Blg01746.7 (mRNA) - B. lanceolatum

Overview
NameBlg01746.7
Unique NameBlg01746.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000098:680341..689127-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01746.7 ID=Blg01746.7|Name=Blg01746.7|organism=Branchiostoma lanceolatum|type=mRNA|length=8787bp|location=Sequence derived from alignment at Sc0000098:680341..689127- (Branchiostoma lanceolatum)
GTCAGGTGGGTAGTGTTCTGATGCCACAACACGTCGACCTGCATTTCGGT CTTCTCGAATGAAGCAGTGAGCATCAGTGCAAACAAGCTACCCGCCCGGG CGCCTTCGTGAGAACAAGGGTAAAGGAAACATTACAGAAAGCCCCCTCGT CTCAACAGGTAAGTGCATGACATAACGCAGTGACGTTGTTTCACCGTGAG TCTCCATGTTTTTCACTGAAACGTGTAGTCGACATGATAACTGTCACATA CGTTGTTTGACAGATCTACAACAGCAAAGTAAGGACAGTCTTGCGACAGT CGTGGCCGTGTCGTACACAATCCAACTGTCTTGTTACGGAAAATCCGTCT TATTTACTGGTCGATGGCAGGTTCTGGCACAAAAAGTCTTCGAACGTGCG CGACTGTGCCTTGGTCTGATCTGATAGTGGTAACTGCCTGAGAGCTGGTG ACGTGAGAAAGGTACAGGAGTACTTTCTTTTCAGCTTACTGTTCATTGAC GTGAACTTGTAAGAATGTCGCCTAGCCAAAATGAAACAGGTATAGCCTGG AGGAAACCCTGAGGGCCAATTGTTGCAAAGTTACATATACATGTATGCAA TACATGTAACGTTACATGCATTTTAGACATACAACTGGCCGCTTCCAACA CACACAAACACGACTCACCTTACACACAAACATACTACCCGTCACTTTAG ACACATAAGTCAAAGCTCCACACACATATGACATATTATATATCCTGAGT CATCCATTCGTGGATCGTGCCACTTGTAGGACACTAAGGTGACAGAGTGC CACTCTCCACTACTGGAGCGTTTGAGTTCATACAAAACAACAACAGTACA GCAGCGGTCAGTTTTAAGTTACACCCCAAGCAGAGGTTCGGCTCCGGCTG GTTTTTGGCGTATTTTTAGGCGTAAAGAAACCCTGACAAAAGAGAAAGCC AGACAAAAACGCCTAAAATAGGTCAAAAGCAGGTCGTTGTCGAACCTCGG CTTGGAGAGTAGTTAGAAGTTACTCCCAGATAACATCGTCAATATCCAAA ACAAAGGGAAAAACCTGTTCCAAGCTAATTACGGAGTAATTAGAAAAGGG ATCTGCGTAGCTTTCTATTCCATGTTCCATTAATGACATGTAAACCCAAT CCCTCCAGCATGGTGTCTGTTCATTCATTGGGAAGTAATTGTACCCTTTT ATATGTATGTCACACTCGTTATTTTGGTGTTACTAATGGCAACGCTATAA TTATAGACTTTACATAGTCGATGACAAATGGCTTGATAGAATGGGTTGAC TTCTATGTCATCAGCGTTAATCAACGCCCTTGGTCACAGTATGCGTTAGT TGGGATGTCACTCATTCCGCATTCGCCCTAGTTACTCAAGTAAGTGGAGT GTTCGACAAGTGGCTCTTCAACACTCAATACAGCACAGGTTGCCTCTTCC ACTAATCAGGATTATACTGAGCAACAGGTTAGTTTTGAAGGTAAAGGCAA CACCATTGGCAGGCAACCAGACCTAGACAATATCCAAGGTACTATTTTGT ATAGAAAATGTCGATTCTGTAGAAACACATACATGTATCTTCCGCCATTT GTGAGATAAAATAAGTGAACGTGAATGGTCAGTTTGCGTGCGTCTTGGCG ACACAAGTCGACATGGAGGCTTAAGCTTCCAGCAGACCATAAGAGTACTG TGGGGATATGTAAACATATGTCTGCAATGTGGTGATGTTGTGACAGCATT TAGGTGTGTTCCTGACATTTCCGAACGGAAAACAGAGGGAACCCACGACT CCCAGATGGCGCACCTCATGACTACAGCTCCACCCACATTTTTACAGTGT