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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:680341..689067- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01746.3 ID=Blg01746.3|Name=Blg01746.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8727bp|location=Sequence derived from alignment at Sc0000098:680341..689067- (Branchiostoma lanceolatum)
GAAGCAGTGAGCATCAGTGCAAACAAGCTACCCGCCCGGGCGCCTTCGTG
AGAACAAGGGTAAAGGAAACATTACAGAAAGCCCCCTCGTCTCAACAGGT
AAGTGCATGACATAACGCAGTGACGTTGTTTCACCGTGAGTCTCCATGTT
TTTCACTGAAACGTGTAGTCGACATGATAACTGTCACATACGTTGTTTGA
CAGATCTACAACAGCAAAGTAAGGACAGTCTTGCGACAGTCGTGGCCGTG
TCGTACACAATCCAACTGTCTTGTTACGGAAAATCCGTCTTATTTACTGG
TCGATGGCAGGTTCTGGCACAAAAAGTCTTCGAACGTGCGCGACTGTGCC
TTGGTCTGATCTGATAGTGGTAACTGCCTGAGAGCTGGTGACGTGAGAAA
GGTACAGGAGTACTTTCTTTTCAGCTTACTGTTCATTGACGTGAACTTGT
AAGAATGTCGCCTAGCCAAAATGAAACAGGTATAGCCTGGAGGAAACCCT
GAGGGCCAATTGTTGCAAAGTTACATATACATGTATGCAATACATGTAAC
GTTACATGCATTTTAGACATACAACTGGCCGCTTCCAACACACACAAACA
CGACTCACCTTACACACAAACATACTACCCGTCACTTTAGACACATAAGT
CAAAGCTCCACACACATATGACATATTATATATCCTGAGTCATCCATTCG
TGGATCGTGCCACTTGTAGGACACTAAGGTGACAGAGTGCCACTCTCCAC
TACTGGAGCGTTTGAGTTCATACAAAACAACAACAGTACAGCAGCGGTCA
GTTTTAAGTTACACCCCAAGCAGAGGTTCGGCTCCGGCTGGTTTTTGGCG
TATTTTTAGGCGTAAAGAAACCCTGACAAAAGAGAAAGCCAGACAAAAAC
GCCTAAAATAGGTCAAAAGCAGGTCGTTGTCGAACCTCGGCTTGGAGAGT
AGTTAGAAGTTACTCCCAGATAACATCGTCAATATCCAAAACAAAGGGAA
AAACCTGTTCCAAGCTAATTACGGAGTAATTAGAAAAGGGATCTGCGTAG
CTTTCTATTCCATGTTCCATTAATGACATGTAAACCCAATCCCTCCAGCA
TGGTGTCTGTTCATTCATTGGGAAGTAATTGTACCCTTTTATATGTATGT
CACACTCGTTATTTTGGTGTTACTAATGGCAACGCTATAATTATAGACTT
TACATAGTCGATGACAAATGGCTTGATAGAATGGGTTGACTTCTATGTCA
TCAGCGTTAATCAACGCCCTTGGTCACAGTATGCGTTAGTTGGGATGTCA
CTCATTCCGCATTCGCCCTAGTTACTCAAGTAAGTGGAGTGTTCGACAAG
TGGCTCTTCAACACTCAATACAGCACAGGTTGCCTCTTCCACTAATCAGG
ATTATACTGAGCAACAGGTTAGTTTTGAAGGTAAAGGCAACACCATTGGC
AGGCAACCAGACCTAGACAATATCCAAGGTACTATTTTGTATAGAAAATG
TCGATTCTGTAGAAACACATACATGTATCTTCCGCCATTTGTGAGATAAA
ATAAGTGAACGTGAATGGTCAGTTTGCGTGCGTCTTGGCGACACAAGTCG
ACATGGAGGCTTAAGCTTCCAGCAGACCATAAGAGTACTGTGGGGATATG
TAAACATATGTCTGCAATGTGGTGATGTTGTGACAGCATTTAGGTGTGTT
CCTGACATTTCCGAACGGAAAACAGAGGGAACCCACGACTCCCAGATGGC
GCACCTCATGACTACAGCTCCACCCACATTTTTACAGTGTTTCATAAACA
AGGCTGAACTCTTACAGAGCAGGTATACTTTTCTTACAGAGGGGACCAAA
CCAAAAACAGGCCAGACGTTCACTAAGCTTAAGGTTCACAGAACAACGAC
GAAACCATGCAGGTCCTGAGTGTAGCCGCCATTCTGATGTTCCTGACAGG
