAATTGTATCTATGATAT
TGAACTTAAATCTATAGCTAATACACAATGTAGAATAAACTGTACAACAG
AA Coding sequence (CDS) from alignment at Sc0000487:72571..80672- >Blg01952.0 ID=Blg01952.0|Name=Blg01952.0|organism=Branchiostoma lanceolatum|type=CDS|length=1467bp|location=Sequence derived from alignment at Sc0000487:72571..80672- (Branchiostoma lanceolatum)
ATGACCTTTATCATCATCAACATGGCTGCCCCGGTAGACGTTCCGAGCCC
GTACAGGGGTGTTTCGGCCCCGTATCGCACGATACTCGGCATCGACCTCG
GCACAACGTCCGTGAAAGTCTCCCTAGTGGACATGGACTCCTCCACGACC
ATTTTTTCCACGAGTCAGGAGACCGGAGCGACGGTAGGCTTCCCTACAGA
CCCGCGGGGTGACGAACAAGATGTCGCCAAGATCCTGACCTGTGTACAGG
ACTGTGTGGAGAAGATTCCGGAGGAGCTCGTTGCGGGGGTGACACGCATC
GGGGTGACCGGGCAGATGCACGGGGTGATGCTGTGGAGGGCCCGGGAGGG
CTGGCGCTACTCCCCGATGTCTCACCGCTTCGAGACGGGGAAGGTTAGCC
ACCTCTACACCTGGCAAGATGGCCGCTGCACCCCCGAGTTCCTCCAAACC
ATCCCCTCCCCCCGCGCGCACCTACCCGTTGCTACTGGTAACGGCTGTGC
GACGCTGCTGTGGCTGGCCAGGCACATGCCTGAGGCTCTGGAGGGGTTTG
ACCGGGCGGGGACAGTGATGGACTACCTGGTGGCGATGTTGTGCGGGATG
GAGCTACCGGTGATGTCCATACAGAACGCCGCCAGCTGGGGGTACTTTGA
CTGTGGCAGCAGGCTCTGGAACAGGGAAATTCTGGAGGAGGCAGGTTTCC
CGTGTGATGTCCTGCCCAGAGTGCTGGACCCGGGGGAGGTGGCTGGGACC
CTGCGGCAGCCCTGGTGCTGCGTGCCGCCTCGCATCGACGTGGGCGTGGC
CCTGGGGGACCTCCAGTGTTCCGTACTCCCCAGTCTAGTACAGAGGGGAG
ACGCAGTCCTTAACATAGGTACATCAGCCCAGCTGGCCTTCCAGATGACC
GGGGGGTTCCTGCCCCCTCCTGCCGACCCCTCCTCCCCGGTACAGTACTA
CCCGTACTTCAGGGGGCAGTACCTGGCCGTGGCCGCAGCGCTGACCGGGG
GGAACGCCCTGGCCTGCTTCGTCAAGATGATACAGAGCTGGCTGCAGGAC
CTGGGAATCCCCTCCATACAGGAGGACTTGCTGTATGAACGTCTTCTGGC
CTCGGCCCAAACATCTGACGACACCCCCCTCACCATCATCCCCACCATAT
TCGGCGAGCGACACATCCCAGACCAGCGGGCATCCGCGTCCAACATCACG
ATCGACAGTCTCAGCGTTGGCCAGGTCACGCGCTCGCTCTGCAAGGGCGT
CGCTGACAACCTTCACGCCATGATGCCGCGAGAGTTCCTCACGGAGTGTG
GCGTGCAGAGGATTGTGGGTACGGGAAGTGCCCTCACGAGAAACGGGATC
CTACAGGAAGAGTTAGAGAGGGCGTACGACATCCCCCTGGTGTATACTAA
GACCACCTGCGGGGATGCTGCATATGGAGCGGCGTTTGCCATGTTGTTGG
AGATGCAGAAAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01952.0-exon-Sc0000487-1570713199:80131..80672 | Blg01952.0-exon-Sc0000487-1570713199:80131..80672 | Branchiostoma lanceolatum | exon |
| Blg01952.0-exon-Sc0000487-1570713199:79461..79648 | Blg01952.0-exon-Sc0000487-1570713199:79461..79648 | Branchiostoma lanceolatum | exon |
| Blg01952.0-exon-Sc0000487-1570713199:78026..78201 | Blg01952.0-exon-Sc0000487-1570713199:78026..78201 | Branchiostoma lanceolatum | exon |
| Blg01952.0-exon-Sc0000487-1570713199:75982..76179 | Blg01952.0-exon-Sc0000487-1570713199:75982..76179 | Branchiostoma lanceolatum | exon |
| Blg01952.0-exon-Sc0000487-1570713199:72571..75312 | Blg01952.0-exon-Sc0000487-1570713199:72571..75312 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000487 | genome | Sc0000487:72571..80672 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01952 |
|