TTCATAAACAAGGCTGAACTCTTACAGAGCAGGTATACTTTTCTTACAGA GGGGACCAAACCAAAAACAGGCCAGACGTTCACTAAGCTTAAGGTTCACA GAACAACGACGAAACCATGCAGGTCCTGAGTGTAGCCGCCATTCTGATGT TCCTGACAGGGAGCTTTGGCTCCACCGATCTGTCACAAGAACAGATCAAC ACCATCTTACAGGCGCACAACAACTACAGGAAAGCCGTCAACCCTACAGC TGCCAACATGGAGTATATGGTGAGGCCTTTTCTTGTCTTTCATCGTTACT TTCTCTTCGGTGTACAATTACGCCCATCCTAATCTATACTAAAGCACCTG TGAGGTTAACATGTAAGAGATAGTCCGACAATAGGTGATTAAAAAATTCC TGCATACGTTTAAGCACGCGATATTTTGTACACCAGCTTTTGATAATTAC AATACGGGATGGGGCTGTACAAAGTACATGATTGTACAGACATAATAACA GACTCTAGTGTAACTAATACGGACCGGACCCAACTCGACGTATTTCTGCA AAGGTCATTCGTATACAGCATTATCAAATGATTACGTTTTGCCAATCGAG CTTAAAGATCAACTCAGTAGTTTGAAAGTTTGCGCGGAGCTAGCTTGACT AAGTAAAGGTGACCTAACCACTTATGTATGTCCCTGTAACACTCCTGTGA TCACAGATCATGGCGTAAGAAAATAAGACCACAGGGAACACGTTCTTACT TAAAACAAGTACACGTGGTACGAGGTCCTGGTAGCACGTAGGTCTTAGAA GAATGGTAATGGAAGCTATCGAGATGTCATCATTTTCGGGAACTGTTTAA AAAGGGAGACTGTTCGTCCAAAAAAATGTATTGTCAACATTCCCTGTTTA ATAGGAAAATGAATGATTCAACTAGATGTAGTTTCGTCTTGAGTGTCCAT GTTTGAACCAGGGCCATTCTATCAGAGTTGTAACTGGTGCATTAGCATTG CAGACCGCACACTGTGTGCCCACTGGGAGTGATCCGATACCAAGAAGTGT TGTTGTAAAACGGGAAGAGCTTGTTTCCTAAACTAACCCGTGAAGAGTGT TTTTCGGGAAATATCACCCACCGCATGTTTCCGAAAGATAACATCTCGTA AAGAAAACTAAGGGCGTTGATATGGTTGGTCAGTTCAAGATGAGGCCATG TTGATTTGATTATATGGATGACATCCTCTGGGGACCCCAAAACTGGTGCG AGCGTGCAAATAAAAAAAAAGTTTGGTAAAAAAAAAAGTTGCCTTCATTA TGAAATCTACGTTGTCAGGAAGGATAAACAAAGTAAACACACCGAGTATG GTAGACCGAAATATAGATTCTTCATTTTTGTTCCTTCAAAACTTCTTCTT GGGCTTTGGAATTGACGTCGGCAATCTACGACATTAGTATCCGTTTTCTG AAATATGTTTTTGCAATTCATAGCATGTATTTTCTCATTTTGCAACTGCC TTTTACGATTTTAAGTATGGCCGAAAACTTTTATTTTGGGAAACGGACGA AAATTGACGCCCGCGCGAATGTCACCCATATAATTAAATCAACATGGCCT GACTTTGAAAAAGAGCCTGGTGCAAAAACACAAACATCACCGTATATATG AGAATGAGATGCATCGCCCGTATGTGACACTGCCCAAATCTAAAGTATGT CGACGGTCCAACTAATGTTATTTTTAACTTGTTTTGAGATGTGTAAAATG TGCCACACATTTTTGTTGTATAATGATGTTGAGATATAAAAATTCTACTG TATCATAAAGACAGAATATTACGGAAAGTTAATGTTTGAGGTTCGCGGAT TCAGTCATGAGTCACGTGAATAAAGGCATTGTGTTTAGAGATATACGAGA GACACGAAAGGTTAACTCAATGAGCTGTTAATATGATTGAAGCTTGTCAC GTATGACACGTCAAAATTTGCTGTTTGCACGCACTCTGAAAGTCGCCAGC CGCAACTTAACAATGGTGTACCTGCTACAAAAGACGGGCTTTCTCTATTG TGCGTAGTGTGAACTGGACTGCAAGTAAGATCTTCATGATTAAGCGAGTT GATAACTGTTATTATTTTGGCGTCGCAGTGGAAGTTTGGGTGTTTGGCCC AGAACCCAAACAATTCCAAGTTCCCGCGACTTAAATTGTCCCTCGGGGTT TGGCACTTGACACGAATTTCCTCACTTCGCTAAGGTAAACATGAGCACCT