GAGCTTTGGCTCCACCGATCTGTCACAAGAACAGATCAACACCATCTTAC
AGGCGCACAACAACTACAGGAAAGCCGTCAACCCTACAGCTGCCAACATG
GAGTATATGGTGAGGCCTTTTCTTGTCTTTCATCGTTACTTTCTCTTCGG
TGTACAATTACGCCCATCCTAATCTATACTAAAGCACCTGTGAGGTTAAC
ATGTAAGAGATAGTCCGACAATAGGTGATTAAAAAATTCCTGCATACGTT
TAAGCACGCGATATTTTGTACACCAGCTTTTGATAATTACAATACGGGAT
GGGGCTGTACAAAGTACATGATTGTACAGACATAATAACAGACTCTAGTG
TAACTAATACGGACCGGACCCAACTCGACGTATTTCTGCAAAGGTCATTC
GTATACAGCATTATCAAATGATTACGTTTTGCCAATCGAGCTTAAAGATC
AACTCAGTAGTTTGAAAGTTTGCGCGGAGCTAGCTTGACTAAGTAAAGGT
GACCTAACCACTTATGTATGTCCCTGTAACACTCCTGTGATCACAGATCA
TGGCGTAAGAAAATAAGACCACAGGGAACACGTTCTTACTTAAAACAAGT
ACACGTGGTACGAGGTCCTGGTAGCACGTAGGTCTTAGAAGAATGGTAAT
GGAAGCTATCGAGATGTCATCATTTTCGGGAACTGTTTAAAAAGGGAGAC
TGTTCGTCCAAAAAAATGTATTGTCAACATTCCCTGTTTAATAGGAAAAT
GAATGATTCAACTAGATGTAGTTTCGTCTTGAGTGTCCATGTTTGAACCA
GGGCCATTCTATCAGAGTTGTAACTGGTGCATTAGCATTGCAGACCGCAC
ACTGTGTGCCCACTGGGAGTGATCCGATACCAAGAAGTGTTGTTGTAAAA
CGGGAAGAGCTTGTTTCCTAAACTAACCCGTGAAGAGTGTTTTTCGGGAA
ATATCACCCACCGCATGTTTCCGAAAGATAACATCTCGTAAAGAAAACTA
AGGGCGTTGATATGGTTGGTCAGTTCAAGATGAGGCCATGTTGATTTGAT
TATATGGATGACATCCTCTGGGGACCCCAAAACTGGTGCGAGCGTGCAAA
TAAAAAAAAAGTTTGGTAAAAAAAAAAGTTGCCTTCATTATGAAATCTAC
GTTGTCAGGAAGGATAAACAAAGTAAACACACCGAGTATGGTAGACCGAA
ATATAGATTCTTCATTTTTGTTCCTTCAAAACTTCTTCTTGGGCTTTGGA
ATTGACGTCGGCAATCTACGACATTAGTATCCGTTTTCTGAAATATGTTT
TTGCAATTCATAGCATGTATTTTCTCATTTTGCAACTGCCTTTTACGATT
TTAAGTATGGCCGAAAACTTTTATTTTGGGAAACGGACGAAAATTGACGC
CCGCGCGAATGTCACCCATATAATTAAATCAACATGGCCTGACTTTGAAA
AAGAGCCTGGTGCAAAAACACAAACATCACCGTATATATGAGAATGAGAT
GCATCGCCCGTATGTGACACTGCCCAAATCTAAAGTATGTCGACGGTCCA
ACTAATGTTATTTTTAACTTGTTTTGAGATGTGTAAAATGTGCCACACAT
TTTTGTTGTATAATGATGTTGAGATATAAAAATTCTACTGTATCATAAAG
ACAGAATATTACGGAAAGTTAATGTTTGAGGTTCGCGGATTCAGTCATGA
GTCACGTGAATAAAGGCATTGTGTTTAGAGATATACGAGAGACACGAAAG
GTTAACTCAATGAGCTGTTAATATGATTGAAGCTTGTCACGTATGACACG
TCAAAATTTGCTGTTTGCACGCACTCTGAAAGTCGCCAGCCGCAACTTAA
CAATGGTGTACCTGCTACAAAAGACGGGCTTTCTCTATTGTGCGTAGTGT
GAACTGGACTGCAAGTAAGATCTTCATGATTAAGCGAGTTGATAACTGTT
ATTATTTTGGCGTCGCAGTGGAAGTTTGGGTGTTTGGCCCAGAACCCAAA
CAATTCCAAGTTCCCGCGACTTAAATTGTCCCTCGGGGTTTGGCACTTGA
CACGAATTTCCTCACTTCGCTAAGGTAAACATGAGCACCTAGCTTCGGTT
AGGGACGTCCCTCGGTTAGGACCATAAATGAAGGTCCCGTGTTTGGAAAG
AGCCACGCCTCAAGCACGTAAAAGAACCCACCACACTTGTCGAAAAGAGT
AGGGGTCCTTCCCGGTGTGAGTGGATCAAACCTTACAGTCTGGTCTGGTT
TGACATCTTGAAAATGTGATAGCCACCTGTTATGTCAACCCTTCCACAAA
TGTGGAAGGGTTGACTAAATCTCAATAAACAAATGGGTTATGACTATAAT
CATTATCATCACAACTAGCATAGGAATCTTTATCATCACTATTAGTATTA
GAAAATACCATCATGACTTCTATGTGCCGTATGTCTGTACCTCTAAGGAG
TGGGACGATAGCCTGGCGACCATAGCGCAGGGCTGGGCGGACCGCTGTGA
CTTCGCACACAACCCGAACCCGGCGGCGAACTACGCCGGGTCGTCTGTAG
GGGAGAACATCTACGCCGGCACTGGAAGGTTTGTCACTCTGTGTGTCGAC
TTTGTACCAAGTGGCATGGCCCTTCTGACAATAGCTTTAAGTTTTACCCG
TACAAAATGCAACTTGATCCTGTACAACATTTTAGGCTTGAATGACGACA
TGTACATAGCAAGATATCTCATGATGCTAAGAATTGCACAACTACTTCTC
CATTATTACTTGGCCACTATGGAATAAGTGTTGGTATTACATAAAGCGGG
TGCCTAGTAACATCTTAAATAAGATATAATCTTAGAAAACAATTGATACA
CACAAGGTGTATTTACTAATATTAAGTGTAAATGTAAGTCGTAGAACAAC
AGCCAAAAGTGGCACTCTCACGTGATAGCATCTTCTATATGAGAAATGTT
CATCAGACATGGCAGTGTCTTGATATCTGTTGATTCTCATGTTTTCACGG
TAACACACGACAAATTCACAGCTACACTGCGGGCAAGGAAACCGAGAACT
GGAACGGTGAGGTGTCTGACTACACGTACAGCAGCAACTCGTGTAGGAGT
GGCGCCGTCTGCGGACATTACACACAGGTACGGCCATACGATGTCCTTCA
TTCGTGCATGTGTGAACGTGCGTGCGTGCGTGCGCGCGCGTGCGTGTGTG
CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTATACG
TGTGTGTACGTATCCCAGTTATGTCATTTTAACCAGGGCTTAAAATGAAC
GAGGGACCCGGTAACAAACACCGTGAGCTAATCGTACTAGCACCGGGAGG
TACAACTAGCCAGCCCACACCCGAGAGTCAAAATTTGTGGCTTCGGGCCA
GGCCGGGACTACAACCCCGACGGGCACCGACGCAATTGGGACCGTAGCAT
TAGTCAAGATGTACATATAATATATAACTGCTTCCTCCTGTACACACTTT
TACACCGGTACCGTTTCGCCTCCCGCCAGGTTGTGTGGGCCACCAGTAAC
AAGCTTGGGTGTGGCTGGAAGCTCTGTGGTACTCTCGCCACTGTCAACTG
GAACAACGCCAACCTAGTGGTCTGTAACTATGCCGCAGCGTAAGTCAGCA
GCCTTTTATGGACTTGTGGTTTCTCACCCGTCTTTTATCTATTTATTTAT
CTATTGGTTTGACTATTCAGCACACAGAGCCAGGGCTGCCCAACTGGCCT
GTTGCTATTACAAAGGGCTAGCCCTGCTGACAGAGACAAGACAAGACATT
TACAGTGGAATTTTTACATAACGAGCTACAACAATATTCTAAGCACATGT
ACATACAAATTATTGTATATAAATGATCTAGAATAACGTCTATAATGGTA
TCTACGTCGAGAGGTCAGCTTCAGTGCGTATACATGTAACTGCATTGTAA
AGGTTGCCTAAACAGTCCCAGAGTTTCCTTTCTTCTAAAGGCGGTTACAT
TTCTGCAATGGTGTATCAATATTGACAAAGGATTGGGGTTTCTTTCATGT
AATGTATATTAGCGAACCTTGGCTTATTTTCTTTTCCGTATGTTGTCTGC
AGTGGTAATTTTATTGGACAGAAGCCCTACGTCAGTGGCACACCCTGCAC
ACAGTGTGCGAACGGCAACGACAACTGCTCCGACAACTTGTGCGGTAAGG
ATCAACCATAAACAAACAAACAAACAAACAAACAAACCATTTTACAGTAG
TTAGTCCAGATAGAAACCGCAGCTGGTCAAATGTTTGCTGATAGATTTTG
GAAAGACACTTCATAACCAACACAAAGGTTAATGGCCAGTATGATCTAAC
GTTATATTTGAATTCATAAACCTGTTACGCATCCAGCCGGGATACCTGTA
AAAGCATATTTTACTACAATGTGGTATCGTGCAAGGCAGGTGATTTGATC
ATTCTTGCACATATATATGTGTTGTTCATGTATACATATAGACTTCAAAC
CTTTGGTTGTAACAAAGCCCTGATTATGAGTAAACCTACCTATCCACCCC