AGCTTCGGTTAGGGACGTCCCTCGGTTAGGACCATAAATGAAGGTCCCGT GTTTGGAAAGAGCCACGCCTCAAGCACGTAAAAGAACCCACCACACTTGT CGAAAAGAGTAGGGGTCCTTCCCGGTGTGAGTGGATCAAACCTTACAGTC TGGTCTGGTTTGACATCTTGAAAATGTGATAGCCACCTGTTATGTCAACC CTTCCACAAATGTGGAAGGGTTGACTAAATCTCAATAAACAAATGGGTTA TGACTATAATCATTATCATCACAACTAGCATAGGAATCTTTATCATCACT ATTAGTATTAGAAAATACCATCATGACTTCTATGTGCCGTATGTCTGTAC CTCTAAGGAGTGGGACGATAGCCTGGCGACCATAGCGCAGGGCTGGGCGG ACCGCTGTGACTTCGCACACAACCCGAACCCGGCGGCGAACTACGCCGGG TCGTCTGTAGGGGAGAACATCTACGCCGGCACTGGAAGGTTTGTCACTCT GTGTGTCGACTTTGTACCAAGTGGCATGGCCCTTCTGACAATAGCTTTAA GTTTTACCCGTACAAAATGCAACTTGATCCTGTACAACATTTTAGGCTTG AATGACGACATGTACATAGCAAGATATCTCATGATGCTAAGAATTGCACA ACTACTTCTCCATTATTACTTGGCCACTATGGAATAAGTGTTGGTATTAC ATAAAGCGGGTGCCTAGTAACATCTTAAATAAGATATAATCTTAGAAAAC AATTGATACACACAAGGTGTATTTACTAATATTAAGTGTAAATGTAAGTC GTAGAACAACAGCCAAAAGTGGCACTCTCACGTGATAGCATCTTCTATAT GAGAAATGTTCATCAGACATGGCAGTGTCTTGATATCTGTTGATTCTCAT GTTTTCACGGTAACACACGACAAATTCACAGCTACACTGCGGGCAAGGAA ACCGAGAACTGGAACGGTGAGGTGTCTGACTACACGTACAGCAGCAACTC GTGTAGGAGTGGCGCCGTCTGCGGACATTACACACAGGTACGGCCATACG ATGTCCTTCATTCGTGCATGTGTGAACGTGCGTGCGTGCGTGCGCGCGCG TGCGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG CGTGTATACGTGTGTGTACGTATCCCAGTTATGTCATTTTAACCAGGGCT TAAAATGAACGAGGGACCCGGTAACAAACACCGTGAGCTAATCGTACTAG CACCGGGAGGTACAACTAGCCAGCCCACACCCGAGAGTCAAAATTTGTGG CTTCGGGCCAGGCCGGGACTACAACCCCGACGGGCACCGACGCAATTGGG ACCGTAGCATTAGTCAAGATGTACATATAATATATAACTGCTTCCTCCTG TACACACTTTTACACCGGTACCGTTTCGCCTCCCGCCAGGTTGTGTGGGC CACCAGTAACAAGCTTGGGTGTGGCTGGAAGCTCTGTGGTACTCTCGCCA CTGTCAACTGGAACAACGCCAACCTAGTGGTCTGTAACTATGCCGCAGCG TAAGTCAGCAGCCTTTTATGGACTTGTGGTTTCTCACCCGTCTTTTATCT ATTTATTTATCTATTGGTTTGACTATTCAGCACACAGAGCCAGGGCTGCC CAACTGGCCTGTTGCTATTACAAAGGGCTAGCCCTGCTGACAGAGACAAG ACAAGACATTTACAGTGGAATTTTTACATAACGAGCTACAACAATATTCT AAGCACATGTACATACAAATTATTGTATATAAATGATCTAGAATAACGTC TATAATGGTATCTACGTCGAGAGGTCAGCTTCAGTGCGTATACATGTAAC TGCATTGTAAAGGTTGCCTAAACAGTCCCAGAGTTTCCTTTCTTCTAAAG GCGGTTACATTTCTGCAATGGTGTATCAATATTGACAAAGGATTGGGGTT TCTTTCATGTAATGTATATTAGCGAACCTTGGCTTATTTTCTTTTCCGTA TGTTGTCTGCAGTGGTAATTTTATTGGACAGAAGCCCTACGTCAGTGGCA CACCCTGCACACAGTGTGCGAACGGCAACGACAACTGCTCCGACAACTTG TGCGGTAAGGATCAACCATAAACAAACAAACAAACAAACAAACAAACCAT TTTACAGTAGTTAGTCCAGATAGAAACCGCAGCTGGTCAAATGTTTGCTG ATAGATTTTGGAAAGACACTTCATAACCAACACAAAGGTTAATGGCCAGT