CTGTTTTCAGGCAACCCGTCTGGTGGTGCTACCAGTGCCCCCAATGGCAA
TGGTGCAGGAGGTAAGTACCAACTGCAAGCCAAGCCTTGTTTTAGAGTCT
CCCTTATGCTTAGGTCCAATTAATAGCGCCGGTGCCCGAAGCCACAAATT
TCTCCCGTTGAACTGCCGGGTACTGCGGGGTGGGGGTGGGGGTGGGGTTG
CGATGAGATTTACCTACCGCTGATCGCACGATTAGCCCACGGCGTCTATT
GTTATCGGGTCCCGCGTTGATTTTAACTCCGAGTTAAGATGGTTCGGGGT
CCCCGACCGGGCCCCAGAATGGCCCGGCAGCCGGGACCACGTAGGAGACA
CGCCCAAAAGTGGAGAAAAAAAAACAGCCCGTCAACTACCCGGCGGACCC
CCTTTTCCAATTGGGACCTAAGCCTTTAACAGCTCATTCGACCGGAGAGA
CTCTAAAATTAATGTTGATAACTTATCAGGTTGTAGAACCTGTACACAGG
TCGCCCACAGAGGGGGAAACACTACATCGCTGCCTGTTCTAAGATTGGTC
ACATGCAAGCATGTTTAATTTCTGCGACATGACACTACTAGTAATTCAAT
ATCAAAGATTGTATAGTTGTTGATGTGTTGTTTTGATTAACCTCAGTATT
CTATGGTCATAACAATCGTTAATGTGACGCAGAATTGGCCGATGTTGACA
TCTATCTCATGCTAGAACTGCAGGATGAATATCTTAGTCCTCTCGATTTT
GTTTTGATTGATAACTTCCCTTTGGTGTTGTTTTAGGTGGTGCGTCCAAT
ACTACTGACACACCCAACGAGGGTGGAGGTAAGTGGTCAAGGCACAATTC
TGTAGGAGAGATTGTAATGCACTTTTGATATTGCTTTAGGCAACAAGTAC
GTATTTATTTATTCTTTGCATCAGGCCCAGGGCCAATTTTGAAAGCAGCA
AAGGCAATATACAGATATTTACATACAACACAGACATTGCATATCAAATA
CTGTAGAAACATGCGGGCGGAAGGACCAGTCGACAATAATAAGGCCAATG
CCGGCTCAATGAAAAGACCTCGGAATGGCATAGCAGGTTAATTATGCTCT
GTTCAGACGCAAAGAATGGAAGTGGGTAGATCTAGAAGAAACAAAACGGC
CCGAGTATGTGACATATCATACCCTTAGTGTTCGATGCTAGTTTCTTTAC
ATTGTATTGACATTTTGTTACAGATAACGGCGCTACTGCTACTCGCCACT
GGAGCATGCTGCCGCTAGGGGGCGTGATTGTGACGCTACTCATACTCAAC
ATGCCATGATGAAGACTTGCATCGCATTCGTACATGTGGCCATACATTGC
TTTTAAAACGGAAGGGATTCTCATAACCCCATTGTATTAGAGCATAATCA
TAATGTATATATATAACAAAGGTACTATTTGATGATATCTAAATTTAGTA
TTCTGTATCTATACAGCCGGTACTTCCGCCCTTTGGCGTAACACACCAGC
TTCGCACACACGTGGCACGGTTGCAGCTGATTACTAGCATATTACATCAA
ACGACCTGTAACATCTAATGTTCGTATATCTAATGGCATACATTCTTTAA
AGCGATCGAATTAGGATGCATCTACAGTACTAGACGATAACGAGTTCTAC
CCTACGATAGTTCCAGAAAATGCGAATTTAAGTTCAACACATCAAGCCTA
GGTTGATAAATCTGGTACTTGAAGGCATGACTATTTCTTGTTCATTTCTT
AGCTGGTATAGGCATTTATTACTTAGTAGCGTGAAGTTTGTTTATGTGTC
ACGCGACTGACAATAATTTAACAGCAAAGTATACAAACAAAAGGAATAAG
ATAAAAACATGGGCAGAGCTGAAACTCGAGAGGCCACGTTATTTCATCTG
CTACTTCTTCTCATCGATCTTTGCATTAATTCATTGGCGTTTGTTAACAG
AAGAGATAAAGGTAGAAATGCTATGTGTTAGGTCACGCAATAAAGATATT
TGACTGTCTTTGAATCGCCCAGAAGGCTTGATTAAGCTAAAATGTCAACA
AATTCACTTTCTTATCTGTTTCATCGTTCAATGTGATATACTTTAGGTTG
ACTCAATGTCTAATCACGTTGTAATCTACCTACATAAGCCAACTTTTCAT
TTCATTTTTGCCCAGGGTCAACATATCGCTGCTAGGGTGGTTTTCAATGT
GCCCTGCAGGCATACTTAAACAAAACA Coding sequence (CDS) from alignment at Sc0000098:680341..689067- >Blg01746.3 ID=Blg01746.3|Name=Blg01746.3|organism=Branchiostoma lanceolatum|type=CDS|length=771bp|location=Sequence derived from alignment at Sc0000098:680341..689067- (Branchiostoma lanceolatum)
ATGCAGGTCCTGAGTGTAGCCGCCATTCTGATGTTCCTGACAGGGAGCTT
TGGCTCCACCGATCTGTCACAAGAACAGATCAACACCATCTTACAGGCGC
ACAACAACTACAGGAAAGCCGTCAACCCTACAGCTGCCAACATGGAGTAT
ATGGAGTGGGACGATAGCCTGGCGACCATAGCGCAGGGCTGGGCGGACCG
CTGTGACTTCGCACACAACCCGAACCCGGCGGCGAACTACGCCGGGTCGT
CTGTAGGGGAGAACATCTACGCCGGCACTGGAAGCTACACTGCGGGCAAG
GAAACCGAGAACTGGAACGGTGAGGTGTCTGACTACACGTACAGCAGCAA
CTCGTGTAGGAGTGGCGCCGTCTGCGGACATTACACACAGGTTGTGTGGG
CCACCAGTAACAAGCTTGGGTGTGGCTGGAAGCTCTGTGGTACTCTCGCC
ACTGTCAACTGGAACAACGCCAACCTAGTGGTCTGTAACTATGCCGCAGC
TGGTAATTTTATTGGACAGAAGCCCTACGTCAGTGGCACACCCTGCACAC
AGTGTGCGAACGGCAACGACAACTGCTCCGACAACTTGTGCGGCAACCCG
TCTGGTGGTGCTACCAGTGCCCCCAATGGCAATGGTGCAGGAGGTGGTGC
GTCCAATACTACTGACACACCCAACGAGGGTGGAGATAACGGCGCTACTG
CTACTCGCCACTGGAGCATGCTGCCGCTAGGGGGCGTGATTGTGACGCTA
CTCATACTCAACATGCCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01746.3-exon-Sc0000098-1570713199:688970..689067 | Blg01746.3-exon-Sc0000098-1570713199:688970..689067 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:687009..687228 | Blg01746.3-exon-Sc0000098-1570713199:687009..687228 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:684540..684670 | Blg01746.3-exon-Sc0000098-1570713199:684540..684670 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:683991..684096 | Blg01746.3-exon-Sc0000098-1570713199:683991..684096 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:683479..683588 | Blg01746.3-exon-Sc0000098-1570713199:683479..683588 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:682924..683015 | Blg01746.3-exon-Sc0000098-1570713199:682924..683015 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:682507..682557 | Blg01746.3-exon-Sc0000098-1570713199:682507..682557 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:681740..681781 | Blg01746.3-exon-Sc0000098-1570713199:681740..681781 | Branchiostoma lanceolatum | exon |
| Blg01746.3-exon-Sc0000098-1570713199:680341..681344 | Blg01746.3-exon-Sc0000098-1570713199:680341..681344 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:680341..689067 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01746 |
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