ATGATCTAACGTTATATTTGAATTCATAAACCTGTTACGCATCCAGCCGG GATACCTGTAAAAGCATATTTTACTACAATGTGGTATCGTGCAAGGCAGG TGATTTGATCATTCTTGCACATATATATGTGTTGTTCATGTATACATATA GACTTCAAACCTTTGGTTGTAACAAAGCCCTGATTATGAGTAAACCTACC TATCCACCCCCTGTTTTCAGGCAACCCGTCTGGTGGTGCTACCAGTGCCC CCAATGGCAATGGTGCAGGAGGTAAGTACCAACTGCAAGCCAAGCCTTGT TTTAGAGTCTCCCTTATGCTTAGGTCCAATTAATAGCGCCGGTGCCCGAA GCCACAAATTTCTCCCGTTGAACTGCCGGGTACTGCGGGGTGGGGGTGGG GGTGGGGTTGCGATGAGATTTACCTACCGCTGATCGCACGATTAGCCCAC GGCGTCTATTGTTATCGGGTCCCGCGTTGATTTTAACTCCGAGTTAAGAT GGTTCGGGGTCCCCGACCGGGCCCCAGAATGGCCCGGCAGCCGGGACCAC GTAGGAGACACGCCCAAAAGTGGAGAAAAAAAAACAGCCCGTCAACTACC CGGCGGACCCCCTTTTCCAATTGGGACCTAAGCCTTTAACAGCTCATTCG ACCGGAGAGACTCTAAAATTAATGTTGATAACTTATCAGGTTGTAGAACC TGTACACAGGTCGCCCACAGAGGGGGAAACACTACATCGCTGCCTGTTCT AAGATTGGTCACATGCAAGCATGTTTAATTTCTGCGACATGACACTACTA GTAATTCAATATCAAAGATTGTATAGTTGTTGATGTGTTGTTTTGATTAA CCTCAGTATTCTATGGTCATAACAATCGTTAATGTGACGCAGAATTGGCC GATGTTGACATCTATCTCATGCTAGAACTGCAGGATGAATATCTTAGTCC TCTCGATTTTGTTTTGATTGATAACTTCCCTTTGGTGTTGTTTTAGGTGG TGCGTCCAATACTACTGACACACCCAACGAGGGTGGAGGTAAGTGGTCAA GGCACAATTCTGTAGGAGAGATTGTAATGCACTTTTGATATTGCTTTAGG CAACAAGTACGTATTTATTTATTCTTTGCATCAGGCCCAGGGCCAATTTT GAAAGCAGCAAAGGCAATATACAGATATTTACATACAACACAGACATTGC ATATCAAATACTGTAGAAACATGCGGGCGGAAGGACCAGTCGACAATAAT AAGGCCAATGCCGGCTCAATGAAAAGACCTCGGAATGGCATAGCAGGTTA ATTATGCTCTGTTCAGACGCAAAGAATGGAAGTGGGTAGATCTAGAAGAA ACAAAACGGCCCGAGTATGTGACATATCATACCCTTAGTGTTCGATGCTA GTTTCTTTACATTGTATTGACATTTTGTTACAGATAACGGCGCTACTGCT ACTCGCCACTGGAGCATGCTGCCGCTAGGGGGCGTGATTGTGACGCTACT CATACTCAACATGCCATGATGAAGACTTGCATCGCATTCGTACATGTGGC CATACATTGCTTTTAAAACGGAAGGGATTCTCATAACCCCATTGTATTAG AGCATAATCATAATGTATATATATAACAAAGGTACTATTTGATGATATCT AAATTTAGTATTCTGTATCTATACAGCCGGTACTTCCGCCCTTTGGCGTA ACACACCAGCTTCGCACACACGTGGCACGGTTGCAGCTGATTACTAGCAT ATTACATCAAACGACCTGTAACATCTAATGTTCGTATATCTAATGGCATA CATTCTTTAAAGCGATCGAATTAGGATGCATCTACAGTACTAGACGATAA CGAGTTCTACCCTACGATAGTTCCAGAAAATGCGAATTTAAGTTCAACAC ATCAAGCCTAGGTTGATAAATCTGGTACTTGAAGGCATGACTATTTCTTG TTCATTTCTTAGCTGGTATAGGCATTTATTACTTAGTAGCGTGAAGTTTG TTTATGTGTCACGCGACTGACAATAATTTAACAGCAAAGTATACAAACAA AAGGAATAAGATAAAAACATGGGCAGAGCTGAAACTCGAGAGGCCACGTT ATTTCATCTGCTACTTCTTCTCATCGATCTTTGCATTAATTCATTGGCGT TTGTTAACAGAAGAGATAAAGGTAGAAATGCTATGTGTTAGGTCACGCAA TAAAGATATTTGACTGTCTTTGAATCGCCCAGAAGGCTTGATTAAGCTAA AATGTCAACAAATTCACTTTCTTATCTGTTTCATCGTTCAATGTGATATA CTTTAGGTTGACTCAATGTCTAATCACGTTGTAATCTACCTACATAAGCC AACTTTTCATTTCATTTTTGCCCAGGGTCAACATATCGCTGCTAGGGTGG TTTTCAATGTGCCCTGCAGGCATACTTAAACAAAACA

Coding sequence (CDS) from alignment at Sc0000098:680341..689127-

>Blg01746.7 ID=Blg01746.7|Name=Blg01746.7|organism=Branchiostoma lanceolatum|type=CDS|length=705bp|location=Sequence derived from alignment at Sc0000098:680341..689127- (Branchiostoma lanceolatum)
ATGCAGGTCCTGAGTGTAGCCGCCATTCTGATGTTCCTGACAGGGAGCTT
TGGCTCCACCGATCTGTCACAAGAACAGATCAACACCATCTTACAGGCGC
ACAACAACTACAGGAAAGCCGTCAACCCTACAGCTGCCAACATGGAGTAT
ATGGAGTGGGACGATAGCCTGGCGACCATAGCGCAGGGCTGGGCGGACCG
CTGTGACTTCGCACACAACCCGAACCCGGCGGCGAACTACGCCGGGTCGT
CTGTAGGGGAGAACATCTACGCCGGCACTGGAAGCTACACTGCGGGCAAG
GAAACCGAGAACTGGAACGGTGAGGTGTCTGACTACACGTACAGCAGCAA
CTCGTGTAGGAGTGGCGCCGTCTGCGGACATTACACACAGGTTGTGTGGG
CCACCAGTAACAAGCTTGGGTGTGGCTGGAAGCTCTGTGGTACTCTCGCC
ACTGTCAACTGGAACAACGCCAACCTAGTGGTCTGTAACTATGCCGCAGC
TGGTAATTTTATTGGACAGAAGCCCTACGTCAGTGGCACACCCTGCACAC
AGTGTGCGAACGGCAACGACAACTGCTCCGACAACTTGTGCGGCAACCCG
TCTGGTGGTGCTACCAGTGCCCCCAATGGCAATGGTGCAGGAGGTAAGTA
CCAACTGCAAGCCAAGCCTTGTTTTAGAGTCTCCCTTATGCTTAGGTCCA
ATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01746.7Blg01746.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01746.7-exon-Sc0000098-1570713199:688970..689127Blg01746.7-exon-Sc0000098-1570713199:688970..689127Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:687009..687228Blg01746.7-exon-Sc0000098-1570713199:687009..687228Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:684540..684670Blg01746.7-exon-Sc0000098-1570713199:684540..684670Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:683991..684096Blg01746.7-exon-Sc0000098-1570713199:683991..684096Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:683479..683588Blg01746.7-exon-Sc0000098-1570713199:683479..683588Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:682924..683015Blg01746.7-exon-Sc0000098-1570713199:682924..683015Branchiostoma lanceolatumexon
Blg01746.7-exon-Sc0000098-1570713199:680341..682557Blg01746.7-exon-Sc0000098-1570713199:680341..682557Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000098genomeSc0000098:680341..689127 -
Properties
Property NameValue
GeneIDBlg01746